RNA–Protein interactions for RNA: ENST00000603946.5

NOLC1-208, Transcript of nucleolar and coiled-body phosphoprotein 1, humanhuman

TSL 1 (best)

Gene NOLC1, Length 3,217 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOLC1-208ENST00000603946 CA14Q9ULX7 337 aa8.36□□□□□ -1.07
NOLC1-208ENST00000603946 COL4A4P53420 1690 aaPredicted RBP8.36□□□□□ -1.07
NOLC1-208ENST00000603946 SHROOM3Q8TF72 1996 aa8.36□□□□□ -1.07
NOLC1-208ENST00000603946 HLA-FP30511 346 aa8.35□□□□□ -1.07
NOLC1-208ENST00000603946 PAPOLAP51003 745 aaKnown RBP8.35□□□□□ -1.07
NOLC1-208ENST00000603946 GAD2Q05329 585 aa8.35□□□□□ -1.07
NOLC1-208ENST00000603946 DHCR24Q15392 516 aa8.35□□□□□ -1.07
NOLC1-208ENST00000603946 GEN1Q17RS7 908 aa8.35□□□□□ -1.07
NOLC1-208ENST00000603946 TMEM31Q5JXX7 168 aa8.35□□□□□ -1.07
NOLC1-208ENST00000603946 PAPD7Q5XG87 772 aaKnown RBP8.35□□□□□ -1.07
NOLC1-208ENST00000603946 CAPN12Q6ZSI9 719 aa8.35□□□□□ -1.07
NOLC1-208ENST00000603946 MAP7D3Q8IWC1 876 aa8.35□□□□□ -1.07
NOLC1-208ENST00000603946 RCOR2Q8IZ40 523 aa8.35□□□□□ -1.07
NOLC1-208ENST00000603946 SPATA4Q8NEY3 305 aa8.35□□□□□ -1.07
NOLC1-208ENST00000603946 IFT81Q8WYA0 676 aa8.35□□□□□ -1.07
NOLC1-208ENST00000603946 ZNF419Q96HQ0 510 aaPredicted RBP8.35□□□□□ -1.07
NOLC1-208ENST00000603946 RIPOR3Q96MK2 946 aa8.35□□□□□ -1.07
NOLC1-208ENST00000603946 EPAS1Q99814 870 aa8.35□□□□□ -1.07
NOLC1-208ENST00000603946 STK39Q9UEW8 545 aa8.35□□□□□ -1.07
NOLC1-208ENST00000603946 VPS28Q9UK41 221 aa8.35□□□□□ -1.07
NOLC1-208ENST00000603946 FCF1Q9Y324 198 aaKnown RBP8.35□□□□□ -1.07
NOLC1-208ENST00000603946 APOL1O14791 398 aa8.35□□□□□ -1.07
NOLC1-208ENST00000603946 KCNN4O15554 427 aa8.35□□□□□ -1.07
NOLC1-208ENST00000603946 JCHAINP01591 159 aa8.35□□□□□ -1.07
NOLC1-208ENST00000603946 F7P08709 466 aaPredicted RBP8.35□□□□□ -1.07
NOLC1-208ENST00000603946 CSKP41240 450 aa8.35□□□□□ -1.07
NOLC1-208ENST00000603946 IFNAR2P48551 515 aa8.35□□□□□ -1.07
NOLC1-208ENST00000603946 KPNA1P52294 538 aaPredicted RBP8.35□□□□□ -1.07
NOLC1-208ENST00000603946 EIF3EP60228 445 aaKnown RBP8.35□□□□□ -1.07
NOLC1-208ENST00000603946 ITIH3Q06033 890 aa8.35□□□□□ -1.07
NOLC1-208ENST00000603946 EIF4EBP2Q13542 120 aaPredicted RBP8.35□□□□□ -1.07
NOLC1-208ENST00000603946 NUGGCQ68CJ6 796 aa8.35□□□□□ -1.07
NOLC1-208ENST00000603946 ELMSAN1Q6PJG2 1045 aa8.35□□□□□ -1.07
NOLC1-208ENST00000603946 OTOP3Q7RTS5 596 aa8.35□□□□□ -1.07
NOLC1-208ENST00000603946 NIPA2Q8N8Q9 360 aa8.35□□□□□ -1.07
NOLC1-208ENST00000603946 OLA1Q9NTK5 396 aaKnown RBP8.35□□□□□ -1.07
NOLC1-208ENST00000603946 ARHGEF38Q9NXL2 777 aa8.35□□□□□ -1.07
NOLC1-208ENST00000603946 MRFAP1Q9Y605 127 aa8.35□□□□□ -1.07
NOLC1-208ENST00000603946 CACNA1IQ9P0X4 2223 aa8.35□□□□□ -1.07
NOLC1-208ENST00000603946 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.35□□□□□ -1.07
NOLC1-208ENST00000603946 TBC1D3BA6NDS4 549 aa8.35□□□□□ -1.07
NOLC1-208ENST00000603946 PGRMC1O00264 195 aaKnown RBP8.35□□□□□ -1.07
NOLC1-208ENST00000603946 SMAD6O43541 496 aaKnown RBP8.35□□□□□ -1.07
NOLC1-208ENST00000603946 PRKCGP05129 697 aa8.35□□□□□ -1.07
NOLC1-208ENST00000603946 HOXB8P17481 243 aaPredicted RBP8.35□□□□□ -1.07
NOLC1-208ENST00000603946 FCARP24071 287 aa8.35□□□□□ -1.07
NOLC1-208ENST00000603946 PXNP49023 591 aaPredicted RBP8.35□□□□□ -1.07
NOLC1-208ENST00000603946 ZNF177Q13360 481 aaPredicted RBP8.35□□□□□ -1.07
NOLC1-208ENST00000603946 PCSK7Q16549 785 aa8.35□□□□□ -1.07
NOLC1-208ENST00000603946 DPYSL2Q16555 572 aa8.35□□□□□ -1.07
NOLC1-208ENST00000603946 KATNAL2Q8IYT4 538 aa8.35□□□□□ -1.07
NOLC1-208ENST00000603946 RYBPQ8N488 228 aaPredicted RBP8.35□□□□□ -1.07
NOLC1-208ENST00000603946 TSEN2Q8NCE0 465 aaKnown RBP8.35□□□□□ -1.07
NOLC1-208ENST00000603946 EXD1Q8NHP7 514 aa8.35□□□□□ -1.07
NOLC1-208ENST00000603946 SPATA22Q8NHS9 363 aa8.35□□□□□ -1.07
NOLC1-208ENST00000603946 IRF7Q92985 503 aa8.35□□□□□ -1.07
NOLC1-208ENST00000603946 CDCA3Q99618 268 aaPredicted RBP8.35□□□□□ -1.07
NOLC1-208ENST00000603946 TRMT61BQ9BVS5 477 aaKnown RBP8.35□□□□□ -1.07
NOLC1-208ENST00000603946 NOL6Q9H6R4 1146 aaKnown RBP8.35□□□□□ -1.07
NOLC1-208ENST00000603946 DMGDHQ9UI17 866 aaKnown RBP8.35□□□□□ -1.07
NOLC1-208ENST00000603946 A0A1W2PPC1 479 aa8.34□□□□□ -1.07
NOLC1-208ENST00000603946 RNF103O00237 685 aa8.34□□□□□ -1.07
NOLC1-208ENST00000603946 PLK4O00444 970 aa8.34□□□□□ -1.07
NOLC1-208ENST00000603946 PSTPIP1O43586 416 aa8.34□□□□□ -1.07
NOLC1-208ENST00000603946 PIRTP0C851 137 aa8.34□□□□□ -1.07
NOLC1-208ENST00000603946 EPHA5P54756 1037 aa8.34□□□□□ -1.07
NOLC1-208ENST00000603946 GSCP56915 257 aaPredicted RBP8.34□□□□□ -1.07
NOLC1-208ENST00000603946 SLC10A7Q0GE19 358 aa8.34□□□□□ -1.07
NOLC1-208ENST00000603946 POLD3Q15054 466 aaPredicted RBP8.34□□□□□ -1.07
NOLC1-208ENST00000603946 ATXN7L2Q5T6C5 722 aaPredicted RBP8.34□□□□□ -1.07
NOLC1-208ENST00000603946 TMEM215Q68D42 235 aa8.34□□□□□ -1.07
NOLC1-208ENST00000603946 MSANTD2Q6P1R3 559 aa8.34□□□□□ -1.07
NOLC1-208ENST00000603946 CCDC137Q6PK04 289 aaKnown RBP8.34□□□□□ -1.07
NOLC1-208ENST00000603946 SLC44A3Q8N4M1 653 aa8.34□□□□□ -1.07
NOLC1-208ENST00000603946 CELF5Q8N6W0 485 aaKnown RBP8.34□□□□□ -1.07
NOLC1-208ENST00000603946 NXPE3Q969Y0 559 aa8.34□□□□□ -1.07
NOLC1-208ENST00000603946 TRIM56Q9BRZ2 755 aaKnown RBP8.34□□□□□ -1.07
NOLC1-208ENST00000603946 ZYG11BQ9C0D3 744 aa8.34□□□□□ -1.07
NOLC1-208ENST00000603946 SLC6A17Q9H1V8 727 aa8.34□□□□□ -1.07
NOLC1-208ENST00000603946 ATP13A1Q9HD20 1204 aa8.34□□□□□ -1.07
NOLC1-208ENST00000603946 SPHK2Q9NRA0 654 aa8.34□□□□□ -1.07
NOLC1-208ENST00000603946 HSFX1Q9UBD0 423 aa8.34□□□□□ -1.07
NOLC1-208ENST00000603946 ARHGAP26Q9UNA1 814 aa8.34□□□□□ -1.07
NOLC1-208ENST00000603946 SNX24Q9Y343 169 aa8.34□□□□□ -1.07
NOLC1-208ENST00000603946 RAD54BQ9Y620 910 aa8.34□□□□□ -1.07
NOLC1-208ENST00000603946 MIF4GDA9UHW6 222 aaKnown RBP8.34□□□□□ -1.07
NOLC1-208ENST00000603946 H3BRJ5 948 aa8.34□□□□□ -1.07
NOLC1-208ENST00000603946 BANF1O75531 89 aa8.34□□□□□ -1.07
NOLC1-208ENST00000603946 MT-CYBP00156 380 aaPredicted RBP8.34□□□□□ -1.07
NOLC1-208ENST00000603946 CYP17A1P05093 508 aa8.34□□□□□ -1.07
NOLC1-208ENST00000603946 RHOCP08134 193 aa8.34□□□□□ -1.07
NOLC1-208ENST00000603946 PSMC3P17980 439 aa8.34□□□□□ -1.07
NOLC1-208ENST00000603946 TCP1P17987 556 aaKnown RBP8.34□□□□□ -1.07
NOLC1-208ENST00000603946 HOXD9P28356 352 aaPredicted RBP8.34□□□□□ -1.07
NOLC1-208ENST00000603946 HOXA9P31269 272 aa8.34□□□□□ -1.07
NOLC1-208ENST00000603946 HADHBP55084 474 aaKnown RBP8.34□□□□□ -1.07
NOLC1-208ENST00000603946 SLC7A9P82251 487 aa8.34□□□□□ -1.07
NOLC1-208ENST00000603946 PPP2R5DQ14738 602 aa8.34□□□□□ -1.07
NOLC1-208ENST00000603946 NOMO1Q15155 1222 aa8.34□□□□□ -1.07
NOLC1-208ENST00000603946 ZNF77Q15935 545 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms