RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 USP29Q9HBJ7 922 aa23.17■■□□□ 1.3
IRF3-228ENST00000601291 CLDND1Q9NY35 253 aa23.17■■□□□ 1.3
IRF3-228ENST00000601291 ZNF212Q9UDV6 495 aa23.17■■□□□ 1.3
IRF3-228ENST00000601291 SNX24Q9Y343 169 aa23.17■■□□□ 1.3
IRF3-228ENST00000601291 MTSS1O43312 755 aa23.16■■□□□ 1.3
IRF3-228ENST00000601291 RAMP2O60895 175 aa23.16■■□□□ 1.3
IRF3-228ENST00000601291 ERLIN1O75477 346 aa23.16■■□□□ 1.3
IRF3-228ENST00000601291 IGFBP4P22692 258 aa23.16■■□□□ 1.3
IRF3-228ENST00000601291 VPS41P49754 854 aa23.16■■□□□ 1.3
IRF3-228ENST00000601291 CALCOCO2Q13137 446 aa23.16■■□□□ 1.3
IRF3-228ENST00000601291 BRD3Q15059 726 aa23.16■■□□□ 1.3
IRF3-228ENST00000601291 ZNF77Q15935 545 aa23.16■■□□□ 1.3
IRF3-228ENST00000601291 P3H1Q32P28 736 aa23.16■■□□□ 1.3
IRF3-228ENST00000601291 C6orf118Q5T5N4 469 aa23.16■■□□□ 1.3
IRF3-228ENST00000601291 EP400NLQ6ZTU2 488 aa23.16■■□□□ 1.3
IRF3-228ENST00000601291 NPAS3Q8IXF0 933 aa23.16■■□□□ 1.3
IRF3-228ENST00000601291 CELF5Q8N6W0 485 aaKnown RBP23.16■■□□□ 1.3
IRF3-228ENST00000601291 EIF1ADQ8N9N8 165 aaKnown RBP23.16■■□□□ 1.3
IRF3-228ENST00000601291 TMA16Q96EY4 203 aaKnown RBP23.16■■□□□ 1.3
IRF3-228ENST00000601291 SNF8Q96H20 258 aa23.16■■□□□ 1.3
IRF3-228ENST00000601291 CLEC1BQ9P126 229 aa23.16■■□□□ 1.3
IRF3-228ENST00000601291 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.15■■□□□ 1.3
IRF3-228ENST00000601291 ARHGAP42A6NI28 874 aa23.15■■□□□ 1.3
IRF3-228ENST00000601291 NDC80O14777 642 aa23.15■■□□□ 1.3
IRF3-228ENST00000601291 RPL21P46778 160 aaKnown RBP23.15■■□□□ 1.3
IRF3-228ENST00000601291 YBEYP58557 167 aaPredicted RBP23.15■■□□□ 1.3
IRF3-228ENST00000601291 ZNF177Q13360 481 aaPredicted RBP23.15■■□□□ 1.3
IRF3-228ENST00000601291 HLTFQ14527 1009 aaKnown RBP eCLIP23.15■■□□□ 1.3
IRF3-228ENST00000601291 CTC1Q2NKJ3 1217 aa23.15■■□□□ 1.3
IRF3-228ENST00000601291 PARP15Q460N3 678 aa23.15■■□□□ 1.3
IRF3-228ENST00000601291 CCNI2Q6ZMN8 369 aaPredicted RBP23.15■■□□□ 1.3
IRF3-228ENST00000601291 TDRD5Q8NAT2 981 aaKnown RBP23.15■■□□□ 1.3
IRF3-228ENST00000601291 GLIS1Q8NBF1 620 aa23.15■■□□□ 1.3
IRF3-228ENST00000601291 BBOF1Q8ND07 529 aa23.15■■□□□ 1.3
IRF3-228ENST00000601291 LRRN4Q8WUT4 740 aa23.15■■□□□ 1.3
IRF3-228ENST00000601291 LRRC45Q96CN5 670 aa23.15■■□□□ 1.3
IRF3-228ENST00000601291 GAS2L1Q99501 681 aaPredicted RBP23.15■■□□□ 1.3
IRF3-228ENST00000601291 GDE1Q9NZC3 331 aa23.15■■□□□ 1.3
IRF3-228ENST00000601291 TBC1D14Q9P2M4 693 aa23.15■■□□□ 1.3
IRF3-228ENST00000601291 C2orf16Q68DN1 1984 aa23.15■■□□□ 1.3
IRF3-228ENST00000601291 CCDC151A5D8V7 595 aa23.14■■□□□ 1.3
IRF3-228ENST00000601291 TBX10O75333 385 aa23.14■■□□□ 1.3
IRF3-228ENST00000601291 ZSCAN5DPP0CG00 497 aa23.14■■□□□ 1.3
IRF3-228ENST00000601291 ETS1P14921 441 aa23.14■■□□□ 1.3
IRF3-228ENST00000601291 VAV1P15498 845 aa23.14■■□□□ 1.3
IRF3-228ENST00000601291 SGSHP51688 502 aa23.14■■□□□ 1.3
IRF3-228ENST00000601291 GPS1Q13098 491 aa23.14■■□□□ 1.3
IRF3-228ENST00000601291 ADGRE1Q14246 886 aa23.14■■□□□ 1.3
IRF3-228ENST00000601291 POLD3Q15054 466 aaPredicted RBP23.14■■□□□ 1.3
IRF3-228ENST00000601291 MAP9Q49MG5 647 aa23.14■■□□□ 1.3
IRF3-228ENST00000601291 TIGD7Q6NT04 549 aaPredicted RBP23.14■■□□□ 1.3
IRF3-228ENST00000601291 C4orf22Q6V702 233 aa23.14■■□□□ 1.3
IRF3-228ENST00000601291 PRUNE1Q86TP1 453 aa23.14■■□□□ 1.3
IRF3-228ENST00000601291 CCDC13Q8IYE1 715 aa23.14■■□□□ 1.3
IRF3-228ENST00000601291 FGF13Q92913 245 aa23.14■■□□□ 1.3
IRF3-228ENST00000601291 P2RY11Q96G91 374 aa23.14■■□□□ 1.3
IRF3-228ENST00000601291 RIPOR3Q96MK2 946 aa23.14■■□□□ 1.3
IRF3-228ENST00000601291 FAM129AQ9BZQ8 928 aa23.14■■□□□ 1.3
IRF3-228ENST00000601291 WHRNQ9P202 907 aa23.14■■□□□ 1.3
IRF3-228ENST00000601291 PAK5Q9P286 719 aa23.14■■□□□ 1.3
IRF3-228ENST00000601291 RASA4BC9J798 803 aa23.14■■□□□ 1.29
IRF3-228ENST00000601291 GFRA2O00451 464 aa23.14■■□□□ 1.29
IRF3-228ENST00000601291 RASA4O43374 803 aa23.14■■□□□ 1.29
IRF3-228ENST00000601291 TBL1XO60907 577 aa23.14■■□□□ 1.29
IRF3-228ENST00000601291 CYBBP04839 570 aa23.14■■□□□ 1.29
IRF3-228ENST00000601291 ITIH2P19823 946 aa23.14■■□□□ 1.29
IRF3-228ENST00000601291 CCNCP24863 283 aa23.14■■□□□ 1.29
IRF3-228ENST00000601291 CARSP49589 748 aaKnown RBP23.14■■□□□ 1.29
IRF3-228ENST00000601291 PAPOLAP51003 745 aaKnown RBP23.14■■□□□ 1.29
IRF3-228ENST00000601291 MPPE1Q53F39 396 aa23.14■■□□□ 1.29
IRF3-228ENST00000601291 SETD3Q86TU7 594 aaPredicted RBP23.14■■□□□ 1.29
IRF3-228ENST00000601291 KIAA1958Q8N8K9 716 aa23.14■■□□□ 1.29
IRF3-228ENST00000601291 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.14■■□□□ 1.297e-8■■■■■ 60.2
IRF3-228ENST00000601291 TSGA13Q96PP4 275 aa23.14■■□□□ 1.29
IRF3-228ENST00000601291 NOL6Q9H6R4 1146 aaKnown RBP23.14■■□□□ 1.29
IRF3-228ENST00000601291 SEPT10Q9P0V9 454 aa23.14■■□□□ 1.29
IRF3-228ENST00000601291 DOCK6Q96HP0 2047 aa23.14■■□□□ 1.29
IRF3-228ENST00000601291 C5orf60A6NFR6 353 aa23.13■■□□□ 1.29
IRF3-228ENST00000601291 SLC9A3R1O14745 358 aaPredicted RBP23.13■■□□□ 1.29
IRF3-228ENST00000601291 RPL22P35268 128 aaKnown RBP23.13■■□□□ 1.29
IRF3-228ENST00000601291 TRADDQ15628 312 aa23.13■■□□□ 1.29
IRF3-228ENST00000601291 MPP7Q5T2T1 576 aa23.13■■□□□ 1.29
IRF3-228ENST00000601291 ZNF354CQ86Y25 554 aa23.13■■□□□ 1.29
IRF3-228ENST00000601291 CCDC117Q8IWD4 279 aaPredicted RBP23.13■■□□□ 1.29
IRF3-228ENST00000601291 DDI1Q8WTU0 396 aa23.13■■□□□ 1.29
IRF3-228ENST00000601291 SMARCD2Q92925 531 aa23.13■■□□□ 1.29
IRF3-228ENST00000601291 OTUB2Q96DC9 234 aa23.13■■□□□ 1.29
IRF3-228ENST00000601291 PABPC5Q96DU9 382 aaKnown RBP23.13■■□□□ 1.29
IRF3-228ENST00000601291 S1PR5Q9H228 398 aa23.13■■□□□ 1.29
IRF3-228ENST00000601291 CDH22Q9UJ99 828 aa23.13■■□□□ 1.29
IRF3-228ENST00000601291 NFU1Q9UMS0 254 aa23.13■■□□□ 1.29
IRF3-228ENST00000601291 NUP210Q8TEM1 1887 aaPredicted RBP23.13■■□□□ 1.29
IRF3-228ENST00000601291 DOCK4Q8N1I0 1966 aa23.13■■□□□ 1.29
IRF3-228ENST00000601291 RNF103O00237 685 aa23.12■■□□□ 1.29
IRF3-228ENST00000601291 SOX1O00570 391 aaPredicted RBP23.12■■□□□ 1.29
IRF3-228ENST00000601291 GCATO75600 419 aa23.12■■□□□ 1.29
IRF3-228ENST00000601291 SEC31AO94979 1220 aaKnown RBP23.12■■□□□ 1.29
IRF3-228ENST00000601291 RHOCP08134 193 aa23.12■■□□□ 1.29
IRF3-228ENST00000601291 H2AFXP16104 143 aaPredicted RBP23.12■■□□□ 1.29
IRF3-228ENST00000601291 PRPF38BQ5VTL8 546 aaKnown RBP23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms