RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 PTAR1Q7Z6K3 402 aaPredicted RBP11.12□□□□□ -0.63
CDC42EP3-206ENST00000611976 CAMK1DQ8IU85 385 aa11.12□□□□□ -0.63
CDC42EP3-206ENST00000611976 SNX31Q8N9S9 440 aa11.12□□□□□ -0.63
CDC42EP3-206ENST00000611976 VPS37AQ8NEZ2 397 aa11.12□□□□□ -0.63
CDC42EP3-206ENST00000611976 NSMCE2Q96MF7 247 aa11.12□□□□□ -0.63
CDC42EP3-206ENST00000611976 GLIS2Q9BZE0 524 aaPredicted RBP11.12□□□□□ -0.63
CDC42EP3-206ENST00000611976 PCDHB8Q9UN66 801 aa11.12□□□□□ -0.63
CDC42EP3-206ENST00000611976 LRCH4O75427 683 aa11.12□□□□□ -0.63
CDC42EP3-206ENST00000611976 GRIA4P48058 902 aa11.12□□□□□ -0.63
CDC42EP3-206ENST00000611976 RENBPP51606 427 aa11.12□□□□□ -0.63
CDC42EP3-206ENST00000611976 CRADDP78560 199 aa11.12□□□□□ -0.63
CDC42EP3-206ENST00000611976 FOLH1Q04609 750 aa11.12□□□□□ -0.63
CDC42EP3-206ENST00000611976 TTLL9Q3SXZ7 439 aa11.12□□□□□ -0.63
CDC42EP3-206ENST00000611976 CYP2R1Q6VVX0 501 aa11.12□□□□□ -0.63
CDC42EP3-206ENST00000611976 C10orf107Q8IVU9 208 aa11.12□□□□□ -0.63
CDC42EP3-206ENST00000611976 GSTCDQ8NEC7 633 aa11.12□□□□□ -0.63
CDC42EP3-206ENST00000611976 ZSCAN18Q8TBC5 510 aaPredicted RBP11.12□□□□□ -0.63
CDC42EP3-206ENST00000611976 BSNDQ8WZ55 320 aa11.12□□□□□ -0.63
CDC42EP3-206ENST00000611976 APOL5Q9BWW9 433 aa11.12□□□□□ -0.63
CDC42EP3-206ENST00000611976 PCDH18Q9HCL0 1135 aa11.12□□□□□ -0.63
CDC42EP3-206ENST00000611976 NT5MQ9NPB1 228 aa11.12□□□□□ -0.63
CDC42EP3-206ENST00000611976 DNAJC28Q9NX36 388 aa11.12□□□□□ -0.63
CDC42EP3-206ENST00000611976 TUBGCP4Q9UGJ1 667 aa11.12□□□□□ -0.63
CDC42EP3-206ENST00000611976 ATP11BQ9Y2G3 1177 aa11.12□□□□□ -0.63
CDC42EP3-206ENST00000611976 TSC22D4Q9Y3Q8 395 aa11.12□□□□□ -0.63
CDC42EP3-206ENST00000611976 DYTNA2CJ06 578 aa11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 PHGDHO43175 533 aaKnown RBP11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 BCL10O95999 233 aa11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 THP07101 528 aa11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 SP100P23497 879 aaPredicted RBP11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 AKT1P31749 480 aa11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 HARS2P49590 506 aaKnown RBP11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 NAGLUP54802 743 aa11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 LIPMQ5VYY2 423 aa11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 CCDC81Q6ZN84 652 aa11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 XYLT1Q86Y38 959 aa11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 TSPAN14Q8NG11 270 aa11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 GORASP1Q9BQQ3 440 aa11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 EBF2Q9HAK2 575 aa11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 SNX15Q9NRS6 342 aa11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 USP12O75317 370 aa11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 LYPLA1O75608 230 aaPredicted RBP11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 YBX3P16989 372 aaKnown RBP eCLIP11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 ATP5F1P24539 256 aaPredicted RBP11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 MAPK1P28482 360 aa11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 LRPAP1P30533 357 aa11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 NNMTP40261 264 aa11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 GSCP56915 257 aaPredicted RBP11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 C16orf72Q14CZ0 275 aa11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 MARC1Q5VT66 337 aa11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 ABHD15Q6UXT9 468 aa11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 TSHZ1Q6ZSZ6 1077 aa11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 PIWIL4Q7Z3Z4 852 aaKnown RBP11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 DHRSXQ8N5I4 330 aa11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 MAB21L3Q8N8X9 362 aa11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 BANPQ8N9N5 519 aa11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 C10orf82Q8WW14 230 aa11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 SMARCD1Q96GM5 515 aa11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 CADM1Q9BY67 442 aaKnown RBP11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 ACE2Q9BYF1 805 aaPredicted RBP11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 UNKQ9C0B0 810 aaKnown RBP11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 SETD4Q9NVD3 440 aa11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 BCLAF3A2AJT9 711 aaKnown RBP11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 ZNF286BP0CG31 522 aa11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 ATP6V1B2P21281 511 aa11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 FOXN2P32314 431 aa11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 PSME3P61289 254 aa11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 KRR1Q13601 381 aaKnown RBP11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 ARHGEF6Q15052 776 aa11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 CATSPERGQ6ZRH7 1159 aa11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 PLPPR4Q7Z2D5 763 aa11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 SLC4A11Q8NBS3 891 aa11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 LRRC15Q8TF66 581 aa11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 LENG9Q96B70 501 aa11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 OSMRQ99650 979 aa11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 SEMA6AQ9H2E6 1030 aa11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 MID1IP1Q9NPA3 183 aa11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 SPAG4Q9NPE6 437 aa11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 RGS18Q9NS28 235 aa11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 TEKT2Q9UIF3 430 aa11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 LAMB4A4D0S4 1761 aa11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 INPP4BO15327 924 aa11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 CSTF3Q12996 717 aaKnown RBP11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 SHROOM1Q2M3G4 852 aaPredicted RBP11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 USP6NLQ92738 828 aa11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 SEPT5Q99719 369 aaPredicted RBP11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 ABI2Q9NYB9 513 aaPredicted RBP11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 PSMD13Q9UNM6 376 aa11.11□□□□□ -0.63
CDC42EP3-206ENST00000611976 DPPA5A6NC42 116 aa11.1□□□□□ -0.63
CDC42EP3-206ENST00000611976 B4GALT4O60513 344 aa11.1□□□□□ -0.63
CDC42EP3-206ENST00000611976 ZMPSTE24O75844 475 aa11.1□□□□□ -0.63
CDC42EP3-206ENST00000611976 B3GAT3O94766 335 aa11.1□□□□□ -0.63
CDC42EP3-206ENST00000611976 PTPRAP18433 802 aa11.1□□□□□ -0.63
CDC42EP3-206ENST00000611976 PIK3R1P27986 724 aa11.1□□□□□ -0.63
CDC42EP3-206ENST00000611976 CYP2C18P33260 490 aa11.1□□□□□ -0.63
CDC42EP3-206ENST00000611976 TCEAL1Q15170 157 aa11.1□□□□□ -0.63
CDC42EP3-206ENST00000611976 CYP51A1Q16850 503 aa11.1□□□□□ -0.63
CDC42EP3-206ENST00000611976 CELF3Q5SZQ8 465 aaKnown RBP11.1□□□□□ -0.63
CDC42EP3-206ENST00000611976 SZRD1Q7Z422 152 aa11.1□□□□□ -0.63
CDC42EP3-206ENST00000611976 CYP4X1Q8N118 509 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms