RNA–Protein interactions for RNA: ENST00000599342.5

VRK3-216, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-216ENST00000599342 SLC26A9Q7LBE3 791 aa10.1□□□□□ -0.79
VRK3-216ENST00000599342 RAB44Q7Z6P3 723 aaPredicted RBP10.1□□□□□ -0.79
VRK3-216ENST00000599342 DSG4Q86SJ6 1040 aa10.1□□□□□ -0.79
VRK3-216ENST00000599342 GLRX5Q86SX6 157 aa10.1□□□□□ -0.79
VRK3-216ENST00000599342 SLC47A2Q86VL8 602 aa10.1□□□□□ -0.79
VRK3-216ENST00000599342 IRF2BP1Q8IU81 584 aa10.1□□□□□ -0.79
VRK3-216ENST00000599342 STK40Q8N2I9 435 aa10.1□□□□□ -0.79
VRK3-216ENST00000599342 WDTC1Q8N5D0 677 aa10.1□□□□□ -0.79
VRK3-216ENST00000599342 OR2T34Q8NGX1 318 aa10.1□□□□□ -0.79
VRK3-216ENST00000599342 RHBDD1Q8TEB9 315 aa10.1□□□□□ -0.79
VRK3-216ENST00000599342 ADAMTS14Q8WXS8 1223 aa10.1□□□□□ -0.79
VRK3-216ENST00000599342 PTPRN2Q92932 1015 aa10.1□□□□□ -0.79
VRK3-216ENST00000599342 IGSF8Q969P0 613 aa10.1□□□□□ -0.79
VRK3-216ENST00000599342 SPAG5Q96R06 1193 aa10.1□□□□□ -0.79
VRK3-216ENST00000599342 CDC6Q99741 560 aa10.1□□□□□ -0.79
VRK3-216ENST00000599342 PRMT1Q99873 361 aaKnown RBP10.1□□□□□ -0.79
VRK3-216ENST00000599342 TUBGCP2Q9BSJ2 902 aa10.1□□□□□ -0.79
VRK3-216ENST00000599342 NUP62CLQ9H1M0 184 aa10.1□□□□□ -0.79
VRK3-216ENST00000599342 NEUROG2Q9H2A3 272 aa10.1□□□□□ -0.79
VRK3-216ENST00000599342 NDST4Q9H3R1 872 aa10.1□□□□□ -0.79
VRK3-216ENST00000599342 CLSTN2Q9H4D0 955 aa10.1□□□□□ -0.79
VRK3-216ENST00000599342 SIX2Q9NPC8 291 aa10.1□□□□□ -0.79
VRK3-216ENST00000599342 PLCB1Q9NQ66 1216 aa10.1□□□□□ -0.79
VRK3-216ENST00000599342 RRN3Q9NYV6 651 aa10.1□□□□□ -0.79
VRK3-216ENST00000599342 SERGEFQ9UGK8 458 aa10.1□□□□□ -0.79
VRK3-216ENST00000599342 SLCO3A1Q9UIG8 710 aa10.1□□□□□ -0.79
VRK3-216ENST00000599342 AJAP1Q9UKB5 411 aaPredicted RBP10.1□□□□□ -0.79
VRK3-216ENST00000599342 VANGL2Q9ULK5 521 aa10.1□□□□□ -0.79
VRK3-216ENST00000599342 TPX2Q9ULW0 747 aaKnown RBP10.1□□□□□ -0.79
VRK3-216ENST00000599342 SLCO1B1Q9Y6L6 691 aa10.1□□□□□ -0.79
VRK3-216ENST00000599342 ACACBO00763 2458 aa10.1□□□□□ -0.79
VRK3-216ENST00000599342 TPRP12270 2363 aaKnown RBP10.09□□□□□ -0.79
VRK3-216ENST00000599342 A0A1W2PPC4 97 aa10.09□□□□□ -0.79
VRK3-216ENST00000599342 FOXN3O00409 490 aaPredicted RBP10.09□□□□□ -0.79
VRK3-216ENST00000599342 CBFA2T3O75081 653 aa10.09□□□□□ -0.79
VRK3-216ENST00000599342 IGHV4-34P06331 123 aa10.09□□□□□ -0.79
VRK3-216ENST00000599342 PNMA6AP0CW24 399 aaPredicted RBP10.09□□□□□ -0.79
VRK3-216ENST00000599342 GOT1P17174 413 aa10.09□□□□□ -0.79
VRK3-216ENST00000599342 ERCC5P28715 1186 aaPredicted RBP10.09□□□□□ -0.79
VRK3-216ENST00000599342 CLCN1P35523 988 aa10.09□□□□□ -0.79
VRK3-216ENST00000599342 GRK6P43250 576 aa10.09□□□□□ -0.79
VRK3-216ENST00000599342 SULT1E1P49888 294 aa10.09□□□□□ -0.79
VRK3-216ENST00000599342 ADPRHP54922 357 aa10.09□□□□□ -0.79
VRK3-216ENST00000599342 ACCSLQ4AC99 568 aa10.09□□□□□ -0.79
VRK3-216ENST00000599342 CXorf57Q6NSI4 855 aaKnown RBP10.09□□□□□ -0.79
VRK3-216ENST00000599342 FBXL22Q6P050 247 aa10.09□□□□□ -0.79
VRK3-216ENST00000599342 PNPLA1Q8N8W4 532 aa10.09□□□□□ -0.79
VRK3-216ENST00000599342 TMEM35BQ8NCS4 154 aa10.09□□□□□ -0.79
VRK3-216ENST00000599342 MSANTD4Q8NCY6 345 aa10.09□□□□□ -0.79
VRK3-216ENST00000599342 ZNF397Q8NF99 534 aaPredicted RBP10.09□□□□□ -0.79
VRK3-216ENST00000599342 OR14C36Q8NHC7 312 aa10.09□□□□□ -0.79
VRK3-216ENST00000599342 OR8D1Q8WZ84 308 aa10.09□□□□□ -0.79
VRK3-216ENST00000599342 SLC6A18Q96N87 628 aa10.09□□□□□ -0.79
VRK3-216ENST00000599342 MUC3BQ9H195 1237 aa10.09□□□□□ -0.79
VRK3-216ENST00000599342 WDCPQ9H6R7 721 aa10.09□□□□□ -0.79
VRK3-216ENST00000599342 AASDHPPTQ9NRN7 309 aa10.09□□□□□ -0.79
VRK3-216ENST00000599342 ADAMTS1Q9UHI8 967 aa10.09□□□□□ -0.79
VRK3-216ENST00000599342 VPS28Q9UK41 221 aa10.09□□□□□ -0.79
VRK3-216ENST00000599342 PAXBP1Q9Y5B6 917 aa10.09□□□□□ -0.79
VRK3-216ENST00000599342 HS3ST4Q9Y661 456 aa10.09□□□□□ -0.79
VRK3-216ENST00000599342 GOLGA8CPA6NN73 597 aa10.08□□□□□ -0.8
VRK3-216ENST00000599342 C1QTNF3-AMACRE9PGA6 284 aa10.08□□□□□ -0.8
VRK3-216ENST00000599342 VILLO15195 856 aa10.08□□□□□ -0.8
VRK3-216ENST00000599342 DFNA5O60443 496 aa10.08□□□□□ -0.8
VRK3-216ENST00000599342 PAGE1O75459 146 aa10.08□□□□□ -0.8
VRK3-216ENST00000599342 CLDN11O75508 207 aa10.08□□□□□ -0.8
VRK3-216ENST00000599342 CYP11B1P15538 503 aa10.08□□□□□ -0.8
VRK3-216ENST00000599342 ZNF18P17022 549 aa10.08□□□□□ -0.8
VRK3-216ENST00000599342 GGCXP38435 758 aa10.08□□□□□ -0.8
VRK3-216ENST00000599342 PLK1P53350 603 aa10.08□□□□□ -0.8
VRK3-216ENST00000599342 CDH4P55283 916 aa10.08□□□□□ -0.8
VRK3-216ENST00000599342 RNASE9P60153 205 aaKnown RBP10.08□□□□□ -0.8
VRK3-216ENST00000599342 KRT83P78385 493 aa10.08□□□□□ -0.8
VRK3-216ENST00000599342 IL9RQ01113 521 aa10.08□□□□□ -0.8
VRK3-216ENST00000599342 KCNJ12Q14500 433 aa10.08□□□□□ -0.8
VRK3-216ENST00000599342 DRAP1Q14919 205 aaPredicted RBP10.08□□□□□ -0.8
VRK3-216ENST00000599342 SLC45A4Q5BKX6 768 aa10.08□□□□□ -0.8
VRK3-216ENST00000599342 MIIPQ5JXC2 388 aa10.08□□□□□ -0.8
VRK3-216ENST00000599342 BRMS1LQ5PSV4 323 aa10.08□□□□□ -0.8
VRK3-216ENST00000599342 FAM102AQ5T9C2 384 aaPredicted RBP10.08□□□□□ -0.8
VRK3-216ENST00000599342 TAF3Q5VWG9 929 aa10.08□□□□□ -0.8
VRK3-216ENST00000599342 FAM46CQ5VWP2 391 aa10.08□□□□□ -0.8
VRK3-216ENST00000599342 DBX2Q6ZNG2 339 aa10.08□□□□□ -0.8
VRK3-216ENST00000599342 FAM71AQ8IYT1 594 aa10.08□□□□□ -0.8
VRK3-216ENST00000599342 AADATQ8N5Z0 425 aa10.08□□□□□ -0.8
VRK3-216ENST00000599342 BAHD1Q8TBE0 780 aaPredicted RBP10.08□□□□□ -0.8
VRK3-216ENST00000599342 CCDC114Q96M63 670 aa10.08□□□□□ -0.8
VRK3-216ENST00000599342 FAM129BQ96TA1 746 aa10.08□□□□□ -0.8
VRK3-216ENST00000599342 ORAI3Q9BRQ5 295 aa10.08□□□□□ -0.8
VRK3-216ENST00000599342 TKTL2Q9H0I9 626 aa10.08□□□□□ -0.8
VRK3-216ENST00000599342 SIK2Q9H0K1 926 aa10.08□□□□□ -0.8
VRK3-216ENST00000599342 TMEM51Q9NW97 253 aa10.08□□□□□ -0.8
VRK3-216ENST00000599342 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.08□□□□□ -0.8
VRK3-216ENST00000599342 FHOD1Q9Y613 1164 aa10.08□□□□□ -0.8
VRK3-216ENST00000599342 CACNA1BQ00975 2339 aa10.08□□□□□ -0.8
VRK3-216ENST00000599342 TBC1D3DA0A087WVF3 549 aa10.07□□□□□ -0.8
VRK3-216ENST00000599342 TBC1D3IA0A087WXS9 549 aa10.07□□□□□ -0.8
VRK3-216ENST00000599342 TBC1D3EA0A087X179 549 aa10.07□□□□□ -0.8
VRK3-216ENST00000599342 TBC1D3KA0A087X1G2 549 aa10.07□□□□□ -0.8
VRK3-216ENST00000599342 FAM221BA6H8Z2 402 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms