RNA–Protein interactions for RNA: ENST00000608858.5

CTCFL-220, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-220ENST00000608858 IQCHQ86VS3 1027 aa9.62□□□□□ -0.87
CTCFL-220ENST00000608858 CYFIP2Q96F07 1278 aa9.62□□□□□ -0.87
CTCFL-220ENST00000608858 PPP1R13BQ96KQ4 1090 aa9.62□□□□□ -0.87
CTCFL-220ENST00000608858 MRGPRX3Q96LB0 322 aa9.62□□□□□ -0.87
CTCFL-220ENST00000608858 FUCA2Q9BTY2 467 aa9.62□□□□□ -0.87
CTCFL-220ENST00000608858 PANK2Q9BZ23 570 aa9.62□□□□□ -0.87
CTCFL-220ENST00000608858 XYLT2Q9H1B5 865 aa9.62□□□□□ -0.87
CTCFL-220ENST00000608858 TMPRSS4Q9NRS4 437 aa9.62□□□□□ -0.87
CTCFL-220ENST00000608858 TJP2Q9UDY2 1190 aa9.62□□□□□ -0.87
CTCFL-220ENST00000608858 PISDQ9UG56 409 aa9.62□□□□□ -0.87
CTCFL-220ENST00000608858 FZD4Q9ULV1 537 aa9.62□□□□□ -0.87
CTCFL-220ENST00000608858 CEP83Q9Y592 693 aa9.62□□□□□ -0.87
CTCFL-220ENST00000608858 CRYBG3Q68DQ2 2970 aa9.62□□□□□ -0.87
CTCFL-220ENST00000608858 VPS37CA5D8V6 355 aaPredicted RBP9.61□□□□□ -0.87
CTCFL-220ENST00000608858 C10orf142B7Z368 130 aa9.61□□□□□ -0.87
CTCFL-220ENST00000608858 PLD2O14939 933 aa9.61□□□□□ -0.87
CTCFL-220ENST00000608858 CLIC2O15247 247 aa9.61□□□□□ -0.87
CTCFL-220ENST00000608858 KRT7P08729 469 aa9.61□□□□□ -0.87
CTCFL-220ENST00000608858 RNF224P0DH78 156 aa9.61□□□□□ -0.87
CTCFL-220ENST00000608858 ITIH1P19827 911 aa9.61□□□□□ -0.87
CTCFL-220ENST00000608858 C5AR1P21730 350 aa9.61□□□□□ -0.87
CTCFL-220ENST00000608858 DRD3P35462 400 aa9.61□□□□□ -0.87
CTCFL-220ENST00000608858 UQCRFS1P47985 274 aa9.61□□□□□ -0.87
CTCFL-220ENST00000608858 HARS2P49590 506 aaKnown RBP9.61□□□□□ -0.87
CTCFL-220ENST00000608858 CYP2J2P51589 502 aa9.61□□□□□ -0.87
CTCFL-220ENST00000608858 POLE2P56282 527 aa9.61□□□□□ -0.87
CTCFL-220ENST00000608858 MORC3Q14149 939 aa9.61□□□□□ -0.87
CTCFL-220ENST00000608858 OR6B2Q6IFH4 312 aa9.61□□□□□ -0.87
CTCFL-220ENST00000608858 CARNMT1Q8N4J0 409 aa9.61□□□□□ -0.87
CTCFL-220ENST00000608858 PTPRN2Q92932 1015 aa9.61□□□□□ -0.87
CTCFL-220ENST00000608858 CGRRF1Q99675 332 aa9.61□□□□□ -0.87
CTCFL-220ENST00000608858 ZNF768Q9H5H4 540 aaKnown RBP9.61□□□□□ -0.87
CTCFL-220ENST00000608858 INTS6Q9UL03 887 aaKnown RBP9.61□□□□□ -0.87
CTCFL-220ENST00000608858 SARDHQ9UL12 918 aa9.61□□□□□ -0.87
CTCFL-220ENST00000608858 STRIP2Q9ULQ0 834 aa9.61□□□□□ -0.87
CTCFL-220ENST00000608858 ERVW-1Q9UQF0 538 aa9.61□□□□□ -0.87
CTCFL-220ENST00000608858 DAAM1Q9Y4D1 1078 aa9.61□□□□□ -0.87
CTCFL-220ENST00000608858 LRRK1Q38SD2 2015 aa9.6□□□□□ -0.87
CTCFL-220ENST00000608858 PRAMEF33A0A0G2JMD5 474 aa9.6□□□□□ -0.87
CTCFL-220ENST00000608858 PRAMEF10O60809 474 aa9.6□□□□□ -0.87
CTCFL-220ENST00000608858 RNGTTO60942 597 aaKnown RBP9.6□□□□□ -0.87
CTCFL-220ENST00000608858 STK19P49842 368 aaPredicted RBP9.6□□□□□ -0.87
CTCFL-220ENST00000608858 PDX1P52945 283 aa9.6□□□□□ -0.87
CTCFL-220ENST00000608858 CNTN1Q12860 1018 aa9.6□□□□□ -0.87
CTCFL-220ENST00000608858 OVGP1Q12889 678 aa9.6□□□□□ -0.87
CTCFL-220ENST00000608858 BIRC3Q13489 604 aa9.6□□□□□ -0.87
CTCFL-220ENST00000608858 C1orf61Q13536 156 aa9.6□□□□□ -0.87
CTCFL-220ENST00000608858 SPIDRQ14159 915 aa9.6□□□□□ -0.87
CTCFL-220ENST00000608858 BMT2Q1RMZ1 405 aa9.6□□□□□ -0.87
CTCFL-220ENST00000608858 ZNF699Q32M78 642 aa9.6□□□□□ -0.87
CTCFL-220ENST00000608858 FSCBQ5H9T9 825 aa9.6□□□□□ -0.87
CTCFL-220ENST00000608858 ZNF667Q5HYK9 610 aa9.6□□□□□ -0.87
CTCFL-220ENST00000608858 PPP1R15BQ5SWA1 713 aa9.6□□□□□ -0.87
CTCFL-220ENST00000608858 ADGRF1Q5T601 910 aa9.6□□□□□ -0.87
CTCFL-220ENST00000608858 BORAQ6PGQ7 559 aa9.6□□□□□ -0.87
CTCFL-220ENST00000608858 Q6ZSR6 202 aa9.6□□□□□ -0.87
CTCFL-220ENST00000608858 FAM217AQ8IXS0 508 aa9.6□□□□□ -0.87
CTCFL-220ENST00000608858 SLC22A18ASQ8N1D0 253 aa9.6□□□□□ -0.87
CTCFL-220ENST00000608858 CRYBG2Q8N1P7 616 aa9.6□□□□□ -0.87
CTCFL-220ENST00000608858 CFAP52Q8N1V2 620 aa9.6□□□□□ -0.87
CTCFL-220ENST00000608858 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.6□□□□□ -0.87
CTCFL-220ENST00000608858 LMX1AQ8TE12 382 aa9.6□□□□□ -0.87
CTCFL-220ENST00000608858 EDEM1Q92611 657 aa9.6□□□□□ -0.87
CTCFL-220ENST00000608858 SYAP1Q96A49 352 aaPredicted RBP9.6□□□□□ -0.87
CTCFL-220ENST00000608858 TTC17Q96AE7 1141 aa9.6□□□□□ -0.87
CTCFL-220ENST00000608858 GRAMD1AQ96CP6 724 aa9.6□□□□□ -0.87
CTCFL-220ENST00000608858 DNAJC19Q96DA6 116 aa9.6□□□□□ -0.87
CTCFL-220ENST00000608858 MYEOVQ96EZ4 313 aa9.6□□□□□ -0.87
CTCFL-220ENST00000608858 EPSTI1Q96J88 318 aa9.6□□□□□ -0.87
CTCFL-220ENST00000608858 TWNKQ96RR1 684 aa9.6□□□□□ -0.87
CTCFL-220ENST00000608858 CCDC3Q9BQI4 270 aa9.6□□□□□ -0.87
CTCFL-220ENST00000608858 PREBQ9HCU5 417 aa9.6□□□□□ -0.87
CTCFL-220ENST00000608858 CLIC5Q9NZA1 410 aa9.6□□□□□ -0.87
CTCFL-220ENST00000608858 SEPT10Q9P0V9 454 aa9.6□□□□□ -0.87
CTCFL-220ENST00000608858 KLF15Q9UIH9 416 aa9.6□□□□□ -0.87
CTCFL-220ENST00000608858 PCDHB11Q9Y5F2 797 aa9.6□□□□□ -0.87
CTCFL-220ENST00000608858 PCDHA5Q9Y5H7 936 aa9.6□□□□□ -0.87
CTCFL-220ENST00000608858 COL27A1Q8IZC6 1860 aaPredicted RBP9.59□□□□□ -0.87
CTCFL-220ENST00000608858 SPENQ96T58 3664 aaKnown RBP9.59□□□□□ -0.87
CTCFL-220ENST00000608858 SETD2Q9BYW2 2564 aaPredicted RBP9.59□□□□□ -0.87
CTCFL-220ENST00000608858 EDDM13A0A1B0GTR0 161 aa9.59□□□□□ -0.87
CTCFL-220ENST00000608858 A0A1W2PQU0 124 aa9.59□□□□□ -0.87
CTCFL-220ENST00000608858 TARSL2A2RTX5 802 aaKnown RBP9.59□□□□□ -0.87
CTCFL-220ENST00000608858 EME2A4GXA9 379 aaPredicted RBP9.59□□□□□ -0.87
CTCFL-220ENST00000608858 BNIP3LO60238 219 aa9.59□□□□□ -0.87
CTCFL-220ENST00000608858 SEMA7AO75326 666 aa9.59□□□□□ -0.87
CTCFL-220ENST00000608858 ADH1BP00325 375 aa9.59□□□□□ -0.87
CTCFL-220ENST00000608858 JMJD7P0C870 316 aa9.59□□□□□ -0.87
CTCFL-220ENST00000608858 LIPCP11150 499 aa9.59□□□□□ -0.87
CTCFL-220ENST00000608858 GNLYP22749 145 aa9.59□□□□□ -0.87
CTCFL-220ENST00000608858 ELAVL4P26378 380 aaKnown RBP9.59□□□□□ -0.87
CTCFL-220ENST00000608858 MZF1P28698 734 aaPredicted RBP9.59□□□□□ -0.87
CTCFL-220ENST00000608858 TNFRSF8P28908 595 aa9.59□□□□□ -0.87
CTCFL-220ENST00000608858 ATICP31939 592 aa9.59□□□□□ -0.87
CTCFL-220ENST00000608858 HOXD13P35453 343 aa9.59□□□□□ -0.87
CTCFL-220ENST00000608858 MAPK10P53779 464 aa9.59□□□□□ -0.87
CTCFL-220ENST00000608858 YWHAGP61981 247 aaKnown RBP eCLIP9.59□□□□□ -0.87
CTCFL-220ENST00000608858 CYP24A1Q07973 514 aa9.59□□□□□ -0.87
CTCFL-220ENST00000608858 NR0B2Q15466 257 aa9.59□□□□□ -0.87
CTCFL-220ENST00000608858 TCEA2Q15560 299 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms