RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 PRAMEF14Q5SWL7 426 aa13.58□□□□□ -0.24
RPS28-204ENST00000602140 TRIM65Q6PJ69 517 aa13.58□□□□□ -0.24
RPS28-204ENST00000602140 SND1Q7KZF4 910 aaKnown RBP eCLIP13.58□□□□□ -0.24
RPS28-204ENST00000602140 MARCH9Q86YJ5 346 aa13.58□□□□□ -0.24
RPS28-204ENST00000602140 DEFB106AQ8N104 65 aa13.58□□□□□ -0.24
RPS28-204ENST00000602140 CCAR2Q8N163 923 aaKnown RBP13.58□□□□□ -0.24
RPS28-204ENST00000602140 AADATQ8N5Z0 425 aa13.58□□□□□ -0.24
RPS28-204ENST00000602140 OR14C36Q8NHC7 312 aa13.58□□□□□ -0.24
RPS28-204ENST00000602140 PTPRN2Q92932 1015 aa13.58□□□□□ -0.24
RPS28-204ENST00000602140 CPXM1Q96SM3 734 aa13.58□□□□□ -0.24
RPS28-204ENST00000602140 PRMT1Q99873 361 aaKnown RBP13.58□□□□□ -0.24
RPS28-204ENST00000602140 FAM204AQ9H8W3 233 aa13.58□□□□□ -0.24
RPS28-204ENST00000602140 AASDHPPTQ9NRN7 309 aa13.58□□□□□ -0.24
RPS28-204ENST00000602140 DDIT4Q9NX09 232 aa13.58□□□□□ -0.24
RPS28-204ENST00000602140 COX16Q9P0S2 106 aa13.58□□□□□ -0.24
RPS28-204ENST00000602140 PLXNB3Q9ULL4 1909 aa13.58□□□□□ -0.24
RPS28-204ENST00000602140 PLXNA2O75051 1894 aa13.57□□□□□ -0.24
RPS28-204ENST00000602140 ITPR1Q14643 2758 aa13.57□□□□□ -0.24
RPS28-204ENST00000602140 A0A1B0GTQ1 180 aa13.57□□□□□ -0.24
RPS28-204ENST00000602140 GRAP2O75791 330 aa13.57□□□□□ -0.24
RPS28-204ENST00000602140 ADH1BP00325 375 aa13.57□□□□□ -0.24
RPS28-204ENST00000602140 IL1BP01584 269 aa13.57□□□□□ -0.24
RPS28-204ENST00000602140 SLC2A3P11169 496 aa13.57□□□□□ -0.24
RPS28-204ENST00000602140 GOT1P17174 413 aa13.57□□□□□ -0.24
RPS28-204ENST00000602140 ABCB4P21439 1286 aa13.57□□□□□ -0.24
RPS28-204ENST00000602140 C5AR1P21730 350 aa13.57□□□□□ -0.24
RPS28-204ENST00000602140 CD38P28907 300 aa13.57□□□□□ -0.24
RPS28-204ENST00000602140 CCR1P32246 355 aa13.57□□□□□ -0.24
RPS28-204ENST00000602140 CCR5P51681 352 aa13.57□□□□□ -0.24
RPS28-204ENST00000602140 ADPRHP54922 357 aa13.57□□□□□ -0.24
RPS28-204ENST00000602140 ELAVL3Q14576 367 aaKnown RBP13.57□□□□□ -0.24
RPS28-204ENST00000602140 INAVAQ3KP66 663 aa13.57□□□□□ -0.24
RPS28-204ENST00000602140 RABGAP1LQ5R372 815 aa13.57□□□□□ -0.24
RPS28-204ENST00000602140 GATAD2AQ86YP4 633 aa13.57□□□□□ -0.24
RPS28-204ENST00000602140 PASD1Q8IV76 773 aa13.57□□□□□ -0.24
RPS28-204ENST00000602140 GALNT15Q8N3T1 639 aa13.57□□□□□ -0.24
RPS28-204ENST00000602140 WDTC1Q8N5D0 677 aa13.57□□□□□ -0.24
RPS28-204ENST00000602140 RNF34Q969K3 372 aa13.57□□□□□ -0.24
RPS28-204ENST00000602140 SKA1Q96BD8 255 aa13.57□□□□□ -0.24
RPS28-204ENST00000602140 PPP1R13BQ96KQ4 1090 aa13.57□□□□□ -0.24
RPS28-204ENST00000602140 FAM81BQ96LP2 452 aa13.57□□□□□ -0.24
RPS28-204ENST00000602140 APEX2Q9UBZ4 518 aa13.57□□□□□ -0.24
RPS28-204ENST00000602140 GPSM3Q9Y4H4 160 aa13.57□□□□□ -0.24
RPS28-204ENST00000602140 ANKRD11Q6UB99 2663 aaPredicted RBP13.57□□□□□ -0.24
RPS28-204ENST00000602140 KNL1Q8NG31 2342 aa13.57□□□□□ -0.24
RPS28-204ENST00000602140 PTPRBP23467 1997 aa13.56□□□□□ -0.24
RPS28-204ENST00000602140 LAMA5O15230 3695 aa13.56□□□□□ -0.24
RPS28-204ENST00000602140 A0A1B0GVM2 712 aa13.56□□□□□ -0.24
RPS28-204ENST00000602140 TCAF2A6NFQ2 919 aa13.56□□□□□ -0.24
RPS28-204ENST00000602140 C10orf142B7Z368 130 aa13.56□□□□□ -0.24
RPS28-204ENST00000602140 WNT9AO14904 365 aa13.56□□□□□ -0.24
RPS28-204ENST00000602140 GLI1P08151 1106 aa13.56□□□□□ -0.24
RPS28-204ENST00000602140 CENPCQ03188 943 aa13.56□□□□□ -0.24
RPS28-204ENST00000602140 SULT2A1Q06520 285 aa13.56□□□□□ -0.24
RPS28-204ENST00000602140 EXOC3L4Q17RC7 722 aa13.56□□□□□ -0.24
RPS28-204ENST00000602140 EFHC1Q5JVL4 640 aa13.56□□□□□ -0.24
RPS28-204ENST00000602140 TTC39BQ5VTQ0 682 aaPredicted RBP13.56□□□□□ -0.24
RPS28-204ENST00000602140 CXorf57Q6NSI4 855 aaKnown RBP13.56□□□□□ -0.24
RPS28-204ENST00000602140 FBXL22Q6P050 247 aa13.56□□□□□ -0.24
RPS28-204ENST00000602140 C19orf48Q6RUI8 117 aa13.56□□□□□ -0.24
RPS28-204ENST00000602140 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.56□□□□□ -0.24
RPS28-204ENST00000602140 GBP6Q6ZN66 633 aa13.56□□□□□ -0.24
RPS28-204ENST00000602140 SERAC1Q96JX3 654 aa13.56□□□□□ -0.24
RPS28-204ENST00000602140 RPRD1AQ96P16 312 aaPredicted RBP13.56□□□□□ -0.24
RPS28-204ENST00000602140 SLC2A13Q96QE2 648 aa13.56□□□□□ -0.24
RPS28-204ENST00000602140 SPAG5Q96R06 1193 aa13.56□□□□□ -0.24
RPS28-204ENST00000602140 ELF4Q99607 663 aaPredicted RBP13.56□□□□□ -0.24
RPS28-204ENST00000602140 ASNSD1Q9NWL6 643 aa13.56□□□□□ -0.24
RPS28-204ENST00000602140 FTSJ1Q9UET6 329 aa13.56□□□□□ -0.24
RPS28-204ENST00000602140 RWDD2AQ9UIY3 292 aa13.56□□□□□ -0.24
RPS28-204ENST00000602140 TBC1D3DA0A087WVF3 549 aa13.55□□□□□ -0.24
RPS28-204ENST00000602140 TBC1D3IA0A087WXS9 549 aa13.55□□□□□ -0.24
RPS28-204ENST00000602140 TBC1D3EA0A087X179 549 aa13.55□□□□□ -0.24
RPS28-204ENST00000602140 TBC1D3KA0A087X1G2 549 aa13.55□□□□□ -0.24
RPS28-204ENST00000602140 A0A1W2PR77 199 aa13.55□□□□□ -0.24
RPS28-204ENST00000602140 FAM149AA5PLN7 773 aa13.55□□□□□ -0.24
RPS28-204ENST00000602140 TBC1D3FA6NER0 549 aaPredicted RBP13.55□□□□□ -0.24
RPS28-204ENST00000602140 TBC1D3LB9A6J9 549 aa13.55□□□□□ -0.24
RPS28-204ENST00000602140 PLK4O00444 970 aa13.55□□□□□ -0.24
RPS28-204ENST00000602140 HSF2BPO75031 334 aa13.55□□□□□ -0.24
RPS28-204ENST00000602140 TBC1D3HP0C7X1 549 aa13.55□□□□□ -0.24
RPS28-204ENST00000602140 PON1P27169 355 aa13.55□□□□□ -0.24
RPS28-204ENST00000602140 DRD3P35462 400 aa13.55□□□□□ -0.24
RPS28-204ENST00000602140 IRAK1P51617 712 aa13.55□□□□□ -0.24
RPS28-204ENST00000602140 PLK1P53350 603 aa13.55□□□□□ -0.24
RPS28-204ENST00000602140 METAP1P53582 386 aa13.55□□□□□ -0.24
RPS28-204ENST00000602140 OXCT1P55809 520 aa13.55□□□□□ -0.24
RPS28-204ENST00000602140 PPP2CBP62714 309 aa13.55□□□□□ -0.24
RPS28-204ENST00000602140 PPP2CAP67775 309 aa13.55□□□□□ -0.24
RPS28-204ENST00000602140 NME3Q13232 169 aa13.55□□□□□ -0.24
RPS28-204ENST00000602140 AUHQ13825 339 aaKnown RBP13.55□□□□□ -0.24
RPS28-204ENST00000602140 CAMK4Q16566 473 aa13.55□□□□□ -0.24
RPS28-204ENST00000602140 ACCSLQ4AC99 568 aa13.55□□□□□ -0.24
RPS28-204ENST00000602140 TBC1D3GQ6DHY5 549 aa13.55□□□□□ -0.24
RPS28-204ENST00000602140 OR6B2Q6IFH4 312 aa13.55□□□□□ -0.24
RPS28-204ENST00000602140 TBC1D3CQ6IPX1 549 aa13.55□□□□□ -0.24
RPS28-204ENST00000602140 DHRS13Q6UX07 377 aa13.55□□□□□ -0.24
RPS28-204ENST00000602140 C11orf57Q6ZUT1 292 aaPredicted RBP13.55□□□□□ -0.24
RPS28-204ENST00000602140 FAM183BPQ6ZVS7 135 aa13.55□□□□□ -0.24
RPS28-204ENST00000602140 TBC1D3Q8IZP1 549 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms