RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 GP1BAP07359 652 aa12.18□□□□□ -0.46
PDLIM1P1-201ENST00000604187 SRPRAP08240 638 aaKnown RBP12.18□□□□□ -0.46
PDLIM1P1-201ENST00000604187 VAV1P15498 845 aa12.18□□□□□ -0.46
PDLIM1P1-201ENST00000604187 NUDT1P36639 197 aa12.18□□□□□ -0.46
PDLIM1P1-201ENST00000604187 NASPP49321 788 aaPredicted RBP12.18□□□□□ -0.46
PDLIM1P1-201ENST00000604187 VAMP7P51809 220 aa12.18□□□□□ -0.46
PDLIM1P1-201ENST00000604187 RPS24P62847 133 aaKnown RBP12.18□□□□□ -0.46
PDLIM1P1-201ENST00000604187 CUL4BQ13620 913 aa12.18□□□□□ -0.46
PDLIM1P1-201ENST00000604187 STK38Q15208 465 aa12.18□□□□□ -0.46
PDLIM1P1-201ENST00000604187 ISXQ2M1V0 245 aa12.18□□□□□ -0.46
PDLIM1P1-201ENST00000604187 FSCBQ5H9T9 825 aa12.18□□□□□ -0.46
PDLIM1P1-201ENST00000604187 NUGGCQ68CJ6 796 aa12.18□□□□□ -0.46
PDLIM1P1-201ENST00000604187 ARHGAP17Q68EM7 881 aa12.18□□□□□ -0.46
PDLIM1P1-201ENST00000604187 NADSYN1Q6IA69 706 aa12.18□□□□□ -0.46
PDLIM1P1-201ENST00000604187 CCDC117Q8IWD4 279 aaPredicted RBP12.18□□□□□ -0.46
PDLIM1P1-201ENST00000604187 SIX6OS1Q8N1H7 587 aa12.18□□□□□ -0.46
PDLIM1P1-201ENST00000604187 EXD3Q8N9H8 876 aa12.18□□□□□ -0.46
PDLIM1P1-201ENST00000604187 CCDC150Q8NCX0 1101 aa12.18□□□□□ -0.46
PDLIM1P1-201ENST00000604187 RNF25Q96BH1 459 aaPredicted RBP12.18□□□□□ -0.46
PDLIM1P1-201ENST00000604187 KLHDC7BQ96G42 594 aa12.18□□□□□ -0.46
PDLIM1P1-201ENST00000604187 MYOCQ99972 504 aa12.18□□□□□ -0.46
PDLIM1P1-201ENST00000604187 IRX2Q9BZI1 471 aaPredicted RBP12.18□□□□□ -0.46
PDLIM1P1-201ENST00000604187 MMRN2Q9H8L6 949 aa12.18□□□□□ -0.46
PDLIM1P1-201ENST00000604187 MAGEF1Q9HAY2 307 aa12.18□□□□□ -0.46
PDLIM1P1-201ENST00000604187 CISHQ9NSE2 258 aa12.18□□□□□ -0.46
PDLIM1P1-201ENST00000604187 LY6G6EA0A0G2JKS1 128 aa12.17□□□□□ -0.46
PDLIM1P1-201ENST00000604187 PMS2P1A4D2B8 440 aa12.17□□□□□ -0.46
PDLIM1P1-201ENST00000604187 PRAMEF26H0Y7S4 382 aa12.17□□□□□ -0.46
PDLIM1P1-201ENST00000604187 TERTO14746 1132 aaKnown RBP12.17□□□□□ -0.46
PDLIM1P1-201ENST00000604187 XPO1O14980 1071 aaKnown RBP12.17□□□□□ -0.46
PDLIM1P1-201ENST00000604187 SLC7A4O43246 635 aa12.17□□□□□ -0.46
PDLIM1P1-201ENST00000604187 PLRG1O43660 514 aaKnown RBP12.17□□□□□ -0.46
PDLIM1P1-201ENST00000604187 IGLV3-27P01718 113 aa12.17□□□□□ -0.46
PDLIM1P1-201ENST00000604187 THEGLP0DJG4 465 aa12.17□□□□□ -0.46
PDLIM1P1-201ENST00000604187 GIMD1P0DJR0 217 aa12.17□□□□□ -0.46
PDLIM1P1-201ENST00000604187 ALPPL2P10696 532 aa12.17□□□□□ -0.46
PDLIM1P1-201ENST00000604187 NUMBP49757 651 aa12.17□□□□□ -0.46
PDLIM1P1-201ENST00000604187 STK19P49842 368 aaPredicted RBP12.17□□□□□ -0.46
PDLIM1P1-201ENST00000604187 RAD23BP54727 409 aa12.17□□□□□ -0.46
PDLIM1P1-201ENST00000604187 SKOR1P84550 965 aa12.17□□□□□ -0.46
PDLIM1P1-201ENST00000604187 NFKB2Q00653 900 aa12.17□□□□□ -0.46
PDLIM1P1-201ENST00000604187 ECT2LQ008S8 904 aa12.17□□□□□ -0.46
PDLIM1P1-201ENST00000604187 PPP3CAQ08209 521 aa12.17□□□□□ -0.46
PDLIM1P1-201ENST00000604187 KCNMA1Q12791 1236 aa12.17□□□□□ -0.46
PDLIM1P1-201ENST00000604187 STK4Q13043 487 aa12.17□□□□□ -0.46
PDLIM1P1-201ENST00000604187 SETMARQ53H47 684 aaPredicted RBP12.17□□□□□ -0.46
PDLIM1P1-201ENST00000604187 SHC4Q6S5L8 630 aa12.17□□□□□ -0.46
PDLIM1P1-201ENST00000604187 IGF2-ASQ6U949 168 aa12.17□□□□□ -0.46
PDLIM1P1-201ENST00000604187 TRIM69Q86WT6 500 aa12.17□□□□□ -0.46
PDLIM1P1-201ENST00000604187 UNC45BQ8IWX7 931 aa12.17□□□□□ -0.46
PDLIM1P1-201ENST00000604187 KIAA0895Q8NCT3 520 aa12.17□□□□□ -0.46
PDLIM1P1-201ENST00000604187 TMEM174Q8WUU8 243 aa12.17□□□□□ -0.46
PDLIM1P1-201ENST00000604187 PTPRN2Q92932 1015 aa12.17□□□□□ -0.46
PDLIM1P1-201ENST00000604187 FAM131CQ96AQ9 280 aa12.17□□□□□ -0.46
PDLIM1P1-201ENST00000604187 CCDC97Q96F63 343 aaPredicted RBP12.17□□□□□ -0.46
PDLIM1P1-201ENST00000604187 ATXN7L3BQ96GX2 97 aa12.17□□□□□ -0.46
PDLIM1P1-201ENST00000604187 RPL10LQ96L21 214 aaKnown RBP12.17□□□□□ -0.46
PDLIM1P1-201ENST00000604187 APOLD1Q96LR9 279 aa12.17□□□□□ -0.46
PDLIM1P1-201ENST00000604187 SLC46A1Q96NT5 459 aa12.17□□□□□ -0.46
PDLIM1P1-201ENST00000604187 KCTD10Q9H3F6 313 aa12.17□□□□□ -0.46
PDLIM1P1-201ENST00000604187 ABCC13Q9NSE7 274 aa12.17□□□□□ -0.46
PDLIM1P1-201ENST00000604187 KLHL11Q9NVR0 708 aa12.17□□□□□ -0.46
PDLIM1P1-201ENST00000604187 WDR70Q9NW82 654 aa12.17□□□□□ -0.46
PDLIM1P1-201ENST00000604187 FRMD4BQ9Y2L6 1034 aa12.17□□□□□ -0.46
PDLIM1P1-201ENST00000604187 U3KQA8 63 aa12.17□□□□□ -0.46
PDLIM1P1-201ENST00000604187 PIAS2O75928 621 aa12.16□□□□□ -0.46
PDLIM1P1-201ENST00000604187 MOCS3O95396 460 aa12.16□□□□□ -0.46
PDLIM1P1-201ENST00000604187 PRLRP16471 622 aa12.16□□□□□ -0.46
PDLIM1P1-201ENST00000604187 SYT1P21579 422 aa12.16□□□□□ -0.46
PDLIM1P1-201ENST00000604187 AFMP43652 599 aa12.16□□□□□ -0.46
PDLIM1P1-201ENST00000604187 TBX4P57082 545 aa12.16□□□□□ -0.46
PDLIM1P1-201ENST00000604187 CLN3Q13286 438 aa12.16□□□□□ -0.46
PDLIM1P1-201ENST00000604187 ZSCAN23Q3MJ62 389 aa12.16□□□□□ -0.46
PDLIM1P1-201ENST00000604187 SGO2Q562F6 1265 aa12.16□□□□□ -0.46
PDLIM1P1-201ENST00000604187 AGBL4Q5VU57 503 aa12.16□□□□□ -0.46
PDLIM1P1-201ENST00000604187 MSANTD2Q6P1R3 559 aa12.16□□□□□ -0.46
PDLIM1P1-201ENST00000604187 FOXR1Q6PIV2 292 aa12.16□□□□□ -0.46
PDLIM1P1-201ENST00000604187 ATG14Q6ZNE5 492 aa12.16□□□□□ -0.46
PDLIM1P1-201ENST00000604187 GRAMD1CQ8IYS0 662 aa12.16□□□□□ -0.46
PDLIM1P1-201ENST00000604187 CFAP52Q8N1V2 620 aa12.16□□□□□ -0.46
PDLIM1P1-201ENST00000604187 TMEM145Q8NBT3 493 aa12.16□□□□□ -0.46
PDLIM1P1-201ENST00000604187 LINC00301Q8NCQ3 95 aa12.16□□□□□ -0.46
PDLIM1P1-201ENST00000604187 IFI44Q8TCB0 444 aa12.16□□□□□ -0.46
PDLIM1P1-201ENST00000604187 SPAG5Q96R06 1193 aa12.16□□□□□ -0.46
PDLIM1P1-201ENST00000604187 CALN1Q9BXU9 219 aa12.16□□□□□ -0.46
PDLIM1P1-201ENST00000604187 NUCKS1Q9H1E3 243 aaKnown RBP12.16□□□□□ -0.46
PDLIM1P1-201ENST00000604187 KDM4CQ9H3R0 1056 aa12.16□□□□□ -0.46
PDLIM1P1-201ENST00000604187 NLGN3Q9NZ94 848 aa12.16□□□□□ -0.46
PDLIM1P1-201ENST00000604187 TJP2Q9UDY2 1190 aa12.16□□□□□ -0.46
PDLIM1P1-201ENST00000604187 TSPAN16Q9UKR8 245 aa12.16□□□□□ -0.46
PDLIM1P1-201ENST00000604187 PLXNA2O75051 1894 aa12.15□□□□□ -0.46
PDLIM1P1-201ENST00000604187 PDXKO00764 312 aa12.15□□□□□ -0.46
PDLIM1P1-201ENST00000604187 SPTLC2O15270 562 aa12.15□□□□□ -0.46
PDLIM1P1-201ENST00000604187 SLC31A1O15431 190 aa12.15□□□□□ -0.46
PDLIM1P1-201ENST00000604187 POLR2DO15514 142 aaKnown RBP12.15□□□□□ -0.46
PDLIM1P1-201ENST00000604187 LZTS3O60299 673 aaPredicted RBP12.15□□□□□ -0.46
PDLIM1P1-201ENST00000604187 LUC7L3O95232 432 aaKnown RBP12.15□□□□□ -0.46
PDLIM1P1-201ENST00000604187 NTRK1P04629 796 aa12.15□□□□□ -0.46
PDLIM1P1-201ENST00000604187 NEFLP07196 543 aa12.15□□□□□ -0.46
PDLIM1P1-201ENST00000604187 CENPBP07199 599 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms