RNA–Protein interactions for RNA: ENST00000601538.5

SHANK2-218, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHANK2, Length 9,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-218ENST00000601538 TPD52L3Q96J77 140 aa12.45□□□□□ -0.42
SHANK2-218ENST00000601538 CCNE2O96020 404 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 SERPINA6P08185 405 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 EPC2Q52LR7 807 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 PGBD2Q6P3X8 592 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 MSANTD1Q6ZTZ1 278 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 KDELC2Q7Z4H8 507 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 SLC44A2Q8IWA5 706 aaPredicted RBP12.44□□□□□ -0.42
SHANK2-218ENST00000601538 SMYD1Q8NB12 490 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 HM13Q8TCT9 377 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 SPAG4Q9NPE6 437 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 AGPAT5Q9NUQ2 364 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 NUP50Q9UKX7 468 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 ST3GAL5Q9UNP4 418 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 PCDHA10Q9Y5I2 948 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 LMO7Q8WWI1 1683 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 TBX3O15119 743 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 KCNH1O95259 989 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 ETS1P14921 441 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 ETFBP38117 255 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 ALDH3A2P51648 485 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 TRIM32Q13049 653 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 CNPY1Q3B7I2 92 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 SPPL2AQ8TCT8 520 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 IRX2Q9BZI1 471 aaPredicted RBP12.44□□□□□ -0.42
SHANK2-218ENST00000601538 ZNF518BQ9C0D4 1074 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 TRNAU1APQ9NX07 287 aaKnown RBP12.44□□□□□ -0.42
SHANK2-218ENST00000601538 ARHGEF28Q8N1W1 1705 aaKnown RBP12.44□□□□□ -0.42
SHANK2-218ENST00000601538 PDPK1O15530 556 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 SDC2P34741 201 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 DDX53Q86TM3 631 aaKnown RBP12.44□□□□□ -0.42
SHANK2-218ENST00000601538 LRRC20Q8TCA0 184 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 C12orf66Q96MD2 445 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 CCDC115Q96NT0 180 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 KIAA1683Q9H0B3 1180 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 SCN9AQ15858 1988 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 CLDN25C9JDP6 229 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 BNIP2Q12982 314 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 PPIL2Q13356 520 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 TTMPQ5BVD1 217 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 RPTNQ6XPR3 784 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 ZNF276Q8N554 614 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 VCPIP1Q96JH7 1222 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 ITGA2BP08514 1039 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 PRG2P13727 222 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 C6orf52Q5T4I8 152 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.44□□□□□ -0.42
SHANK2-218ENST00000601538 CDH19Q9H159 772 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 SNX7Q9UNH6 387 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 REM1O75628 298 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 FAM228BP0C875 321 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 CYP24A1Q07973 514 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 CBFBQ13951 182 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 HERC3Q15034 1050 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 USF2Q15853 346 aaPredicted RBP12.44□□□□□ -0.42
SHANK2-218ENST00000601538 PRR5LQ6MZQ0 368 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 FAM92BQ6ZTR7 304 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 KBTBD2Q8IY47 623 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 SLC6A15Q9H2J7 730 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 CHMP1AQ9HD42 196 aaPredicted RBP12.44□□□□□ -0.42
SHANK2-218ENST00000601538 SEC31BQ9NQW1 1179 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 FAM49BQ9NUQ9 324 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 PRKAG3Q9UGI9 489 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 VPS51Q9UID3 782 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 DOLKQ9UPQ8 538 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 POLR1DQ9Y2S0 133 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 PABPC4LP0CB38 370 aaKnown RBP12.44□□□□□ -0.42
SHANK2-218ENST00000601538 PTPN1P18031 435 aaKnown RBP12.44□□□□□ -0.42
SHANK2-218ENST00000601538 PNPLA4P41247 253 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 EMC1Q8N766 993 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 HPSEQ9Y251 543 aa12.44□□□□□ -0.42
SHANK2-218ENST00000601538 ZNF701M0R085 212 aaPredicted RBP12.43□□□□□ -0.42
SHANK2-218ENST00000601538 FCHO1O14526 889 aa12.43□□□□□ -0.42
SHANK2-218ENST00000601538 DNAJB5O75953 348 aa12.43□□□□□ -0.42
SHANK2-218ENST00000601538 FCER1AP12319 257 aa12.43□□□□□ -0.42
SHANK2-218ENST00000601538 ANPEPP15144 967 aa12.43□□□□□ -0.42
SHANK2-218ENST00000601538 EIF5AP63241 154 aaKnown RBP12.43□□□□□ -0.42
SHANK2-218ENST00000601538 DGCR6Q14129 220 aa12.43□□□□□ -0.42
SHANK2-218ENST00000601538 SMAD1Q15797 465 aaKnown RBP12.43□□□□□ -0.42
SHANK2-218ENST00000601538 POMGNT2Q8NAT1 580 aa12.43□□□□□ -0.42
SHANK2-218ENST00000601538 PRCCQ92733 491 aaPredicted RBP12.43□□□□□ -0.42
SHANK2-218ENST00000601538 TMEM109Q9BVC6 243 aa12.43□□□□□ -0.42
SHANK2-218ENST00000601538 ZNF224Q9NZL3 707 aa12.43□□□□□ -0.42
SHANK2-218ENST00000601538 PCYOX1Q9UHG3 505 aa12.43□□□□□ -0.42
SHANK2-218ENST00000601538 VANGL2Q9ULK5 521 aa12.43□□□□□ -0.42
SHANK2-218ENST00000601538 ERVV-1B6SEH8 477 aa12.43□□□□□ -0.42
SHANK2-218ENST00000601538 LSM8O95777 96 aaKnown RBP12.43□□□□□ -0.42
SHANK2-218ENST00000601538 DSG3P32926 999 aa12.43□□□□□ -0.42
SHANK2-218ENST00000601538 GPD2P43304 727 aa12.43□□□□□ -0.42
SHANK2-218ENST00000601538 AP1S1P61966 158 aa12.43□□□□□ -0.42
SHANK2-218ENST00000601538 HECTD3Q5T447 861 aa12.43□□□□□ -0.42
SHANK2-218ENST00000601538 ACAD10Q6JQN1 1059 aa12.43□□□□□ -0.42
SHANK2-218ENST00000601538 TRIM48Q8IWZ4 208 aa12.43□□□□□ -0.42
SHANK2-218ENST00000601538 C12orf56Q8IXR9 622 aa12.43□□□□□ -0.42
SHANK2-218ENST00000601538 B3GALNT2Q8NCR0 500 aa12.43□□□□□ -0.42
SHANK2-218ENST00000601538 AIFM3Q96NN9 605 aa12.43□□□□□ -0.42
SHANK2-218ENST00000601538 PIDD1Q9HB75 910 aa12.43□□□□□ -0.42
SHANK2-218ENST00000601538 PNMA8BQ9ULN7 279 aaPredicted RBP12.43□□□□□ -0.42
SHANK2-218ENST00000601538 A0A1W2PQ72 361 aa12.43□□□□□ -0.42
SHANK2-218ENST00000601538 G3V2T6 193 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms