RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 TTKP33981 857 aa9.77□□□□□ -0.85
CSMD1-217ENST00000602723 RPL14P50914 215 aaKnown RBP9.77□□□□□ -0.85
CSMD1-217ENST00000602723 KPNA1P52294 538 aaPredicted RBP9.77□□□□□ -0.85
CSMD1-217ENST00000602723 ARF5P84085 180 aa9.77□□□□□ -0.85
CSMD1-217ENST00000602723 TAF5Q15542 800 aa9.77□□□□□ -0.85
CSMD1-217ENST00000602723 TAF13Q15543 124 aa9.77□□□□□ -0.85
CSMD1-217ENST00000602723 GNASQ5JWF2 1037 aa9.77□□□□□ -0.85
CSMD1-217ENST00000602723 IL27RAQ6UWB1 636 aa9.77□□□□□ -0.85
CSMD1-217ENST00000602723 GPSM1Q86YR5 675 aa9.77□□□□□ -0.85
CSMD1-217ENST00000602723 KCNH1O95259 989 aa9.77□□□□□ -0.85
CSMD1-217ENST00000602723 IDH2P48735 452 aaKnown RBP9.77□□□□□ -0.85
CSMD1-217ENST00000602723 NUMBP49757 651 aa9.77□□□□□ -0.85
CSMD1-217ENST00000602723 EPS8Q12929 822 aa9.77□□□□□ -0.85
CSMD1-217ENST00000602723 TAF1CQ15572 869 aaPredicted RBP9.77□□□□□ -0.85
CSMD1-217ENST00000602723 SEZ6Q53EL9 994 aa9.77□□□□□ -0.85
CSMD1-217ENST00000602723 SLC45A4Q5BKX6 768 aa9.77□□□□□ -0.85
CSMD1-217ENST00000602723 ABRAXAS1Q6UWZ7 409 aa9.77□□□□□ -0.85
CSMD1-217ENST00000602723 EMC1Q8N766 993 aa9.77□□□□□ -0.85
CSMD1-217ENST00000602723 STARD8Q92502 1023 aa9.77□□□□□ -0.85
CSMD1-217ENST00000602723 CPB2Q96IY4 423 aa9.77□□□□□ -0.85
CSMD1-217ENST00000602723 S100A13Q99584 98 aa9.77□□□□□ -0.85
CSMD1-217ENST00000602723 CRNNQ9UBG3 495 aaPredicted RBP9.77□□□□□ -0.85
CSMD1-217ENST00000602723 ZNF222Q9UK12 451 aa9.77□□□□□ -0.85
CSMD1-217ENST00000602723 SH3GLB1Q9Y371 365 aa9.77□□□□□ -0.85
CSMD1-217ENST00000602723 NFIXQ14938 502 aa9.77□□□□□ -0.85
CSMD1-217ENST00000602723 OLFML1Q6UWY5 402 aa9.77□□□□□ -0.85
CSMD1-217ENST00000602723 AP3S1Q92572 193 aa9.77□□□□□ -0.85
CSMD1-217ENST00000602723 LENG1Q96BZ8 264 aaPredicted RBP9.77□□□□□ -0.85
CSMD1-217ENST00000602723 CELF6Q96J87 481 aaKnown RBP9.77□□□□□ -0.85
CSMD1-217ENST00000602723 PLEKHG4BQ96PX9 1271 aa9.77□□□□□ -0.85
CSMD1-217ENST00000602723 CYP3A43Q9HB55 503 aa9.77□□□□□ -0.85
CSMD1-217ENST00000602723 ZNF318Q5VUA4 2279 aa9.77□□□□□ -0.85
CSMD1-217ENST00000602723 MGAT1P26572 445 aa9.77□□□□□ -0.85
CSMD1-217ENST00000602723 CCR4P51679 360 aa9.77□□□□□ -0.85
CSMD1-217ENST00000602723 MSLNQ13421 630 aaPredicted RBP9.77□□□□□ -0.85
CSMD1-217ENST00000602723 ABRAQ8N0Z2 381 aa9.77□□□□□ -0.85
CSMD1-217ENST00000602723 HTR3CQ8WXA8 447 aa9.77□□□□□ -0.85
CSMD1-217ENST00000602723 TMEM176AQ96HP8 235 aa9.77□□□□□ -0.85
CSMD1-217ENST00000602723 TEKT5Q96M29 485 aa9.77□□□□□ -0.85
CSMD1-217ENST00000602723 NLNQ9BYT8 704 aa9.77□□□□□ -0.85
CSMD1-217ENST00000602723 TMEM138Q9NPI0 162 aa9.77□□□□□ -0.85
CSMD1-217ENST00000602723 TAS2R13Q9NYV9 303 aa9.77□□□□□ -0.85
CSMD1-217ENST00000602723 VPS51Q9UID3 782 aa9.77□□□□□ -0.85
CSMD1-217ENST00000602723 PSMD4P55036 377 aaKnown RBP9.76□□□□□ -0.85
CSMD1-217ENST00000602723 MARK2Q7KZI7 788 aaKnown RBP9.76□□□□□ -0.85
CSMD1-217ENST00000602723 TTC7BQ86TV6 843 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 NT5DC4Q86YG4 428 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 RAB21Q9UL25 225 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 CDH9Q9ULB4 789 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 INVSQ9Y283 1065 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 SLC25A27O95847 323 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 NPR3P17342 541 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 CCR1P32246 355 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 RPA3P35244 121 aaPredicted RBP9.76□□□□□ -0.85
CSMD1-217ENST00000602723 SPIRE1Q08AE8 756 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 PSMA8Q8TAA3 256 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 CEP41Q9BYV8 373 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 ZCCHC2Q9C0B9 1178 aaKnown RBP9.76□□□□□ -0.85
CSMD1-217ENST00000602723 KHDRBS3O75525 346 aaKnown RBP9.76□□□□□ -0.85
CSMD1-217ENST00000602723 S100A3P33764 101 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 FAM187BQ17R55 369 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 MTMR8Q96EF0 704 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 MCUBQ9NWR8 336 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 RPS6KA6Q9UK32 745 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 GSTK1Q9Y2Q3 226 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 BOP1Q14137 746 aaKnown RBP9.76□□□□□ -0.85
CSMD1-217ENST00000602723 MCOLN2Q8IZK6 566 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 MAGEE2Q8TD90 523 aaPredicted RBP9.76□□□□□ -0.85
CSMD1-217ENST00000602723 TMEM159Q96B96 161 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 PIH1D1Q9NWS0 290 aaKnown RBP9.76□□□□□ -0.85
CSMD1-217ENST00000602723 PFKFB4Q16877 469 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 FOXR1Q6PIV2 292 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 TAS1R2Q8TE23 839 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 USP7Q93009 1102 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 MYLPFQ96A32 169 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 TBCDQ9BTW9 1192 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 ITGA11Q9UKX5 1188 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 RHOCP08134 193 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 UQCRBP14927 111 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 MYL6P60660 151 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 ACAP1Q15027 740 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 METTL6Q8TCB7 284 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 TBCBQ99426 244 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 EPB41L1Q9H4G0 881 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 MAPRE3Q9UPY8 281 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 CNTNAP2Q9UHC6 1331 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 UBE2QL1A1L167 161 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 RGS14O43566 566 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 ENTPD3O75355 529 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 TMC7Q7Z402 723 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 RBM22Q9NW64 420 aaKnown RBP eCLIP9.76□□□□□ -0.85
CSMD1-217ENST00000602723 LHX1P48742 406 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 PDK3Q15120 406 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 RBM43Q6ZSC3 357 aaKnown RBP9.76□□□□□ -0.85
CSMD1-217ENST00000602723 GLT6D1Q7Z4J2 308 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 TMC2Q8TDI7 906 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 MRPS31Q92665 395 aaKnown RBP9.76□□□□□ -0.85
CSMD1-217ENST00000602723 Q96MT0 163 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 COLEC11Q9BWP8 271 aa9.76□□□□□ -0.85
CSMD1-217ENST00000602723 CLN6Q9NWW5 311 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms