RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 GOT1P17174 413 aa18.34■□□□□ 0.53
SSBP1-215ENST00000612337 ABCB4P21439 1286 aa18.34■□□□□ 0.53
SSBP1-215ENST00000612337 CCR1P32246 355 aa18.34■□□□□ 0.53
SSBP1-215ENST00000612337 NNMTP40261 264 aa18.34■□□□□ 0.53
SSBP1-215ENST00000612337 USP8P40818 1118 aa18.34■□□□□ 0.53
SSBP1-215ENST00000612337 C21orf59P57076 290 aa18.34■□□□□ 0.53
SSBP1-215ENST00000612337 SULT2A1Q06520 285 aa18.34■□□□□ 0.53
SSBP1-215ENST00000612337 EXOC3L4Q17RC7 722 aa18.34■□□□□ 0.53
SSBP1-215ENST00000612337 SMYD5Q6GMV2 418 aa18.34■□□□□ 0.53
SSBP1-215ENST00000612337 SND1Q7KZF4 910 aaKnown RBP eCLIP18.34■□□□□ 0.531e-16■■□□□ 13.8
SSBP1-215ENST00000612337 TMPRSS7Q7RTY8 843 aa18.34■□□□□ 0.53
SSBP1-215ENST00000612337 DEFB106AQ8N104 65 aa18.34■□□□□ 0.53
SSBP1-215ENST00000612337 CCAR2Q8N163 923 aaKnown RBP18.34■□□□□ 0.53
SSBP1-215ENST00000612337 STK40Q8N2I9 435 aa18.34■□□□□ 0.53
SSBP1-215ENST00000612337 AADATQ8N5Z0 425 aa18.34■□□□□ 0.53
SSBP1-215ENST00000612337 SHC3Q92529 594 aa18.34■□□□□ 0.53
SSBP1-215ENST00000612337 PTPRN2Q92932 1015 aa18.34■□□□□ 0.53
SSBP1-215ENST00000612337 PPP1R13BQ96KQ4 1090 aa18.34■□□□□ 0.53
SSBP1-215ENST00000612337 SLC6A18Q96N87 628 aa18.34■□□□□ 0.53
SSBP1-215ENST00000612337 CPXM1Q96SM3 734 aa18.34■□□□□ 0.53
SSBP1-215ENST00000612337 EBF2Q9HAK2 575 aa18.34■□□□□ 0.53
SSBP1-215ENST00000612337 KIAA1468Q9P260 1216 aa18.34■□□□□ 0.53
SSBP1-215ENST00000612337 PCDHGC3Q9UN70 934 aa18.34■□□□□ 0.53
SSBP1-215ENST00000612337 ATRXP46100 2492 aa18.33■□□□□ 0.53
SSBP1-215ENST00000612337 TP53BP1Q12888 1972 aaPredicted RBP18.33■□□□□ 0.53
SSBP1-215ENST00000612337 APC2O95996 2303 aa18.33■□□□□ 0.53
SSBP1-215ENST00000612337 A0A1B0GVM2 712 aa18.33■□□□□ 0.52
SSBP1-215ENST00000612337 GTPBP10A4D1E9 387 aaKnown RBP18.33■□□□□ 0.52
SSBP1-215ENST00000612337 TCAF2A6NFQ2 919 aa18.33■□□□□ 0.52
SSBP1-215ENST00000612337 HSF2BPO75031 334 aa18.33■□□□□ 0.52
SSBP1-215ENST00000612337 C5AR1P21730 350 aa18.33■□□□□ 0.52
SSBP1-215ENST00000612337 PSMD8P48556 350 aa18.33■□□□□ 0.52
SSBP1-215ENST00000612337 STK19P49842 368 aaPredicted RBP18.33■□□□□ 0.52
SSBP1-215ENST00000612337 CCR5P51681 352 aa18.33■□□□□ 0.52
SSBP1-215ENST00000612337 PLK1P53350 603 aa18.33■□□□□ 0.52
SSBP1-215ENST00000612337 OXCT1P55809 520 aa18.33■□□□□ 0.52
SSBP1-215ENST00000612337 APBA1Q02410 837 aa18.33■□□□□ 0.52
SSBP1-215ENST00000612337 ELAVL3Q14576 367 aaKnown RBP18.33■□□□□ 0.52
SSBP1-215ENST00000612337 EFHC1Q5JVL4 640 aa18.33■□□□□ 0.52
SSBP1-215ENST00000612337 RABGAP1LQ5R372 815 aa18.33■□□□□ 0.52
SSBP1-215ENST00000612337 CREBRFQ8IUR6 639 aa18.33■□□□□ 0.52
SSBP1-215ENST00000612337 SKA1Q96BD8 255 aa18.33■□□□□ 0.52
SSBP1-215ENST00000612337 DDIT4Q9NX09 232 aa18.33■□□□□ 0.52
SSBP1-215ENST00000612337 TPX2Q9ULW0 747 aaKnown RBP18.33■□□□□ 0.52
SSBP1-215ENST00000612337 GOLGA4Q13439 2230 aaKnown RBP18.33■□□□□ 0.52
SSBP1-215ENST00000612337 TNFSF14O43557 240 aa18.32■□□□□ 0.52
SSBP1-215ENST00000612337 PDGFRAP16234 1089 aa18.32■□□□□ 0.52
SSBP1-215ENST00000612337 PON1P27169 355 aa18.32■□□□□ 0.52
SSBP1-215ENST00000612337 MZF1P28698 734 aaPredicted RBP18.32■□□□□ 0.52
SSBP1-215ENST00000612337 VASPP50552 380 aaPredicted RBP18.32■□□□□ 0.52
SSBP1-215ENST00000612337 ADPRHP54922 357 aa18.32■□□□□ 0.52
SSBP1-215ENST00000612337 MTA1Q13330 715 aa18.32■□□□□ 0.52
SSBP1-215ENST00000612337 KCNJ12Q14500 433 aa18.32■□□□□ 0.52
SSBP1-215ENST00000612337 INAVAQ3KP66 663 aa18.32■□□□□ 0.52
SSBP1-215ENST00000612337 CXorf57Q6NSI4 855 aaKnown RBP18.32■□□□□ 0.52
SSBP1-215ENST00000612337 FBXL22Q6P050 247 aa18.32■□□□□ 0.52
SSBP1-215ENST00000612337 CIR1Q86X95 450 aaPredicted RBP18.32■□□□□ 0.52
SSBP1-215ENST00000612337 IRF2BP1Q8IU81 584 aa18.32■□□□□ 0.52
SSBP1-215ENST00000612337 PASD1Q8IV76 773 aa18.32■□□□□ 0.52
SSBP1-215ENST00000612337 RNF34Q969K3 372 aa18.32■□□□□ 0.52
SSBP1-215ENST00000612337 NOX5Q96PH1 765 aa18.32■□□□□ 0.52
SSBP1-215ENST00000612337 PPP1R9BQ96SB3 815 aa18.32■□□□□ 0.52
SSBP1-215ENST00000612337 CCDC86Q9H6F5 360 aaKnown RBP18.32■□□□□ 0.52
SSBP1-215ENST00000612337 SYNJ2BP-COX16A0A087WUM0 186 aa18.31■□□□□ 0.52
SSBP1-215ENST00000612337 A0A1B0GTQ1 180 aa18.31■□□□□ 0.52
SSBP1-215ENST00000612337 GRAP2O75791 330 aa18.31■□□□□ 0.52
SSBP1-215ENST00000612337 IL1BP01584 269 aa18.31■□□□□ 0.52
SSBP1-215ENST00000612337 WNT1P04628 370 aa18.31■□□□□ 0.52
SSBP1-215ENST00000612337 IL9RQ01113 521 aa18.31■□□□□ 0.52
SSBP1-215ENST00000612337 PTK2Q05397 1052 aa18.31■□□□□ 0.52
SSBP1-215ENST00000612337 CAMK4Q16566 473 aa18.31■□□□□ 0.52
SSBP1-215ENST00000612337 C11orf57Q6ZUT1 292 aaPredicted RBP18.31■□□□□ 0.52
SSBP1-215ENST00000612337 FAM183BPQ6ZVS7 135 aa18.31■□□□□ 0.52
SSBP1-215ENST00000612337 OR14C36Q8NHC7 312 aa18.31■□□□□ 0.52
SSBP1-215ENST00000612337 FRS2Q8WU20 508 aa18.31■□□□□ 0.52
SSBP1-215ENST00000612337 RPRD1AQ96P16 312 aaPredicted RBP18.31■□□□□ 0.52
SSBP1-215ENST00000612337 SPAG5Q96R06 1193 aa18.31■□□□□ 0.52
SSBP1-215ENST00000612337 ELF4Q99607 663 aaPredicted RBP18.31■□□□□ 0.52
SSBP1-215ENST00000612337 COX16Q9P0S2 106 aa18.31■□□□□ 0.52
SSBP1-215ENST00000612337 LOC400499M0QZD8 3231 aa18.3■□□□□ 0.52
SSBP1-215ENST00000612337 SMG1Q96Q15 3661 aaKnown RBP18.3■□□□□ 0.52
SSBP1-215ENST00000612337 GOLGA8CPA6NN73 597 aa18.3■□□□□ 0.52
SSBP1-215ENST00000612337 VAV1P15498 845 aa18.3■□□□□ 0.52
SSBP1-215ENST00000612337 CD38P28907 300 aa18.3■□□□□ 0.52
SSBP1-215ENST00000612337 NUMBP49757 651 aa18.3■□□□□ 0.52
SSBP1-215ENST00000612337 SNX16P57768 344 aa18.3■□□□□ 0.52
SSBP1-215ENST00000612337 AUHQ13825 339 aaKnown RBP18.3■□□□□ 0.52
SSBP1-215ENST00000612337 OR6B2Q6IFH4 312 aa18.3■□□□□ 0.52
SSBP1-215ENST00000612337 LRSAM1Q6UWE0 723 aa18.3■□□□□ 0.52
SSBP1-215ENST00000612337 OLFML1Q6UWY5 402 aa18.3■□□□□ 0.52
SSBP1-215ENST00000612337 GALNT15Q8N3T1 639 aa18.3■□□□□ 0.52
SSBP1-215ENST00000612337 C1orf131Q8NDD1 294 aaKnown RBP18.3■□□□□ 0.52
SSBP1-215ENST00000612337 FAM131CQ96AQ9 280 aa18.3■□□□□ 0.52
SSBP1-215ENST00000612337 ALG14Q96F25 216 aa18.3■□□□□ 0.52
SSBP1-215ENST00000612337 AASDHPPTQ9NRN7 309 aa18.3■□□□□ 0.52
SSBP1-215ENST00000612337 LHX6Q9UPM6 363 aa18.3■□□□□ 0.52
SSBP1-215ENST00000612337 COL5A1P20908 1838 aaPredicted RBP18.29■□□□□ 0.52
SSBP1-215ENST00000612337 A0A1W2PR77 199 aa18.29■□□□□ 0.52
SSBP1-215ENST00000612337 LATO43561 262 aa18.29■□□□□ 0.52
SSBP1-215ENST00000612337 ATP9BO43861 1147 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms