RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 GOLGA6AQ9NYA3 693 aa12.6□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 XPO7Q9UIA9 1087 aaKnown RBP12.6□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 KIF26AQ9ULI4 1882 aaPredicted RBP12.59□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 CXorf51AA0A1B0GTR3 108 aa12.59□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 MATN3O15232 486 aa12.59□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 MAFKO60675 156 aa12.59□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 CLDN11O75508 207 aa12.59□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 SUN1O94901 812 aa12.59□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 MYZAPP0CAP1 466 aa12.59□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 TCF3P15923 654 aa12.59□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 PHBP35232 272 aa12.59□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 ETFBP38117 255 aa12.59□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 FAM193AP78312 1265 aa12.59□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 ZNF844Q08AG5 666 aa12.59□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 HNRNPDQ14103 355 aaKnown RBP12.59□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 STAT4Q14765 748 aa12.59□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 RAB30Q15771 203 aa12.59□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 CCDC38Q502W7 563 aa12.59□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 FAM133BQ5BKY9 247 aaKnown RBP12.59□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 AGBL2Q5U5Z8 902 aa12.59□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 PLPP4Q5VZY2 271 aa12.59□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 RAP1GAP2Q684P5 730 aa12.59□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 NADSYN1Q6IA69 706 aa12.59□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 C14orf80Q86SX3 495 aa12.59□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 PRUNE1Q86TP1 453 aa12.59□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 SETD3Q86TU7 594 aaPredicted RBP12.59□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 CCDC25Q86WR0 208 aa12.59□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 CCNJLQ8IV13 435 aa12.59□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 ZNF567Q8N184 647 aa12.59□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 CPXM2Q8N436 756 aa12.59□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 ATP11CQ8NB49 1132 aa12.59□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 ZSCAN18Q8TBC5 510 aaPredicted RBP12.59□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 CCDC110Q8TBZ0 833 aa12.59□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 PGM2Q96G03 612 aa12.59□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 ZFRQ96KR1 1074 aaKnown RBP12.59□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 TEKT5Q96M29 485 aa12.59□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 ZNF599Q96NL3 588 aa12.59□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 RPRD1AQ96P16 312 aaPredicted RBP12.59□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 CCDC77Q9BR77 488 aa12.59□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 C17orf80Q9BSJ5 609 aa12.59□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 NAT9Q9BTE0 207 aa12.59□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 MAGEH1Q9H213 219 aa12.59□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 C10orf88Q9H8K7 445 aa12.59□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 ETNK1Q9HBU6 452 aa12.59□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 ZNF334Q9HCZ1 680 aaPredicted RBP12.59□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 ALG13Q9NP73 1137 aaKnown RBP12.59□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 NINJ2Q9NZG7 142 aa12.59□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 VANGL2Q9ULK5 521 aa12.59□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 SNX10Q9Y5X0 201 aa12.59□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 C2orf16Q68DN1 1984 aa12.59□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 MKI67P46013 3256 aaKnown RBP12.59□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 A0A087WUV0 522 aaPredicted RBP12.58□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 TRAV19A0A0A6YYK7 116 aa12.58□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 A0A1B0GVM2 712 aa12.58□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 TCAF2A6NFQ2 919 aa12.58□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 HIDE1A8MVS5 230 aa12.58□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 GFRA2O00451 464 aa12.58□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 XYLBO75191 536 aa12.58□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 MBL2P11226 248 aaPredicted RBP12.58□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 DNAJB1P25685 340 aa12.58□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 GABRR2P28476 465 aa12.58□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 OAS2P29728 719 aaKnown RBP12.58□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 CORO1AP31146 461 aaKnown RBP12.58□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 MAGEA10P43363 369 aaPredicted RBP12.58□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 RENBPP51606 427 aa12.58□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 IFFO1Q0D2I5 559 aa12.58□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 CAMK1Q14012 370 aa12.58□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 SLC29A2Q14542 456 aa12.58□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 SLC14A2Q15849 920 aa12.58□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 CEP85LQ5SZL2 805 aa12.58□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 MPP7Q5T2T1 576 aa12.58□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 C6orf118Q5T5N4 469 aa12.58□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 EMC10Q5UCC4 262 aa12.58□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 ANKRD22Q5VYY1 191 aa12.58□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 Q6ZNB5 142 aa12.58□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 CCDC117Q8IWD4 279 aaPredicted RBP12.58□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 SLC22A17Q8WUG5 538 aa12.58□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 DOCK6Q96HP0 2047 aa12.58□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 SERPINB12Q96P63 405 aa12.58□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 CDCA3Q99618 268 aaPredicted RBP12.58□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 SLC39A8Q9C0K1 460 aa12.58□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 TMBIM4Q9HC24 238 aa12.58□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 SAYSD1Q9NPB0 183 aa12.58□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 KLHL8Q9P2G9 620 aaPredicted RBP12.58□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 LSM7Q9UK45 103 aaKnown RBP12.58□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 ANKRD36A6QL64 1941 aa12.58□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.57□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.57□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 TYW5A2RUC4 315 aaKnown RBP12.57□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 C2orf78A6NCI8 922 aa12.57□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 A6NNZ2 444 aa12.57□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 E7EVH7 732 aa12.57□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 H3BQF6 201 aa12.57□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 RAMP2O60895 175 aa12.57□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 CLASP2O75122 1294 aaKnown RBP12.57□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 RNF40O75150 1001 aa12.57□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 ANXA9O76027 345 aa12.57□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 MAP3K6O95382 1288 aa12.57□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 METTL18O95568 372 aa12.57□□□□□ -0.4
NEDD8-MDP1-203ENST00000604306 AP2A1O95782 977 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms