RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 C2CD2LO14523 706 aa11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 DGKIO75912 1065 aa11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 CSPG5O95196 566 aa11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 TPSB2P20231 275 aa11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 GPR15P49685 360 aa11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 FKBP1BP68106 108 aa11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 TSPY1Q01534 308 aa11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 PDE1CQ14123 709 aaPredicted RBP11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 TPSAB1Q15661 275 aa11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 PARP6Q2NL67 630 aa11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 NOMO2Q5JPE7 1267 aa11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 CES4AQ5XG92 561 aa11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 C10orf107Q8IVU9 208 aa11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 EFCAB3Q8N7B9 438 aa11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 SMC1BQ8NDV3 1235 aa11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 MCUQ8NE86 351 aa11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 OR10T2Q8NGX3 314 aa11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 PABPC5Q96DU9 382 aaKnown RBP11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 CERS2Q96G23 380 aa11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 C11orf84Q9BUA3 381 aaPredicted RBP11.8□□□□□ -0.52
ARHGEF1-220ENST00000600274 TRDMT1O14717 391 aaKnown RBP11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 GPR182O15218 404 aa11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 ALDOAP04075 364 aaKnown RBP11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 PRKCHP24723 683 aa11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 GRK4P32298 578 aa11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 ETFBP38117 255 aa11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 MAXP61244 160 aa11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 IRF9Q00978 393 aa11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 SLC18A2Q05940 514 aa11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 PEX6Q13608 980 aa11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 PRKD1Q15139 912 aaPredicted RBP11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 RGMBQ6NW40 437 aa11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 DCLK2Q8N568 766 aa11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 SPDYE1Q8NFV5 336 aaPredicted RBP11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 DQX1Q8TE96 717 aaKnown RBP11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 CCDC124Q96CT7 223 aaKnown RBP11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 RTP4Q96DX8 246 aa11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 FRMD8Q9BZ67 464 aaPredicted RBP11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 TMEM216Q9P0N5 145 aa11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 PCDH10Q9P2E7 1040 aa11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 DICER1Q9UPY3 1922 aaKnown RBP11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 GOLGA8QA0A0J9YX86 632 aa11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 GOLGA8OA6NCC3 632 aa11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 MANSC4A6NHS7 340 aaPredicted RBP11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 FAM159BA6NKW6 160 aa11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 C9IYK1 514 aa11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 GOLGA8NF8WBI6 632 aa11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 SCAMP3O14828 347 aaKnown RBP11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 DUSP11O75319 330 aaKnown RBP11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 ZMPSTE24O75844 475 aa11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 PGAM1P18669 254 aa11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 GJA9P57773 515 aa11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 CDK16Q00536 496 aa11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 ZNF460Q14592 562 aa11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 PPP4R1Q8TF05 950 aa11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 SLC7A6OSQ96CW6 309 aaPredicted RBP11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 OLFM3Q96PB7 478 aa11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 WDR6Q9NNW5 1121 aaKnown RBP11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 PNPOQ9NVS9 261 aa11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 USP3Q9Y6I4 520 aa11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 EME2A4GXA9 379 aaPredicted RBP11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 NT5C1B-RDH14C9J2C7 533 aa11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 CCL22O00626 93 aa11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 TBX18O95935 607 aa11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 PRKAR2AP13861 404 aaKnown RBP11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 USP4Q13107 963 aa11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 C17orf99Q6UX52 265 aa11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 ISLR2Q6UXK2 745 aa11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 ZNF276Q8N554 614 aa11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 ATPAF2Q8N5M1 289 aa11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 ACVR1CQ8NER5 493 aa11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 FBXO27Q8NI29 283 aa11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 STMN2Q93045 179 aa11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 LRRC39Q96DD0 335 aa11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 NSL1Q96IY1 281 aa11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 CNGB3Q9NQW8 809 aa11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 NDFIP2Q9NV92 336 aa11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 FBXW11Q9UKB1 542 aa11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 PACSIN3Q9UKS6 424 aa11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.79□□□□□ -0.52
ARHGEF1-220ENST00000600274 CCND1P24385 295 aa11.78□□□□□ -0.52
ARHGEF1-220ENST00000600274 LRPAP1P30533 357 aa11.78□□□□□ -0.52
ARHGEF1-220ENST00000600274 CTBP1Q13363 440 aa11.78□□□□□ -0.52
ARHGEF1-220ENST00000600274 LRRC36Q1X8D7 754 aa11.78□□□□□ -0.52
ARHGEF1-220ENST00000600274 LRRC8BQ6P9F7 803 aa11.78□□□□□ -0.52
ARHGEF1-220ENST00000600274 RINLQ6ZS11 566 aa11.78□□□□□ -0.52
ARHGEF1-220ENST00000600274 ZNF280BQ86YH2 543 aa11.78□□□□□ -0.52
ARHGEF1-220ENST00000600274 PSTKQ8IV42 348 aaKnown RBP11.78□□□□□ -0.52
ARHGEF1-220ENST00000600274 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.78□□□□□ -0.52
ARHGEF1-220ENST00000600274 CFAP61Q8NHU2 1237 aa11.78□□□□□ -0.52
ARHGEF1-220ENST00000600274 ARNTL2Q8WYA1 636 aa11.78□□□□□ -0.52
ARHGEF1-220ENST00000600274 THTPAQ9BU02 230 aa11.78□□□□□ -0.52
ARHGEF1-220ENST00000600274 FSD1LQ9BXM9 530 aa11.78□□□□□ -0.52
ARHGEF1-220ENST00000600274 DMAP1Q9NPF5 467 aaPredicted RBP11.78□□□□□ -0.52
ARHGEF1-220ENST00000600274 CDH9Q9ULB4 789 aa11.78□□□□□ -0.52
ARHGEF1-220ENST00000600274 MTO1Q9Y2Z2 717 aaKnown RBP11.78□□□□□ -0.52
ARHGEF1-220ENST00000600274 HACD1B0YJ81 288 aa11.78□□□□□ -0.52
ARHGEF1-220ENST00000600274 BUD23O43709 281 aaKnown RBP11.78□□□□□ -0.52
ARHGEF1-220ENST00000600274 DLDP09622 509 aaKnown RBP11.78□□□□□ -0.52
ARHGEF1-220ENST00000600274 NMBRP28336 390 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms