RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 ERI2A8K979 691 aaKnown RBP13.93□□□□□ -0.18
NEK3-205ENST00000610828 C2CD2LO14523 706 aa13.93□□□□□ -0.18
NEK3-205ENST00000610828 ATP9BO43861 1147 aa13.93□□□□□ -0.18
NEK3-205ENST00000610828 TADA2AO75478 443 aa13.93□□□□□ -0.18
NEK3-205ENST00000610828 OAZ2O95190 189 aa13.93□□□□□ -0.18
NEK3-205ENST00000610828 GRK4P32298 578 aa13.93□□□□□ -0.18
NEK3-205ENST00000610828 CRHR1P34998 444 aa13.93□□□□□ -0.18
NEK3-205ENST00000610828 KCNJ2P63252 427 aa13.93□□□□□ -0.18
NEK3-205ENST00000610828 ELF3P78545 371 aaPredicted RBP13.93□□□□□ -0.18
NEK3-205ENST00000610828 DDR2Q16832 855 aa13.93□□□□□ -0.18
NEK3-205ENST00000610828 SPANXN3Q5MJ09 141 aa13.93□□□□□ -0.18
NEK3-205ENST00000610828 KCTD11Q693B1 232 aa13.93□□□□□ -0.18
NEK3-205ENST00000610828 TIFABQ6ZNK6 161 aa13.93□□□□□ -0.18
NEK3-205ENST00000610828 ARHGAP36Q6ZRI8 547 aa13.93□□□□□ -0.18
NEK3-205ENST00000610828 CEP57Q86XR8 500 aa13.93□□□□□ -0.18
NEK3-205ENST00000610828 DCP1BQ8IZD4 617 aaKnown RBP13.93□□□□□ -0.18
NEK3-205ENST00000610828 KIF2BQ8N4N8 673 aa13.93□□□□□ -0.18
NEK3-205ENST00000610828 ATPAF2Q8N5M1 289 aa13.93□□□□□ -0.18
NEK3-205ENST00000610828 ZNF669Q96BR6 464 aaPredicted RBP13.93□□□□□ -0.18
NEK3-205ENST00000610828 CAPNS2Q96L46 248 aa13.93□□□□□ -0.18
NEK3-205ENST00000610828 FCRL2Q96LA5 508 aaPredicted RBP13.93□□□□□ -0.18
NEK3-205ENST00000610828 FCRL3Q96P31 734 aaPredicted RBP13.93□□□□□ -0.18
NEK3-205ENST00000610828 ZCWPW1Q9H0M4 648 aa13.93□□□□□ -0.18
NEK3-205ENST00000610828 GPBP1L1Q9HC44 474 aaPredicted RBP13.93□□□□□ -0.18
NEK3-205ENST00000610828 KANSL3Q9P2N6 904 aa13.93□□□□□ -0.18
NEK3-205ENST00000610828 TRIM33Q9UPN9 1127 aa13.93□□□□□ -0.18
NEK3-205ENST00000610828 MYO16Q9Y6X6 1858 aa13.93□□□□□ -0.18
NEK3-205ENST00000610828 UNC5CO95185 931 aa13.93□□□□□ -0.18
NEK3-205ENST00000610828 ALDOAP04075 364 aaKnown RBP13.93□□□□□ -0.18
NEK3-205ENST00000610828 GPR15P49685 360 aa13.93□□□□□ -0.18
NEK3-205ENST00000610828 FAM189BP81408 668 aa13.93□□□□□ -0.18
NEK3-205ENST00000610828 COG7P83436 770 aa13.93□□□□□ -0.18
NEK3-205ENST00000610828 PARP9Q8IXQ6 854 aa13.93□□□□□ -0.18
NEK3-205ENST00000610828 CASS4Q9NQ75 786 aa13.93□□□□□ -0.18
NEK3-205ENST00000610828 CCDC195A0A1B0GUA6 201 aa13.92□□□□□ -0.18
NEK3-205ENST00000610828 TMEM189-UBE2V1I3L0A0 370 aa13.92□□□□□ -0.18
NEK3-205ENST00000610828 TPP1O14773 563 aa13.92□□□□□ -0.18
NEK3-205ENST00000610828 ITGA2BP08514 1039 aa13.92□□□□□ -0.18
NEK3-205ENST00000610828 NQO1P15559 274 aaKnown RBP13.92□□□□□ -0.18
NEK3-205ENST00000610828 IRX4P78413 519 aa13.92□□□□□ -0.18
NEK3-205ENST00000610828 TMPRSS15P98073 1019 aa13.92□□□□□ -0.18
NEK3-205ENST00000610828 PDE1BQ01064 536 aa13.92□□□□□ -0.18
NEK3-205ENST00000610828 NAB1Q13506 487 aa13.92□□□□□ -0.18
NEK3-205ENST00000610828 PRPSAP1Q14558 356 aa13.92□□□□□ -0.18
NEK3-205ENST00000610828 NFE2Q16621 373 aaPredicted RBP13.92□□□□□ -0.18
NEK3-205ENST00000610828 VARS2Q5ST30 1063 aaKnown RBP13.92□□□□□ -0.18
NEK3-205ENST00000610828 CERCAMQ5T4B2 595 aa13.92□□□□□ -0.18
NEK3-205ENST00000610828 OTOP3Q7RTS5 596 aa13.92□□□□□ -0.18
NEK3-205ENST00000610828 ZNF398Q8TD17 642 aa13.92□□□□□ -0.18
NEK3-205ENST00000610828 DPF3Q92784 378 aa13.92□□□□□ -0.18
NEK3-205ENST00000610828 TBC1D31Q96DN5 1066 aa13.92□□□□□ -0.18
NEK3-205ENST00000610828 CATSPERBQ9H7T0 1116 aa13.92□□□□□ -0.18
NEK3-205ENST00000610828 OSER1Q9NX31 292 aa13.92□□□□□ -0.18
NEK3-205ENST00000610828 KLF11O14901 512 aa13.91□□□□□ -0.18
NEK3-205ENST00000610828 FGF10O15520 208 aaPredicted RBP13.91□□□□□ -0.18
NEK3-205ENST00000610828 INHAP05111 366 aa13.91□□□□□ -0.18
NEK3-205ENST00000610828 CCNB1P14635 433 aa13.91□□□□□ -0.18
NEK3-205ENST00000610828 TPH1P17752 444 aa13.91□□□□□ -0.18
NEK3-205ENST00000610828 TARSP26639 723 aaKnown RBP13.91□□□□□ -0.18
NEK3-205ENST00000610828 SKIV2L2P42285 1042 aaKnown RBP13.91□□□□□ -0.18
NEK3-205ENST00000610828 CHI3L2Q15782 390 aa13.91□□□□□ -0.18
NEK3-205ENST00000610828 LHX8Q68G74 356 aa13.91□□□□□ -0.18
NEK3-205ENST00000610828 MTDHQ86UE4 582 aaKnown RBP13.91□□□□□ -0.18
NEK3-205ENST00000610828 NUDCD3Q8IVD9 361 aa13.91□□□□□ -0.18
NEK3-205ENST00000610828 ABI1Q8IZP0 508 aa13.91□□□□□ -0.18
NEK3-205ENST00000610828 NUP93Q8N1F7 819 aa13.91□□□□□ -0.18
NEK3-205ENST00000610828 CNTD1Q8N815 330 aa13.91□□□□□ -0.18
NEK3-205ENST00000610828 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.91□□□□□ -0.18
NEK3-205ENST00000610828 ZSCAN18Q8TBC5 510 aaPredicted RBP13.91□□□□□ -0.18
NEK3-205ENST00000610828 E2F7Q96AV8 911 aa13.91□□□□□ -0.18
NEK3-205ENST00000610828 TSEN34Q9BSV6 310 aaKnown RBP13.91□□□□□ -0.18
NEK3-205ENST00000610828 FTHL17Q9BXU8 183 aa13.91□□□□□ -0.18
NEK3-205ENST00000610828 TXLNGQ9NUQ3 528 aa13.91□□□□□ -0.18
NEK3-205ENST00000610828 NDFIP2Q9NV92 336 aa13.91□□□□□ -0.18
NEK3-205ENST00000610828 CCNCP24863 283 aa13.91□□□□□ -0.18
NEK3-205ENST00000610828 TUBP50607 506 aa13.91□□□□□ -0.18
NEK3-205ENST00000610828 BST1Q10588 318 aa13.91□□□□□ -0.18
NEK3-205ENST00000610828 PPP2R5DQ14738 602 aa13.91□□□□□ -0.18
NEK3-205ENST00000610828 TAF1BQ53T94 588 aaPredicted RBP13.91□□□□□ -0.18
NEK3-205ENST00000610828 LRRC8DQ7L1W4 858 aa13.91□□□□□ -0.18
NEK3-205ENST00000610828 TMEM135Q86UB9 458 aa13.91□□□□□ -0.18
NEK3-205ENST00000610828 MON1AQ86VX9 555 aa13.91□□□□□ -0.18
NEK3-205ENST00000610828 ARHGAP12Q8IWW6 846 aa13.91□□□□□ -0.18
NEK3-205ENST00000610828 TRIM42Q8IWZ5 723 aa13.91□□□□□ -0.18
NEK3-205ENST00000610828 ATP2A3Q93084 1043 aa13.91□□□□□ -0.18
NEK3-205ENST00000610828 MFSD3Q96ES6 412 aa13.91□□□□□ -0.18
NEK3-205ENST00000610828 ATXN7L3BQ96GX2 97 aa13.91□□□□□ -0.18
NEK3-205ENST00000610828 FUBP3Q96I24 572 aaKnown RBP eCLIP13.91□□□□□ -0.18
NEK3-205ENST00000610828 B3GALT6Q96L58 329 aa13.91□□□□□ -0.18
NEK3-205ENST00000610828 SERPINB11Q96P15 392 aa13.91□□□□□ -0.18
NEK3-205ENST00000610828 MPP6Q9NZW5 540 aa13.91□□□□□ -0.18
NEK3-205ENST00000610828 ZFP69BQ9UJL9 534 aa13.91□□□□□ -0.18
NEK3-205ENST00000610828 E9PAM4 449 aa13.9□□□□□ -0.18
NEK3-205ENST00000610828 USP1O94782 785 aa13.9□□□□□ -0.18
NEK3-205ENST00000610828 TGDSO95455 350 aa13.9□□□□□ -0.18
NEK3-205ENST00000610828 HOXC13P31276 330 aa13.9□□□□□ -0.18
NEK3-205ENST00000610828 GP5P40197 560 aa13.9□□□□□ -0.18
NEK3-205ENST00000610828 ARFIP2P53365 341 aa13.9□□□□□ -0.18
NEK3-205ENST00000610828 ARPP19P56211 112 aa13.9□□□□□ -0.18
NEK3-205ENST00000610828 ZNF33AQ06730 810 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms