RNA–Protein interactions for RNA: ENST00000601665.5

NUP62-223, Transcript of nucleoporin 62, human

TSL 5

Gene NUP62, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-223	ENST00000601665	USP28	Q96RU2	1077 aa		12.7	□□□□□ -0.38
NUP62-223	ENST00000601665	CCNL2	Q96S94	520 aa	Predicted RBP	12.7	□□□□□ -0.38
NUP62-223	ENST00000601665	MYOC	Q99972	504 aa		12.7	□□□□□ -0.38
NUP62-223	ENST00000601665	DUSP23	Q9BVJ7	150 aa		12.7	□□□□□ -0.38
NUP62-223	ENST00000601665	MAGEF1	Q9HAY2	307 aa		12.7	□□□□□ -0.38
NUP62-223	ENST00000601665	APOBEC3G	Q9HC16	384 aa	Known RBP	12.7	□□□□□ -0.38
NUP62-223	ENST00000601665	NLGN3	Q9NZ94	848 aa		12.7	□□□□□ -0.38
NUP62-223	ENST00000601665	ARHGAP20	Q9P2F6	1191 aa		12.7	□□□□□ -0.38
NUP62-223	ENST00000601665	HESX1	Q9UBX0	185 aa		12.7	□□□□□ -0.38
NUP62-223	ENST00000601665	SEPT3	Q9UH03	358 aa		12.7	□□□□□ -0.38
NUP62-223	ENST00000601665	SLCO3A1	Q9UIG8	710 aa		12.7	□□□□□ -0.38
NUP62-223	ENST00000601665	CA5B	Q9Y2D0	317 aa		12.7	□□□□□ -0.38
NUP62-223	ENST00000601665	CPED1	A4D0V7	1026 aa		12.69	□□□□□ -0.38
NUP62-223	ENST00000601665	YJEFN3	A6XGL0	299 aa		12.69	□□□□□ -0.38
NUP62-223	ENST00000601665		E7ENQ6	273 aa		12.69	□□□□□ -0.38
NUP62-223	ENST00000601665	TERT	O14746	1132 aa	Known RBP	12.69	□□□□□ -0.38
NUP62-223	ENST00000601665	PLRG1	O43660	514 aa	Known RBP	12.69	□□□□□ -0.38
NUP62-223	ENST00000601665	RNGTT	O60942	597 aa	Known RBP	12.69	□□□□□ -0.38
NUP62-223	ENST00000601665	GJB6	O95452	261 aa		12.69	□□□□□ -0.38
NUP62-223	ENST00000601665	MYF5	P13349	255 aa		12.69	□□□□□ -0.38
NUP62-223	ENST00000601665	ZNF18	P17022	549 aa		12.69	□□□□□ -0.38
NUP62-223	ENST00000601665	SLC6A4	P31645	630 aa		12.69	□□□□□ -0.38
NUP62-223	ENST00000601665	VAMP7	P51809	220 aa		12.69	□□□□□ -0.38
NUP62-223	ENST00000601665	TBX4	P57082	545 aa		12.69	□□□□□ -0.38
NUP62-223	ENST00000601665	RPS24	P62847	133 aa	Known RBP	12.69	□□□□□ -0.38
NUP62-223	ENST00000601665	NUCB2	P80303	420 aa		12.69	□□□□□ -0.38
NUP62-223	ENST00000601665	NFKB2	Q00653	900 aa		12.69	□□□□□ -0.38
NUP62-223	ENST00000601665	KCNMA1	Q12791	1236 aa		12.69	□□□□□ -0.38
NUP62-223	ENST00000601665	GOLGA7B	Q2TAP0	167 aa		12.69	□□□□□ -0.38
NUP62-223	ENST00000601665	FAM133B	Q5BKY9	247 aa	Known RBP	12.69	□□□□□ -0.38
NUP62-223	ENST00000601665	XKR5	Q6UX68	686 aa		12.69	□□□□□ -0.38
NUP62-223	ENST00000601665	MMS22L	Q6ZRQ5	1243 aa		12.69	□□□□□ -0.38
NUP62-223	ENST00000601665	USP53	Q70EK8	1073 aa		12.69	□□□□□ -0.38
NUP62-223	ENST00000601665	TRIM69	Q86WT6	500 aa		12.69	□□□□□ -0.38
NUP62-223	ENST00000601665	SLC9A9	Q8IVB4	645 aa		12.69	□□□□□ -0.38
NUP62-223	ENST00000601665	TAS1R2	Q8TE23	839 aa		12.69	□□□□□ -0.38
NUP62-223	ENST00000601665	ATXN7L3B	Q96GX2	97 aa		12.69	□□□□□ -0.38
NUP62-223	ENST00000601665	RPL10L	Q96L21	214 aa	Known RBP	12.69	□□□□□ -0.38
NUP62-223	ENST00000601665	SPAG5	Q96R06	1193 aa		12.69	□□□□□ -0.38
NUP62-223	ENST00000601665	INTS6	Q9UL03	887 aa	Known RBP	12.69	□□□□□ -0.38
NUP62-223	ENST00000601665	PCDHGA8	Q9Y5G5	932 aa		12.69	□□□□□ -0.38
NUP62-223	ENST00000601665	ITIH6	Q6UXX5	1313 aa		12.68	□□□□□ -0.38
NUP62-223	ENST00000601665	PVALEF	A0A1B0GWK0	134 aa		12.68	□□□□□ -0.38
NUP62-223	ENST00000601665	C10orf142	B7Z368	130 aa		12.68	□□□□□ -0.38
NUP62-223	ENST00000601665	C1QTNF3-AMACR	E9PGA6	284 aa		12.68	□□□□□ -0.38
NUP62-223	ENST00000601665	XPO1	O14980	1071 aa	Known RBP	12.68	□□□□□ -0.38
NUP62-223	ENST00000601665	SLC31A1	O15431	190 aa		12.68	□□□□□ -0.38
NUP62-223	ENST00000601665	PIAS2	O75928	621 aa		12.68	□□□□□ -0.38
NUP62-223	ENST00000601665	CENPB	P07199	599 aa	Predicted RBP	12.68	□□□□□ -0.38
NUP62-223	ENST00000601665	TRIM49	P0CI25	452 aa		12.68	□□□□□ -0.38
NUP62-223	ENST00000601665	TRIM49C	P0CI26	452 aa		12.68	□□□□□ -0.38
NUP62-223	ENST00000601665	KRT13	P13646	458 aa		12.68	□□□□□ -0.38
NUP62-223	ENST00000601665	CASP1	P29466	404 aa		12.68	□□□□□ -0.38
NUP62-223	ENST00000601665	DRD3	P35462	400 aa		12.68	□□□□□ -0.38
NUP62-223	ENST00000601665	INHBC	P55103	352 aa		12.68	□□□□□ -0.38
NUP62-223	ENST00000601665	ARL13B	Q3SXY8	428 aa		12.68	□□□□□ -0.38
NUP62-223	ENST00000601665	ARHGAP17	Q68EM7	881 aa		12.68	□□□□□ -0.38
NUP62-223	ENST00000601665	RBM44	Q6ZP01	1051 aa	Known RBP	12.68	□□□□□ -0.38
NUP62-223	ENST00000601665	EXD3	Q8N9H8	876 aa		12.68	□□□□□ -0.38
NUP62-223	ENST00000601665	SLC4A11	Q8NBS3	891 aa		12.68	□□□□□ -0.38
NUP62-223	ENST00000601665	TPCN2	Q8NHX9	752 aa		12.68	□□□□□ -0.38
NUP62-223	ENST00000601665	OR8D1	Q8WZ84	308 aa		12.68	□□□□□ -0.38
NUP62-223	ENST00000601665	PTPRN2	Q92932	1015 aa		12.68	□□□□□ -0.38
NUP62-223	ENST00000601665	TATDN2	Q93075	761 aa		12.68	□□□□□ -0.38
NUP62-223	ENST00000601665	LMLN	Q96KR4	655 aa		12.68	□□□□□ -0.38
NUP62-223	ENST00000601665	CISH	Q9NSE2	258 aa		12.68	□□□□□ -0.38
NUP62-223	ENST00000601665	EXOC1	Q9NV70	894 aa		12.68	□□□□□ -0.38
NUP62-223	ENST00000601665	DMAC2	Q9NW81	257 aa		12.68	□□□□□ -0.38
NUP62-223	ENST00000601665	DNAJC28	Q9NX36	388 aa		12.68	□□□□□ -0.38
NUP62-223	ENST00000601665	NCKIPSD	Q9NZQ3	722 aa		12.68	□□□□□ -0.38
NUP62-223	ENST00000601665	TJP2	Q9UDY2	1190 aa		12.68	□□□□□ -0.38
NUP62-223	ENST00000601665	SSUH2	Q9Y2M2	353 aa		12.68	□□□□□ -0.38
NUP62-223	ENST00000601665	MORC2	Q9Y6X9	1032 aa	Predicted RBP	12.68	□□□□□ -0.38
NUP62-223	ENST00000601665	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	12.67	□□□□□ -0.38
NUP62-223	ENST00000601665	TULP2	O00295	520 aa		12.67	□□□□□ -0.38
NUP62-223	ENST00000601665	TNFSF15	O95150	251 aa		12.67	□□□□□ -0.38
NUP62-223	ENST00000601665	LUC7L3	O95232	432 aa	Known RBP	12.67	□□□□□ -0.38
NUP62-223	ENST00000601665	CD2BP2	O95400	341 aa	Known RBP	12.67	□□□□□ -0.38
NUP62-223	ENST00000601665	SFTPC	P11686	197 aa		12.67	□□□□□ -0.38
NUP62-223	ENST00000601665	LCP1	P13796	627 aa		12.67	□□□□□ -0.38
NUP62-223	ENST00000601665	CD19	P15391	556 aa		12.67	□□□□□ -0.38
NUP62-223	ENST00000601665	PRLR	P16471	622 aa		12.67	□□□□□ -0.38
NUP62-223	ENST00000601665	TGM2	P21980	687 aa		12.67	□□□□□ -0.38
NUP62-223	ENST00000601665	AKT2	P31751	481 aa		12.67	□□□□□ -0.38
NUP62-223	ENST00000601665	AFM	P43652	599 aa		12.67	□□□□□ -0.38
NUP62-223	ENST00000601665	STK19	P49842	368 aa	Predicted RBP	12.67	□□□□□ -0.38
NUP62-223	ENST00000601665	HNRNPK	P61978	463 aa	Known RBP eCLIP	12.67	□□□□□ -0.38	3e-6	■■■■□ 20.5
NUP62-223	ENST00000601665	BST2	Q10589	180 aa	Known RBP	12.67	□□□□□ -0.38
NUP62-223	ENST00000601665	CNTN1	Q12860	1018 aa		12.67	□□□□□ -0.38
NUP62-223	ENST00000601665	CLN3	Q13286	438 aa		12.67	□□□□□ -0.38
NUP62-223	ENST00000601665	ZNF177	Q13360	481 aa	Predicted RBP	12.67	□□□□□ -0.38
NUP62-223	ENST00000601665	CDKN3	Q16667	212 aa		12.67	□□□□□ -0.38
NUP62-223	ENST00000601665	ACCSL	Q4AC99	568 aa		12.67	□□□□□ -0.38
NUP62-223	ENST00000601665	FSCB	Q5H9T9	825 aa		12.67	□□□□□ -0.38
NUP62-223	ENST00000601665	INTS8	Q75QN2	995 aa	Known RBP	12.67	□□□□□ -0.38
NUP62-223	ENST00000601665	BHLHA9	Q7RTU4	235 aa		12.67	□□□□□ -0.38
NUP62-223	ENST00000601665	CFAP52	Q8N1V2	620 aa		12.67	□□□□□ -0.38
NUP62-223	ENST00000601665	WDR36	Q8NI36	951 aa	Known RBP	12.67	□□□□□ -0.38
NUP62-223	ENST00000601665	EXTL1	Q92935	676 aa		12.67	□□□□□ -0.38
NUP62-223	ENST00000601665	AZIN2	Q96A70	460 aa		12.67	□□□□□ -0.38

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