RNA–Protein interactions for RNA: ENST00000604181.1

CCDC12-210, Transcript of coiled-coil domain containing 12, humanhuman

TSL 4

Gene CCDC12, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-210ENST00000604181 ARHGEF19Q8IW93 802 aa17.4■□□□□ 0.38
CCDC12-210ENST00000604181 ZNF557Q8N988 423 aaPredicted RBP17.4■□□□□ 0.38
CCDC12-210ENST00000604181 SERPINB11Q96P15 392 aa17.4■□□□□ 0.38
CCDC12-210ENST00000604181 UBL7Q96S82 380 aaPredicted RBP17.4■□□□□ 0.38
CCDC12-210ENST00000604181 ARMCX3Q9UH62 379 aaPredicted RBP17.4■□□□□ 0.38
CCDC12-210ENST00000604181 CYTH4Q9UIA0 394 aa17.4■□□□□ 0.38
CCDC12-210ENST00000604181 SARDHQ9UL12 918 aa17.4■□□□□ 0.38
CCDC12-210ENST00000604181 CA5BQ9Y2D0 317 aa17.4■□□□□ 0.38
CCDC12-210ENST00000604181 RTN2O75298 545 aa17.39■□□□□ 0.37
CCDC12-210ENST00000604181 FBXO21O94952 628 aa17.39■□□□□ 0.37
CCDC12-210ENST00000604181 IL1BP01584 269 aa17.39■□□□□ 0.37
CCDC12-210ENST00000604181 TACR2P21452 398 aa17.39■□□□□ 0.37
CCDC12-210ENST00000604181 C5AR1P21730 350 aa17.39■□□□□ 0.37
CCDC12-210ENST00000604181 MAT2AP31153 395 aaKnown RBP17.39■□□□□ 0.37
CCDC12-210ENST00000604181 HNF1BP35680 557 aa17.39■□□□□ 0.37
CCDC12-210ENST00000604181 GPD2P43304 727 aa17.39■□□□□ 0.37
CCDC12-210ENST00000604181 RXRGP48443 463 aa17.39■□□□□ 0.37
CCDC12-210ENST00000604181 RPL34P49207 117 aaKnown RBP17.39■□□□□ 0.37
CCDC12-210ENST00000604181 NNTQ13423 1086 aa17.39■□□□□ 0.37
CCDC12-210ENST00000604181 RTP5Q14D33 572 aa17.39■□□□□ 0.37
CCDC12-210ENST00000604181 COBLL1Q53SF7 1204 aa17.39■□□□□ 0.37
CCDC12-210ENST00000604181 ZC3H12AQ5D1E8 599 aaKnown RBP17.39■□□□□ 0.37
CCDC12-210ENST00000604181 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.39■□□□□ 0.37
CCDC12-210ENST00000604181 RRAGAQ7L523 313 aa17.39■□□□□ 0.37
CCDC12-210ENST00000604181 PPM1KQ8N3J5 372 aa17.39■□□□□ 0.37
CCDC12-210ENST00000604181 OR52K2Q8NGK3 314 aa17.39■□□□□ 0.37
CCDC12-210ENST00000604181 FRS2Q8WU20 508 aa17.39■□□□□ 0.37
CCDC12-210ENST00000604181 SLC39A7Q92504 469 aa17.39■□□□□ 0.37
CCDC12-210ENST00000604181 FAM131CQ96AQ9 280 aa17.39■□□□□ 0.37
CCDC12-210ENST00000604181 FAM149B1Q96BN6 582 aa17.39■□□□□ 0.37
CCDC12-210ENST00000604181 NT5C1BQ96P26 610 aa17.39■□□□□ 0.37
CCDC12-210ENST00000604181 DDX50Q9BQ39 737 aaKnown RBP17.39■□□□□ 0.37
CCDC12-210ENST00000604181 AK5Q9Y6K8 562 aa17.39■□□□□ 0.37
CCDC12-210ENST00000604181 TDRD6O60522 2096 aaKnown RBP17.39■□□□□ 0.37
CCDC12-210ENST00000604181 TENM4Q6N022 2769 aa17.39■□□□□ 0.37
CCDC12-210ENST00000604181 TBC1D3DA0A087WVF3 549 aa17.38■□□□□ 0.37
CCDC12-210ENST00000604181 TBC1D3IA0A087WXS9 549 aa17.38■□□□□ 0.37
CCDC12-210ENST00000604181 TBC1D3EA0A087X179 549 aa17.38■□□□□ 0.37
CCDC12-210ENST00000604181 TBC1D3KA0A087X1G2 549 aa17.38■□□□□ 0.37
CCDC12-210ENST00000604181 TYW5A2RUC4 315 aaKnown RBP17.38■□□□□ 0.37
CCDC12-210ENST00000604181 TBC1D3FA6NER0 549 aaPredicted RBP17.38■□□□□ 0.37
CCDC12-210ENST00000604181 TBC1D3LB9A6J9 549 aa17.38■□□□□ 0.37
CCDC12-210ENST00000604181 SDC3O75056 442 aa17.38■□□□□ 0.37
CCDC12-210ENST00000604181 ADH1BP00325 375 aa17.38■□□□□ 0.37
CCDC12-210ENST00000604181 C1SP09871 688 aa17.38■□□□□ 0.37
CCDC12-210ENST00000604181 TBC1D3HP0C7X1 549 aa17.38■□□□□ 0.37
CCDC12-210ENST00000604181 PDGFRAP16234 1089 aa17.38■□□□□ 0.37
CCDC12-210ENST00000604181 IRAK1P51617 712 aa17.38■□□□□ 0.37
CCDC12-210ENST00000604181 POM121L1PQ3SYA9 428 aa17.38■□□□□ 0.37
CCDC12-210ENST00000604181 ZNF658Q5TYW1 1059 aaPredicted RBP17.38■□□□□ 0.37
CCDC12-210ENST00000604181 TBC1D3GQ6DHY5 549 aa17.38■□□□□ 0.37
CCDC12-210ENST00000604181 TBC1D3CQ6IPX1 549 aa17.38■□□□□ 0.37
CCDC12-210ENST00000604181 NAPEPLDQ6IQ20 393 aa17.38■□□□□ 0.37
CCDC12-210ENST00000604181 DENND1BQ6P3S1 775 aa17.38■□□□□ 0.37
CCDC12-210ENST00000604181 CHSY1Q86X52 802 aa17.38■□□□□ 0.37
CCDC12-210ENST00000604181 TBC1D3Q8IZP1 549 aaPredicted RBP17.38■□□□□ 0.37
CCDC12-210ENST00000604181 SKA1Q96BD8 255 aa17.38■□□□□ 0.37
CCDC12-210ENST00000604181 KREMEN1Q96MU8 473 aa17.38■□□□□ 0.37
CCDC12-210ENST00000604181 TSG101Q99816 390 aa17.38■□□□□ 0.37
CCDC12-210ENST00000604181 TJP2Q9UDY2 1190 aa17.38■□□□□ 0.37
CCDC12-210ENST00000604181 CEP83Q9Y592 693 aa17.38■□□□□ 0.37
CCDC12-210ENST00000604181 TRIM38O00635 465 aa17.37■□□□□ 0.37
CCDC12-210ENST00000604181 YKT6O15498 198 aa17.37■□□□□ 0.37
CCDC12-210ENST00000604181 IGLV3-25P01717 112 aa17.37■□□□□ 0.37
CCDC12-210ENST00000604181 ARRB1P49407 418 aaPredicted RBP17.37■□□□□ 0.37
CCDC12-210ENST00000604181 SFSWAPQ12872 951 aaKnown RBP17.37■□□□□ 0.37
CCDC12-210ENST00000604181 EIF4EBP2Q13542 120 aaPredicted RBP17.37■□□□□ 0.37
CCDC12-210ENST00000604181 ELAVL3Q14576 367 aaKnown RBP17.37■□□□□ 0.37
CCDC12-210ENST00000604181 CXorf57Q6NSI4 855 aaKnown RBP17.37■□□□□ 0.37
CCDC12-210ENST00000604181 FMR1NBQ8N0W7 255 aaPredicted RBP17.37■□□□□ 0.37
CCDC12-210ENST00000604181 MFSD2AQ8NA29 543 aa17.37■□□□□ 0.37
CCDC12-210ENST00000604181 SNIP1Q8TAD8 396 aaKnown RBP17.37■□□□□ 0.37
CCDC12-210ENST00000604181 PRMT1Q99873 361 aaKnown RBP17.37■□□□□ 0.37
CCDC12-210ENST00000604181 NRSN2Q9GZP1 204 aa17.37■□□□□ 0.37
CCDC12-210ENST00000604181 ERVMER34-1Q9H9K5 563 aa17.37■□□□□ 0.37
CCDC12-210ENST00000604181 ST7Q9NRC1 585 aa17.37■□□□□ 0.37
CCDC12-210ENST00000604181 ATXN7O15265 892 aaPredicted RBP17.36■□□□□ 0.37
CCDC12-210ENST00000604181 BRINP1O60477 761 aa17.36■□□□□ 0.37
CCDC12-210ENST00000604181 MOCS3O95396 460 aa17.36■□□□□ 0.37
CCDC12-210ENST00000604181 CD44P16070 742 aaKnown RBP17.36■□□□□ 0.37
CCDC12-210ENST00000604181 CKMT2P17540 419 aa17.36■□□□□ 0.37
CCDC12-210ENST00000604181 INSM1Q01101 510 aaPredicted RBP17.36■□□□□ 0.37
CCDC12-210ENST00000604181 STILQ15468 1287 aa17.36■□□□□ 0.37
CCDC12-210ENST00000604181 TAF5Q15542 800 aa17.36■□□□□ 0.37
CCDC12-210ENST00000604181 PROX2Q3B8N5 592 aa17.36■□□□□ 0.37
CCDC12-210ENST00000604181 AGBL4Q5VU57 503 aa17.36■□□□□ 0.37
CCDC12-210ENST00000604181 RNF219Q5W0B1 726 aaPredicted RBP17.36■□□□□ 0.37
CCDC12-210ENST00000604181 PCSK4Q6UW60 755 aa17.36■□□□□ 0.37
CCDC12-210ENST00000604181 CCAR2Q8N163 923 aaKnown RBP17.36■□□□□ 0.37
CCDC12-210ENST00000604181 SPATA20Q8TB22 786 aa17.36■□□□□ 0.37
CCDC12-210ENST00000604181 ALG14Q96F25 216 aa17.36■□□□□ 0.37
CCDC12-210ENST00000604181 FCRL3Q96P31 734 aaPredicted RBP17.36■□□□□ 0.37
CCDC12-210ENST00000604181 ACP6Q9NPH0 428 aa17.36■□□□□ 0.37
CCDC12-210ENST00000604181 E5RJQ4 531 aa17.35■□□□□ 0.37
CCDC12-210ENST00000604181 RNF103O00237 685 aa17.35■□□□□ 0.37
CCDC12-210ENST00000604181 PMM2O15305 246 aa17.35■□□□□ 0.37
CCDC12-210ENST00000604181 PLRG1O43660 514 aaKnown RBP17.35■□□□□ 0.37
CCDC12-210ENST00000604181 TRUB2O95900 331 aaKnown RBP17.35■□□□□ 0.37
CCDC12-210ENST00000604181 TAS2R38P59533 333 aa17.35■□□□□ 0.37
CCDC12-210ENST00000604181 CENPCQ03188 943 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms