RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 PRSS16Q9NQE7 514 aa9.05□□□□□ -0.96
SSBP4-208ENST00000600628 ITM2CQ9NQX7 267 aa9.05□□□□□ -0.96
SSBP4-208ENST00000600628 SEMA4GQ9NTN9 838 aa9.05□□□□□ -0.96
SSBP4-208ENST00000600628 VANGL2Q9ULK5 521 aa9.05□□□□□ -0.96
SSBP4-208ENST00000600628 USP18Q9UMW8 372 aa9.05□□□□□ -0.96
SSBP4-208ENST00000600628 ERVW-1Q9UQF0 538 aa9.05□□□□□ -0.96
SSBP4-208ENST00000600628 HS3ST2Q9Y278 367 aa9.05□□□□□ -0.96
SSBP4-208ENST00000600628 INVSQ9Y283 1065 aa9.05□□□□□ -0.96
SSBP4-208ENST00000600628 RAD54BQ9Y620 910 aa9.05□□□□□ -0.96
SSBP4-208ENST00000600628 WDFY3Q8IZQ1 3526 aa9.05□□□□□ -0.96
SSBP4-208ENST00000600628 SPTBN2O15020 2390 aa9.05□□□□□ -0.96
SSBP4-208ENST00000600628 ASCC3Q8N3C0 2202 aaKnown RBP9.04□□□□□ -0.96
SSBP4-208ENST00000600628 ASPMQ8IZT6 3477 aa9.04□□□□□ -0.96
SSBP4-208ENST00000600628 SYNJ2BP-COX16A0A087WUM0 186 aa9.04□□□□□ -0.96
SSBP4-208ENST00000600628 A0A087X0T9 212 aa9.04□□□□□ -0.96
SSBP4-208ENST00000600628 FAM170AA1A519 330 aa9.04□□□□□ -0.96
SSBP4-208ENST00000600628 ILVBLA1L0T0 632 aa9.04□□□□□ -0.96
SSBP4-208ENST00000600628 BCLAF3A2AJT9 711 aaKnown RBP9.04□□□□□ -0.96
SSBP4-208ENST00000600628 TYW5A2RUC4 315 aaKnown RBP9.04□□□□□ -0.96
SSBP4-208ENST00000600628 PRR5-ARHGAP8B1AHC4 643 aa9.04□□□□□ -0.96
SSBP4-208ENST00000600628 GOLGA6L19H0YKK7 550 aa9.04□□□□□ -0.96
SSBP4-208ENST00000600628 CCP110O43303 1012 aa9.04□□□□□ -0.96
SSBP4-208ENST00000600628 ATP9BO43861 1147 aa9.04□□□□□ -0.96
SSBP4-208ENST00000600628 FOXD2O60548 495 aaPredicted RBP9.04□□□□□ -0.96
SSBP4-208ENST00000600628 ZNF217O75362 1048 aa9.04□□□□□ -0.96
SSBP4-208ENST00000600628 ZNF821O75541 412 aaPredicted RBP9.04□□□□□ -0.96
SSBP4-208ENST00000600628 SERPING1P05155 500 aa9.04□□□□□ -0.96
SSBP4-208ENST00000600628 PLEKP08567 350 aaPredicted RBP9.04□□□□□ -0.96
SSBP4-208ENST00000600628 ZNF806P0C7X5 589 aa9.04□□□□□ -0.96
SSBP4-208ENST00000600628 FAM228BP0C875 321 aa9.04□□□□□ -0.96
SSBP4-208ENST00000600628 POLR2EP19388 210 aaKnown RBP9.04□□□□□ -0.96
SSBP4-208ENST00000600628 TNFAIP3P21580 790 aa9.04□□□□□ -0.96
SSBP4-208ENST00000600628 GPD1P21695 349 aa9.04□□□□□ -0.96
SSBP4-208ENST00000600628 CASP14P31944 242 aa9.04□□□□□ -0.96
SSBP4-208ENST00000600628 GGCXP38435 758 aa9.04□□□□□ -0.96
SSBP4-208ENST00000600628 CTSOP43234 321 aaPredicted RBP9.04□□□□□ -0.96
SSBP4-208ENST00000600628 OXCT1P55809 520 aa9.04□□□□□ -0.96
SSBP4-208ENST00000600628 ARHGAP8P85298 464 aa9.04□□□□□ -0.96
SSBP4-208ENST00000600628 ATP11AP98196 1134 aa9.04□□□□□ -0.96
SSBP4-208ENST00000600628 ECT2LQ008S8 904 aa9.04□□□□□ -0.96
SSBP4-208ENST00000600628 KLHL30Q0D2K2 578 aa9.04□□□□□ -0.96
SSBP4-208ENST00000600628 MAPK8IP2Q13387 824 aaPredicted RBP9.04□□□□□ -0.96
SSBP4-208ENST00000600628 CDH18Q13634 790 aa9.04□□□□□ -0.96
SSBP4-208ENST00000600628 ELF2Q15723 593 aa9.04□□□□□ -0.96
SSBP4-208ENST00000600628 ZNF783Q6ZMS7 281 aa9.04□□□□□ -0.96
SSBP4-208ENST00000600628 SND1Q7KZF4 910 aaKnown RBP eCLIP9.04□□□□□ -0.96
SSBP4-208ENST00000600628 DNAAF5Q86Y56 855 aa9.04□□□□□ -0.96
SSBP4-208ENST00000600628 TMPRSS6Q8IU80 811 aa9.04□□□□□ -0.96
SSBP4-208ENST00000600628 PGBD3Q8N328 593 aa9.04□□□□□ -0.96
SSBP4-208ENST00000600628 CARNMT1Q8N4J0 409 aa9.04□□□□□ -0.96
SSBP4-208ENST00000600628 CCDC185Q8N715 623 aa9.04□□□□□ -0.96
SSBP4-208ENST00000600628 C1orf216Q8TAB5 229 aa9.04□□□□□ -0.96
SSBP4-208ENST00000600628 FAM172AQ8WUF8 416 aa9.04□□□□□ -0.96
SSBP4-208ENST00000600628 CYB5D2Q8WUJ1 264 aa9.04□□□□□ -0.96
SSBP4-208ENST00000600628 HMGB4Q8WW32 186 aa9.04□□□□□ -0.96
SSBP4-208ENST00000600628 RLN3Q8WXF3 142 aa9.04□□□□□ -0.96
SSBP4-208ENST00000600628 PTPRN2Q92932 1015 aa9.04□□□□□ -0.96
SSBP4-208ENST00000600628 ZNF419Q96HQ0 510 aaPredicted RBP9.04□□□□□ -0.96
SSBP4-208ENST00000600628 MCEEQ96PE7 176 aa9.04□□□□□ -0.96
SSBP4-208ENST00000600628 ACE2Q9BYF1 805 aaPredicted RBP9.04□□□□□ -0.96
SSBP4-208ENST00000600628 TRIM7Q9C029 511 aa9.04□□□□□ -0.96
SSBP4-208ENST00000600628 CIPCQ9C0C6 399 aa9.04□□□□□ -0.96
SSBP4-208ENST00000600628 SLC6A17Q9H1V8 727 aa9.04□□□□□ -0.96
SSBP4-208ENST00000600628 RSPH9Q9H1X1 276 aaPredicted RBP9.04□□□□□ -0.96
SSBP4-208ENST00000600628 ARRDC1-AS1Q9H2J1 176 aa9.04□□□□□ -0.96
SSBP4-208ENST00000600628 NOL6Q9H6R4 1146 aaKnown RBP9.04□□□□□ -0.96
SSBP4-208ENST00000600628 CD93Q9NPY3 652 aa9.04□□□□□ -0.96
SSBP4-208ENST00000600628 PARVAQ9NVD7 372 aa9.04□□□□□ -0.96
SSBP4-208ENST00000600628 DLL3Q9NYJ7 618 aa9.04□□□□□ -0.96
SSBP4-208ENST00000600628 WSB2Q9NYS7 404 aaPredicted RBP9.04□□□□□ -0.96
SSBP4-208ENST00000600628 COX16Q9P0S2 106 aa9.04□□□□□ -0.96
SSBP4-208ENST00000600628 STIM2Q9P246 746 aa9.04□□□□□ -0.96
SSBP4-208ENST00000600628 BCCIPQ9P287 314 aaKnown RBP eCLIP9.04□□□□□ -0.96
SSBP4-208ENST00000600628 OR12D3Q9UGF7 316 aa9.04□□□□□ -0.96
SSBP4-208ENST00000600628 ADAMTS1Q9UHI8 967 aa9.04□□□□□ -0.96
SSBP4-208ENST00000600628 SLCO3A1Q9UIG8 710 aa9.04□□□□□ -0.96
SSBP4-208ENST00000600628 LUC7L2Q9Y383 392 aaKnown RBP9.04□□□□□ -0.96
SSBP4-208ENST00000600628 SNX10Q9Y5X0 201 aa9.04□□□□□ -0.96
SSBP4-208ENST00000600628 DOCK9Q9BZ29 2069 aa9.04□□□□□ -0.96
SSBP4-208ENST00000600628 PCNX2A6NKB5 2137 aa9.04□□□□□ -0.96
SSBP4-208ENST00000600628 CABIN1Q9Y6J0 2220 aa9.03□□□□□ -0.96
SSBP4-208ENST00000600628 TARSL2A2RTX5 802 aaKnown RBP9.03□□□□□ -0.96
SSBP4-208ENST00000600628 WASH4PA8MWX3 477 aa9.03□□□□□ -0.96
SSBP4-208ENST00000600628 H0Y626 953 aa9.03□□□□□ -0.96
SSBP4-208ENST00000600628 TM4SF5O14894 197 aa9.03□□□□□ -0.96
SSBP4-208ENST00000600628 ZBTB24O43167 697 aaPredicted RBP9.03□□□□□ -0.96
SSBP4-208ENST00000600628 LRIG2O94898 1065 aa9.03□□□□□ -0.96
SSBP4-208ENST00000600628 CD160O95971 181 aa9.03□□□□□ -0.96
SSBP4-208ENST00000600628 CYP1A2P05177 515 aa9.03□□□□□ -0.96
SSBP4-208ENST00000600628 MYBL1P10243 752 aa9.03□□□□□ -0.96
SSBP4-208ENST00000600628 HLA-EP13747 358 aa9.03□□□□□ -0.96
SSBP4-208ENST00000600628 SDHBP21912 280 aa9.03□□□□□ -0.96
SSBP4-208ENST00000600628 L1CAMP32004 1257 aa9.03□□□□□ -0.96
SSBP4-208ENST00000600628 HOXD12P35452 270 aa9.03□□□□□ -0.96
SSBP4-208ENST00000600628 TPMTP51580 245 aa9.03□□□□□ -0.96
SSBP4-208ENST00000600628 ZBTB16Q05516 673 aa9.03□□□□□ -0.96
SSBP4-208ENST00000600628 SULT2A1Q06520 285 aa9.03□□□□□ -0.96
SSBP4-208ENST00000600628 BYSLQ13895 437 aaKnown RBP9.03□□□□□ -0.96
SSBP4-208ENST00000600628 PUM1Q14671 1186 aaKnown RBP eCLIP9.03□□□□□ -0.96
SSBP4-208ENST00000600628 STARD3Q14849 445 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms