RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 CFIP05156 583 aa14.55□□□□□ -0.08
LIG1-218ENST00000599322 ADRB1P08588 477 aa14.55□□□□□ -0.08
LIG1-218ENST00000599322 PTGER3P43115 390 aa14.55□□□□□ -0.08
LIG1-218ENST00000599322 PTPN9P43378 593 aa14.55□□□□□ -0.08
LIG1-218ENST00000599322 PLK1P53350 603 aa14.55□□□□□ -0.08
LIG1-218ENST00000599322 LIMK1P53667 647 aa14.55□□□□□ -0.08
LIG1-218ENST00000599322 FANCCQ00597 558 aa14.55□□□□□ -0.08
LIG1-218ENST00000599322 GFPT1Q06210 699 aaPredicted RBP14.55□□□□□ -0.08
LIG1-218ENST00000599322 KLHL30Q0D2K2 578 aa14.55□□□□□ -0.08
LIG1-218ENST00000599322 PTPRNQ16849 979 aa14.55□□□□□ -0.08
LIG1-218ENST00000599322 ZSCAN23Q3MJ62 389 aa14.55□□□□□ -0.08
LIG1-218ENST00000599322 TRIM61Q5EBN2 209 aa14.55□□□□□ -0.08
LIG1-218ENST00000599322 STRADAQ7RTN6 431 aa14.55□□□□□ -0.08
LIG1-218ENST00000599322 SETD3Q86TU7 594 aaPredicted RBP14.55□□□□□ -0.08
LIG1-218ENST00000599322 LUZP1Q86V48 1076 aa14.55□□□□□ -0.08
LIG1-218ENST00000599322 CIR1Q86X95 450 aaPredicted RBP14.55□□□□□ -0.08
LIG1-218ENST00000599322 FAM131BQ86XD5 332 aa14.55□□□□□ -0.08
LIG1-218ENST00000599322 CACUL1Q86Y37 369 aa14.55□□□□□ -0.08
LIG1-218ENST00000599322 FRMD1Q8N878 549 aa14.55□□□□□ -0.08
LIG1-218ENST00000599322 ZNF366Q8N895 744 aa14.55□□□□□ -0.08
LIG1-218ENST00000599322 C3orf20Q8ND61 904 aa14.55□□□□□ -0.08
LIG1-218ENST00000599322 CADM4Q8NFZ8 388 aa14.55□□□□□ -0.08
LIG1-218ENST00000599322 IGSF8Q969P0 613 aa14.55□□□□□ -0.08
LIG1-218ENST00000599322 VCPIP1Q96JH7 1222 aa14.55□□□□□ -0.08
LIG1-218ENST00000599322 HSPA12BQ96MM6 686 aa14.55□□□□□ -0.08
LIG1-218ENST00000599322 EDEM2Q9BV94 578 aa14.55□□□□□ -0.08
LIG1-218ENST00000599322 GPR174Q9BXC1 333 aa14.55□□□□□ -0.08
LIG1-218ENST00000599322 BTBD1Q9H0C5 482 aa14.55□□□□□ -0.08
LIG1-218ENST00000599322 PCED1AQ9H1Q7 454 aa14.55□□□□□ -0.08
LIG1-218ENST00000599322 CD248Q9HCU0 757 aa14.55□□□□□ -0.08
LIG1-218ENST00000599322 PRSS16Q9NQE7 514 aa14.55□□□□□ -0.08
LIG1-218ENST00000599322 WSB2Q9NYS7 404 aaPredicted RBP14.55□□□□□ -0.08
LIG1-218ENST00000599322 USP36Q9P275 1121 aaKnown RBP14.55□□□□□ -0.08
LIG1-218ENST00000599322 EVLQ9UI08 416 aaPredicted RBP14.55□□□□□ -0.08
LIG1-218ENST00000599322 ABCA7Q8IZY2 2146 aa14.54□□□□□ -0.08
LIG1-218ENST00000599322 ACACBO00763 2458 aa14.54□□□□□ -0.08
LIG1-218ENST00000599322 MAP1BP46821 2468 aaKnown RBP14.54□□□□□ -0.08
LIG1-218ENST00000599322 SIGLEC16A6NMB1 481 aa14.54□□□□□ -0.08
LIG1-218ENST00000599322 E9PAM4 449 aa14.54□□□□□ -0.08
LIG1-218ENST00000599322 ENDOD1O94919 500 aa14.54□□□□□ -0.08
LIG1-218ENST00000599322 SYPP08247 313 aa14.54□□□□□ -0.08
LIG1-218ENST00000599322 OR1E1P30953 314 aa14.54□□□□□ -0.08
LIG1-218ENST00000599322 ETFBP38117 255 aa14.54□□□□□ -0.08
LIG1-218ENST00000599322 COPAP53621 1224 aa14.54□□□□□ -0.08
LIG1-218ENST00000599322 NR1I3Q14994 352 aa14.54□□□□□ -0.08
LIG1-218ENST00000599322 PPM1JQ5JR12 505 aa14.54□□□□□ -0.08
LIG1-218ENST00000599322 STPG1Q5TH74 334 aa14.54□□□□□ -0.08
LIG1-218ENST00000599322 IRF2BP2Q7Z5L9 587 aa14.54□□□□□ -0.08
LIG1-218ENST00000599322 FAM124AQ86V42 546 aa14.54□□□□□ -0.08
LIG1-218ENST00000599322 APCDD1Q8J025 514 aa14.54□□□□□ -0.08
LIG1-218ENST00000599322 MYEOVQ96EZ4 313 aa14.54□□□□□ -0.08
LIG1-218ENST00000599322 TRIM11Q96F44 468 aa14.54□□□□□ -0.08
LIG1-218ENST00000599322 ZNF419Q96HQ0 510 aaPredicted RBP14.54□□□□□ -0.08
LIG1-218ENST00000599322 LMLNQ96KR4 655 aa14.54□□□□□ -0.08
LIG1-218ENST00000599322 PCDHB18PQ96TA0 734 aa14.54□□□□□ -0.08
LIG1-218ENST00000599322 OMDQ99983 421 aa14.54□□□□□ -0.08
LIG1-218ENST00000599322 ZYG11BQ9C0D3 744 aa14.54□□□□□ -0.08
LIG1-218ENST00000599322 RETREG1Q9H6L5 497 aa14.54□□□□□ -0.08
LIG1-218ENST00000599322 TMEM9BQ9NQ34 198 aa14.54□□□□□ -0.08
LIG1-218ENST00000599322 PARVAQ9NVD7 372 aa14.54□□□□□ -0.08
LIG1-218ENST00000599322 INTS6Q9UL03 887 aaKnown RBP14.54□□□□□ -0.08
LIG1-218ENST00000599322 SLC6A14Q9UN76 642 aa14.54□□□□□ -0.08
LIG1-218ENST00000599322 BZW2Q9Y6E2 419 aaKnown RBP14.54□□□□□ -0.08
LIG1-218ENST00000599322 CNOT1A5YKK6 2376 aaKnown RBP14.54□□□□□ -0.08
LIG1-218ENST00000599322 EPG5Q9HCE0 2579 aa14.53□□□□□ -0.08
LIG1-218ENST00000599322 CEP192Q8TEP8 1941 aa14.53□□□□□ -0.08
LIG1-218ENST00000599322 TNRC6BQ9UPQ9 1833 aaKnown RBP14.53□□□□□ -0.08
LIG1-218ENST00000599322 C2CD4BA6NLJ0 364 aa14.53□□□□□ -0.08
LIG1-218ENST00000599322 DRGXA6NNA5 263 aa14.53□□□□□ -0.08
LIG1-218ENST00000599322 CBFA2T2O43439 604 aa14.53□□□□□ -0.08
LIG1-218ENST00000599322 SIN3BO75182 1162 aa14.53□□□□□ -0.08
LIG1-218ENST00000599322 TFE3P19532 575 aaPredicted RBP14.53□□□□□ -0.08
LIG1-218ENST00000599322 ITPKAP23677 461 aa14.53□□□□□ -0.08
LIG1-218ENST00000599322 MZF1P28698 734 aaPredicted RBP14.53□□□□□ -0.08
LIG1-218ENST00000599322 ADRA1BP35368 520 aa14.53□□□□□ -0.08
LIG1-218ENST00000599322 GGCXP38435 758 aa14.53□□□□□ -0.08
LIG1-218ENST00000599322 RECQLP46063 649 aaPredicted RBP14.53□□□□□ -0.08
LIG1-218ENST00000599322 GSCP56915 257 aaPredicted RBP14.53□□□□□ -0.08
LIG1-218ENST00000599322 RPS14P62263 151 aaKnown RBP14.53□□□□□ -0.08
LIG1-218ENST00000599322 CCDC15Q0P6D6 951 aa14.53□□□□□ -0.08
LIG1-218ENST00000599322 ARID5BQ14865 1188 aa14.53□□□□□ -0.08
LIG1-218ENST00000599322 CCDC14Q49A88 953 aa14.53□□□□□ -0.08
LIG1-218ENST00000599322 C5orf22Q49AR2 442 aa14.53□□□□□ -0.08
LIG1-218ENST00000599322 TDRD12Q587J7 1177 aaKnown RBP14.53□□□□□ -0.08
LIG1-218ENST00000599322 FIGNQ5HY92 759 aa14.53□□□□□ -0.08
LIG1-218ENST00000599322 EFHC2Q5JST6 749 aa14.53□□□□□ -0.08
LIG1-218ENST00000599322 FAM46CQ5VWP2 391 aa14.53□□□□□ -0.08
LIG1-218ENST00000599322 RWDD4Q6NW29 188 aaKnown RBP14.53□□□□□ -0.08
LIG1-218ENST00000599322 SCYL2Q6P3W7 929 aa14.53□□□□□ -0.08
LIG1-218ENST00000599322 ZNF783Q6ZMS7 281 aa14.53□□□□□ -0.08
LIG1-218ENST00000599322 C14orf80Q86SX3 495 aa14.53□□□□□ -0.08
LIG1-218ENST00000599322 FAM172AQ8WUF8 416 aa14.53□□□□□ -0.08
LIG1-218ENST00000599322 OR8D1Q8WZ84 308 aa14.53□□□□□ -0.08
LIG1-218ENST00000599322 RPL10LQ96L21 214 aaKnown RBP14.53□□□□□ -0.08
LIG1-218ENST00000599322 NAP1L5Q96NT1 182 aaPredicted RBP14.53□□□□□ -0.08
LIG1-218ENST00000599322 FEM1AQ9BSK4 669 aa14.53□□□□□ -0.08
LIG1-218ENST00000599322 SPON2Q9BUD6 331 aa14.53□□□□□ -0.08
LIG1-218ENST00000599322 MIR1-1HGQ9H1L0 117 aa14.53□□□□□ -0.08
LIG1-218ENST00000599322 RSPH9Q9H1X1 276 aaPredicted RBP14.53□□□□□ -0.08
LIG1-218ENST00000599322 SMOC1Q9H4F8 434 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms