RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 ARHGAP1Q07960 439 aa14.37□□□□□ -0.11
COL6A1-207ENST00000612273 KLF10Q13118 480 aa14.37□□□□□ -0.11
COL6A1-207ENST00000612273 CTBP1Q13363 440 aa14.37□□□□□ -0.11
COL6A1-207ENST00000612273 PKDCCQ504Y2 493 aa14.37□□□□□ -0.11
COL6A1-207ENST00000612273 FBXO47Q5MNV8 452 aa14.37□□□□□ -0.11
COL6A1-207ENST00000612273 ARMC3Q5W041 872 aa14.37□□□□□ -0.11
COL6A1-207ENST00000612273 CWF19L1Q69YN2 538 aaKnown RBP14.37□□□□□ -0.11
COL6A1-207ENST00000612273 SIX6OS1Q8N1H7 587 aa14.37□□□□□ -0.11
COL6A1-207ENST00000612273 TTC16Q8NEE8 873 aa14.37□□□□□ -0.11
COL6A1-207ENST00000612273 BEST2Q8NFU1 509 aa14.37□□□□□ -0.11
COL6A1-207ENST00000612273 CMTM5Q96DZ9 223 aa14.37□□□□□ -0.11
COL6A1-207ENST00000612273 COPS7BQ9H9Q2 264 aaPredicted RBP14.37□□□□□ -0.11
COL6A1-207ENST00000612273 TCF7L2Q9NQB0 619 aa14.37□□□□□ -0.11
COL6A1-207ENST00000612273 BFARQ9NZS9 450 aa14.37□□□□□ -0.11
COL6A1-207ENST00000612273 KPNA7A9QM74 516 aa14.36□□□□□ -0.11
COL6A1-207ENST00000612273 BUD23O43709 281 aaKnown RBP14.36□□□□□ -0.11
COL6A1-207ENST00000612273 VCLP18206 1134 aa14.36□□□□□ -0.11
COL6A1-207ENST00000612273 PLK1P53350 603 aa14.36□□□□□ -0.11
COL6A1-207ENST00000612273 BCAT1P54687 386 aa14.36□□□□□ -0.11
COL6A1-207ENST00000612273 NIPAL4Q0D2K0 466 aa14.36□□□□□ -0.11
COL6A1-207ENST00000612273 GRIK4Q16099 956 aa14.36□□□□□ -0.11
COL6A1-207ENST00000612273 RWDD4Q6NW29 188 aaKnown RBP14.36□□□□□ -0.11
COL6A1-207ENST00000612273 LAYNQ6UX15 382 aa14.36□□□□□ -0.11
COL6A1-207ENST00000612273 EXOC8Q8IYI6 725 aa14.36□□□□□ -0.11
COL6A1-207ENST00000612273 SPATA22Q8NHS9 363 aa14.36□□□□□ -0.11
COL6A1-207ENST00000612273 ZFP42Q96MM3 310 aa14.36□□□□□ -0.11
COL6A1-207ENST00000612273 RHOBTB2Q9BYZ6 727 aa14.36□□□□□ -0.11
COL6A1-207ENST00000612273 KLHL4Q9C0H6 718 aa14.36□□□□□ -0.11
COL6A1-207ENST00000612273 CYP4F12Q9HCS2 524 aa14.36□□□□□ -0.11
COL6A1-207ENST00000612273 ANLNQ9NQW6 1124 aa14.36□□□□□ -0.11
COL6A1-207ENST00000612273 FZD9O00144 591 aa14.36□□□□□ -0.11
COL6A1-207ENST00000612273 PIGNO95427 931 aa14.36□□□□□ -0.11
COL6A1-207ENST00000612273 ZFXP17010 805 aaPredicted RBP14.36□□□□□ -0.11
COL6A1-207ENST00000612273 SOX4Q06945 474 aaPredicted RBP14.36□□□□□ -0.11
COL6A1-207ENST00000612273 MSLNQ13421 630 aaPredicted RBP14.36□□□□□ -0.11
COL6A1-207ENST00000612273 USP10Q14694 798 aaKnown RBP14.36□□□□□ -0.11
COL6A1-207ENST00000612273 POU6F1Q14863 301 aa14.36□□□□□ -0.11
COL6A1-207ENST00000612273 CNPY1Q3B7I2 92 aa14.36□□□□□ -0.11
COL6A1-207ENST00000612273 PRAMEF19Q5SWL8 479 aa14.36□□□□□ -0.11
COL6A1-207ENST00000612273 LRRC8BQ6P9F7 803 aa14.36□□□□□ -0.11
COL6A1-207ENST00000612273 MARK2Q7KZI7 788 aaKnown RBP14.36□□□□□ -0.11
COL6A1-207ENST00000612273 SLC26A9Q7LBE3 791 aa14.36□□□□□ -0.11
COL6A1-207ENST00000612273 OTOP3Q7RTS5 596 aa14.36□□□□□ -0.11
COL6A1-207ENST00000612273 ANKRD52Q8NB46 1076 aa14.36□□□□□ -0.11
COL6A1-207ENST00000612273 KCTD4Q8WVF5 259 aa14.36□□□□□ -0.11
COL6A1-207ENST00000612273 PPP2R3CQ969Q6 453 aa14.36□□□□□ -0.11
COL6A1-207ENST00000612273 RCN3Q96D15 328 aa14.36□□□□□ -0.11
COL6A1-207ENST00000612273 DNAJC1Q96KC8 554 aaKnown RBP14.36□□□□□ -0.11
COL6A1-207ENST00000612273 NUDT5Q9UKK9 219 aa14.36□□□□□ -0.11
COL6A1-207ENST00000612273 KIAA1257Q9ULG3 409 aa14.36□□□□□ -0.11
COL6A1-207ENST00000612273 NEMP2A6NFY4 417 aa14.35□□□□□ -0.11
COL6A1-207ENST00000612273 NRP1O14786 923 aa14.35□□□□□ -0.11
COL6A1-207ENST00000612273 NCAM1P13591 858 aa14.35□□□□□ -0.11
COL6A1-207ENST00000612273 TSPAN8P19075 237 aa14.35□□□□□ -0.11
COL6A1-207ENST00000612273 NMBRP28336 390 aa14.35□□□□□ -0.11
COL6A1-207ENST00000612273 GARSP41250 739 aaKnown RBP14.35□□□□□ -0.11
COL6A1-207ENST00000612273 C9orf57Q5W0N0 161 aa14.35□□□□□ -0.11
COL6A1-207ENST00000612273 GALNT15Q8N3T1 639 aa14.35□□□□□ -0.11
COL6A1-207ENST00000612273 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.35□□□□□ -0.11
COL6A1-207ENST00000612273 APPL2Q8NEU8 664 aa14.35□□□□□ -0.11
COL6A1-207ENST00000612273 FERMT1Q9BQL6 677 aa14.35□□□□□ -0.11
COL6A1-207ENST00000612273 SUDS3Q9H7L9 328 aaPredicted RBP14.35□□□□□ -0.11
COL6A1-207ENST00000612273 BPTFQ12830 3046 aa14.35□□□□□ -0.11
COL6A1-207ENST00000612273 NFKB1P19838 968 aa14.35□□□□□ -0.11
COL6A1-207ENST00000612273 CALRP27797 417 aaKnown RBP14.35□□□□□ -0.11
COL6A1-207ENST00000612273 HOXA11P31270 313 aaPredicted RBP14.35□□□□□ -0.11
COL6A1-207ENST00000612273 NR2C2P49116 596 aa14.35□□□□□ -0.11
COL6A1-207ENST00000612273 POU5F1BQ06416 359 aa14.35□□□□□ -0.11
COL6A1-207ENST00000612273 MPP3Q13368 585 aa14.35□□□□□ -0.11
COL6A1-207ENST00000612273 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.35□□□□□ -0.11
COL6A1-207ENST00000612273 NLGN2Q8NFZ4 835 aa14.35□□□□□ -0.11
COL6A1-207ENST00000612273 URGCPQ8TCY9 931 aa14.35□□□□□ -0.11
COL6A1-207ENST00000612273 DCPSQ96C86 337 aaKnown RBP14.35□□□□□ -0.11
COL6A1-207ENST00000612273 VPS33BQ9H267 617 aa14.35□□□□□ -0.11
COL6A1-207ENST00000612273 SEMA6AQ9H2E6 1030 aa14.35□□□□□ -0.11
COL6A1-207ENST00000612273 NMRAL1Q9HBL8 299 aa14.35□□□□□ -0.11
COL6A1-207ENST00000612273 DDIT4Q9NX09 232 aa14.35□□□□□ -0.11
COL6A1-207ENST00000612273 ARHGAP26Q9UNA1 814 aa14.35□□□□□ -0.11
COL6A1-207ENST00000612273 DPYSL4O14531 572 aa14.35□□□□□ -0.11
COL6A1-207ENST00000612273 FKBP6O75344 327 aa14.35□□□□□ -0.11
COL6A1-207ENST00000612273 SPATA31D3P0C874 917 aa14.35□□□□□ -0.11
COL6A1-207ENST00000612273 XRCC1P18887 633 aaPredicted RBP14.35□□□□□ -0.11
COL6A1-207ENST00000612273 HDCP19113 662 aa14.35□□□□□ -0.11
COL6A1-207ENST00000612273 FGFR3P22607 806 aa14.35□□□□□ -0.11
COL6A1-207ENST00000612273 FDFT1P37268 417 aa14.35□□□□□ -0.11
COL6A1-207ENST00000612273 GRIA2P42262 883 aa14.35□□□□□ -0.11
COL6A1-207ENST00000612273 MATKP42679 507 aa14.35□□□□□ -0.11
COL6A1-207ENST00000612273 TKTL1P51854 596 aa14.35□□□□□ -0.11
COL6A1-207ENST00000612273 THOP1P52888 689 aa14.35□□□□□ -0.11
COL6A1-207ENST00000612273 TPI1P60174 286 aa14.35□□□□□ -0.11
COL6A1-207ENST00000612273 ROR2Q01974 943 aaKnown RBP14.35□□□□□ -0.11
COL6A1-207ENST00000612273 GRM3Q14832 879 aa14.35□□□□□ -0.11
COL6A1-207ENST00000612273 ARL13AQ5H913 290 aaPredicted RBP14.35□□□□□ -0.11
COL6A1-207ENST00000612273 WSCD1Q658N2 575 aa14.35□□□□□ -0.11
COL6A1-207ENST00000612273 FBXL19Q6PCT2 694 aa14.35□□□□□ -0.11
COL6A1-207ENST00000612273 SPATA31D4Q6ZUB0 917 aa14.35□□□□□ -0.11
COL6A1-207ENST00000612273 DENND6AQ8IWF6 608 aa14.35□□□□□ -0.11
COL6A1-207ENST00000612273 ST13P4Q8IZP2 240 aaPredicted RBP14.35□□□□□ -0.11
COL6A1-207ENST00000612273 ICA1LQ8NDH6 482 aa14.35□□□□□ -0.11
COL6A1-207ENST00000612273 KBTBD7Q8WVZ9 684 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms