RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 RGL4Q8IZJ4 473 aa12.66□□□□□ -0.38
CTSA-210ENST00000606000 RXFP2Q8WXD0 754 aa12.66□□□□□ -0.38
CTSA-210ENST00000606000 ZNF419Q96HQ0 510 aaPredicted RBP12.66□□□□□ -0.38
CTSA-210ENST00000606000 AGPAT1Q99943 283 aa12.66□□□□□ -0.38
CTSA-210ENST00000606000 CBX8Q9HC52 389 aa12.66□□□□□ -0.38
CTSA-210ENST00000606000 TAS2R14Q9NYV8 317 aa12.66□□□□□ -0.38
CTSA-210ENST00000606000 SERGEFQ9UGK8 458 aa12.66□□□□□ -0.38
CTSA-210ENST00000606000 EVLQ9UI08 416 aaPredicted RBP12.66□□□□□ -0.38
CTSA-210ENST00000606000 PLXNA2O75051 1894 aa12.65□□□□□ -0.38
CTSA-210ENST00000606000 ITIH6Q6UXX5 1313 aa12.65□□□□□ -0.38
CTSA-210ENST00000606000 C2CD4BA6NLJ0 364 aa12.65□□□□□ -0.38
CTSA-210ENST00000606000 MEI4A8MW99 385 aa12.65□□□□□ -0.38
CTSA-210ENST00000606000 E9PAM4 449 aa12.65□□□□□ -0.38
CTSA-210ENST00000606000 MOCS3O95396 460 aa12.65□□□□□ -0.38
CTSA-210ENST00000606000 SRPRAP08240 638 aaKnown RBP12.65□□□□□ -0.38
CTSA-210ENST00000606000 E2F5Q15329 346 aa12.65□□□□□ -0.38
CTSA-210ENST00000606000 C5orf22Q49AR2 442 aa12.65□□□□□ -0.38
CTSA-210ENST00000606000 DCAF12L1Q5VU92 463 aa12.65□□□□□ -0.38
CTSA-210ENST00000606000 RNF219Q5W0B1 726 aaPredicted RBP12.65□□□□□ -0.38
CTSA-210ENST00000606000 ZNF776Q68DI1 518 aaPredicted RBP12.65□□□□□ -0.38
CTSA-210ENST00000606000 IL31Q6EBC2 164 aa12.65□□□□□ -0.38
CTSA-210ENST00000606000 SLC23A3Q6PIS1 610 aa12.65□□□□□ -0.38
CTSA-210ENST00000606000 PHF13Q86YI8 300 aaPredicted RBP12.65□□□□□ -0.38
CTSA-210ENST00000606000 PSMB7Q99436 277 aa12.65□□□□□ -0.38
CTSA-210ENST00000606000 SYT11Q9BT88 431 aa12.65□□□□□ -0.38
CTSA-210ENST00000606000 RSPH9Q9H1X1 276 aaPredicted RBP12.65□□□□□ -0.38
CTSA-210ENST00000606000 C6orf106Q9H6K1 298 aaPredicted RBP12.65□□□□□ -0.38
CTSA-210ENST00000606000 ADAM22Q9P0K1 906 aa12.65□□□□□ -0.38
CTSA-210ENST00000606000 OR51B4Q9Y5P0 310 aa12.65□□□□□ -0.38
CTSA-210ENST00000606000 DOCK4Q8N1I0 1966 aa12.64□□□□□ -0.39
CTSA-210ENST00000606000 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.64□□□□□ -0.39
CTSA-210ENST00000606000 A0A1B0GTH6 734 aa12.64□□□□□ -0.39
CTSA-210ENST00000606000 TCRBV5S1A1TA0A578 114 aa12.64□□□□□ -0.39
CTSA-210ENST00000606000 PLK4O00444 970 aa12.64□□□□□ -0.39
CTSA-210ENST00000606000 MID1O15344 667 aa12.64□□□□□ -0.39
CTSA-210ENST00000606000 SNAP91O60641 907 aa12.64□□□□□ -0.39
CTSA-210ENST00000606000 SRGAP2O75044 1071 aa12.64□□□□□ -0.39
CTSA-210ENST00000606000 F9P00740 461 aa12.64□□□□□ -0.39
CTSA-210ENST00000606000 DNTTP04053 509 aa12.64□□□□□ -0.39
CTSA-210ENST00000606000 RHOCP08134 193 aa12.64□□□□□ -0.39
CTSA-210ENST00000606000 FERP16591 822 aa12.64□□□□□ -0.39
CTSA-210ENST00000606000 GLDCP23378 1020 aa12.64□□□□□ -0.39
CTSA-210ENST00000606000 RFC1P35251 1148 aaPredicted RBP12.64□□□□□ -0.39
CTSA-210ENST00000606000 PSMD8P48556 350 aa12.64□□□□□ -0.39
CTSA-210ENST00000606000 PLK1P53350 603 aa12.64□□□□□ -0.39
CTSA-210ENST00000606000 METAP1P53582 386 aa12.64□□□□□ -0.39
CTSA-210ENST00000606000 CDH4P55283 916 aa12.64□□□□□ -0.39
CTSA-210ENST00000606000 ZNF177Q13360 481 aaPredicted RBP12.64□□□□□ -0.39
CTSA-210ENST00000606000 DUOXA1Q1HG43 343 aa12.64□□□□□ -0.39
CTSA-210ENST00000606000 UAP1L1Q3KQV9 507 aa12.64□□□□□ -0.39
CTSA-210ENST00000606000 ARCQ7LC44 396 aa12.64□□□□□ -0.39
CTSA-210ENST00000606000 IRF2BP2Q7Z5L9 587 aa12.64□□□□□ -0.39
CTSA-210ENST00000606000 MMAAQ8IVH4 418 aaKnown RBP12.64□□□□□ -0.39
CTSA-210ENST00000606000 STK40Q8N2I9 435 aa12.64□□□□□ -0.39
CTSA-210ENST00000606000 ZCCHC9Q8N567 271 aaKnown RBP12.64□□□□□ -0.39
CTSA-210ENST00000606000 CCDC185Q8N715 623 aa12.64□□□□□ -0.39
CTSA-210ENST00000606000 PTPRN2Q92932 1015 aa12.64□□□□□ -0.39
CTSA-210ENST00000606000 FEM1AQ9BSK4 669 aa12.64□□□□□ -0.39
CTSA-210ENST00000606000 NUP58Q9BVL2 599 aa12.64□□□□□ -0.39
CTSA-210ENST00000606000 SELENOOQ9BVL4 669 aa12.64□□□□□ -0.39
CTSA-210ENST00000606000 GTPBP2Q9BX10 602 aaKnown RBP12.64□□□□□ -0.39
CTSA-210ENST00000606000 NUSAP1Q9BXS6 441 aaKnown RBP12.64□□□□□ -0.39
CTSA-210ENST00000606000 MIR1-1HGQ9H1L0 117 aa12.64□□□□□ -0.39
CTSA-210ENST00000606000 CAPN10Q9HC96 672 aa12.64□□□□□ -0.39
CTSA-210ENST00000606000 TMEM9BQ9NQ34 198 aa12.64□□□□□ -0.39
CTSA-210ENST00000606000 SUN2Q9UH99 717 aa12.64□□□□□ -0.39
CTSA-210ENST00000606000 VPS28Q9UK41 221 aa12.64□□□□□ -0.39
CTSA-210ENST00000606000 TBC1D30Q9Y2I9 924 aa12.64□□□□□ -0.39
CTSA-210ENST00000606000 IGLV3-10A0A075B6K4 115 aa12.63□□□□□ -0.39
CTSA-210ENST00000606000 A0A0D9SEW6 157 aa12.63□□□□□ -0.39
CTSA-210ENST00000606000 EDDM13A0A1B0GTR0 161 aa12.63□□□□□ -0.39
CTSA-210ENST00000606000 A0A1W2PP55 124 aa12.63□□□□□ -0.39
CTSA-210ENST00000606000 DRGXA6NNA5 263 aa12.63□□□□□ -0.39
CTSA-210ENST00000606000 METTL12A8MUP2 240 aa12.63□□□□□ -0.39
CTSA-210ENST00000606000 TMCO5BA8MYB1 307 aa12.63□□□□□ -0.39
CTSA-210ENST00000606000 FAM72CH0Y354 149 aa12.63□□□□□ -0.39
CTSA-210ENST00000606000 K7ERQ8 282 aa12.63□□□□□ -0.39
CTSA-210ENST00000606000 GIPC1O14908 333 aa12.63□□□□□ -0.39
CTSA-210ENST00000606000 CCP110O43303 1012 aa12.63□□□□□ -0.39
CTSA-210ENST00000606000 ATMINO43313 823 aaPredicted RBP12.63□□□□□ -0.39
CTSA-210ENST00000606000 CLDN11O75508 207 aa12.63□□□□□ -0.39
CTSA-210ENST00000606000 ENDOD1O94919 500 aa12.63□□□□□ -0.39
CTSA-210ENST00000606000 SERPINC1P01008 464 aa12.63□□□□□ -0.39
CTSA-210ENST00000606000 SERPINF2P08697 491 aa12.63□□□□□ -0.39
CTSA-210ENST00000606000 C7P10643 843 aa12.63□□□□□ -0.39
CTSA-210ENST00000606000 KRT3P12035 628 aa12.63□□□□□ -0.39
CTSA-210ENST00000606000 GPD1P21695 349 aa12.63□□□□□ -0.39
CTSA-210ENST00000606000 OXTRP30559 389 aa12.63□□□□□ -0.39
CTSA-210ENST00000606000 SDC4P31431 198 aa12.63□□□□□ -0.39
CTSA-210ENST00000606000 HDAC4P56524 1084 aa12.63□□□□□ -0.39
CTSA-210ENST00000606000 GSCP56915 257 aaPredicted RBP12.63□□□□□ -0.39
CTSA-210ENST00000606000 RPL7AP62424 266 aaKnown RBP12.63□□□□□ -0.39
CTSA-210ENST00000606000 SLC12A1Q13621 1099 aa12.63□□□□□ -0.39
CTSA-210ENST00000606000 CST6Q15828 149 aa12.63□□□□□ -0.39
CTSA-210ENST00000606000 FAM72AQ5TYM5 149 aa12.63□□□□□ -0.39
CTSA-210ENST00000606000 FAM72DQ6L9T8 149 aa12.63□□□□□ -0.39
CTSA-210ENST00000606000 WDR59Q6PJI9 974 aa12.63□□□□□ -0.39
CTSA-210ENST00000606000 FAM72BQ86X60 149 aa12.63□□□□□ -0.39
CTSA-210ENST00000606000 AADATQ8N5Z0 425 aa12.63□□□□□ -0.39
CTSA-210ENST00000606000 C3orf20Q8ND61 904 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms