RNA–Protein interactions for RNA: ENST00000599044.1

CCDC61-207, Transcript of coiled-coil domain containing 61, humanhuman

TSL 2

Gene CCDC61, Length 849 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-207ENST00000599044 KNL1Q8NG31 2342 aa23.6■■□□□ 1.37
CCDC61-207ENST00000599044 TARSL2A2RTX5 802 aaKnown RBP23.6■■□□□ 1.37
CCDC61-207ENST00000599044 FAM47DPA6NHR8 397 aa23.6■■□□□ 1.37
CCDC61-207ENST00000599044 M0QYT0 321 aa23.6■■□□□ 1.37
CCDC61-207ENST00000599044 CBFA2T3O75081 653 aa23.6■■□□□ 1.37
CCDC61-207ENST00000599044 SLC2A3P11169 496 aa23.6■■□□□ 1.37
CCDC61-207ENST00000599044 CYP11B1P15538 503 aa23.6■■□□□ 1.37
CCDC61-207ENST00000599044 SLC8A1P32418 973 aa23.6■■□□□ 1.37
CCDC61-207ENST00000599044 NOS2P35228 1153 aa23.6■■□□□ 1.37
CCDC61-207ENST00000599044 MATKP42679 507 aa23.6■■□□□ 1.37
CCDC61-207ENST00000599044 AFF3P51826 1226 aaKnown RBP23.6■■□□□ 1.37
CCDC61-207ENST00000599044 GALCP54803 685 aa23.6■■□□□ 1.37
CCDC61-207ENST00000599044 RNASE9P60153 205 aaKnown RBP23.6■■□□□ 1.37
CCDC61-207ENST00000599044 C2CD6Q53TS8 623 aa23.6■■□□□ 1.37
CCDC61-207ENST00000599044 TAF3Q5VWG9 929 aa23.6■■□□□ 1.37
CCDC61-207ENST00000599044 USP30Q70CQ3 517 aa23.6■■□□□ 1.37
CCDC61-207ENST00000599044 CHCHD4Q8N4Q1 142 aa23.6■■□□□ 1.37
CCDC61-207ENST00000599044 AADATQ8N5Z0 425 aa23.6■■□□□ 1.37
CCDC61-207ENST00000599044 ZNF397Q8NF99 534 aaPredicted RBP23.6■■□□□ 1.37
CCDC61-207ENST00000599044 GATA6Q92908 595 aa23.6■■□□□ 1.37
CCDC61-207ENST00000599044 RPRD1AQ96P16 312 aaPredicted RBP23.6■■□□□ 1.37
CCDC61-207ENST00000599044 SYNCQ9H7C4 482 aa23.6■■□□□ 1.37
CCDC61-207ENST00000599044 TMEM63CQ9P1W3 806 aa23.6■■□□□ 1.37
CCDC61-207ENST00000599044 NCKAP1Q9Y2A7 1128 aa23.6■■□□□ 1.37
CCDC61-207ENST00000599044 SNX10Q9Y5X0 201 aa23.6■■□□□ 1.37
CCDC61-207ENST00000599044 EDDM13A0A1B0GTR0 161 aa23.59■■□□□ 1.37
CCDC61-207ENST00000599044 A0A1B0GVM2 712 aa23.59■■□□□ 1.37
CCDC61-207ENST00000599044 TCAF2A6NFQ2 919 aa23.59■■□□□ 1.37
CCDC61-207ENST00000599044 PAGE1O75459 146 aa23.59■■□□□ 1.37
CCDC61-207ENST00000599044 ADCY5O95622 1261 aa23.59■■□□□ 1.37
CCDC61-207ENST00000599044 PTMSP20962 102 aa23.59■■□□□ 1.37
CCDC61-207ENST00000599044 CD27P26842 260 aa23.59■■□□□ 1.37
CCDC61-207ENST00000599044 CDH5P33151 784 aaPredicted RBP23.59■■□□□ 1.37
CCDC61-207ENST00000599044 PLK1P53350 603 aa23.59■■□□□ 1.37
CCDC61-207ENST00000599044 METAP1P53582 386 aa23.59■■□□□ 1.37
CCDC61-207ENST00000599044 TCP11X2Q5H9J9 407 aa23.59■■□□□ 1.37
CCDC61-207ENST00000599044 RABGAP1LQ5R372 815 aa23.59■■□□□ 1.37
CCDC61-207ENST00000599044 KIAA0895LQ68EN5 471 aa23.59■■□□□ 1.37
CCDC61-207ENST00000599044 SMYD5Q6GMV2 418 aa23.59■■□□□ 1.37
CCDC61-207ENST00000599044 PNPLA1Q8N8W4 532 aa23.59■■□□□ 1.37
CCDC61-207ENST00000599044 FRS2Q8WU20 508 aa23.59■■□□□ 1.37
CCDC61-207ENST00000599044 NPY6RQ99463 290 aa23.59■■□□□ 1.37
CCDC61-207ENST00000599044 TMPRSS4Q9NRS4 437 aa23.59■■□□□ 1.37
CCDC61-207ENST00000599044 TM7SF3Q9NS93 570 aa23.59■■□□□ 1.37
CCDC61-207ENST00000599044 ANKRD11Q6UB99 2663 aaPredicted RBP23.58■■□□□ 1.37
CCDC61-207ENST00000599044 PES1O00541 588 aaKnown RBP23.58■■□□□ 1.37
CCDC61-207ENST00000599044 RNASEH1O60930 286 aaKnown RBP23.58■■□□□ 1.37
CCDC61-207ENST00000599044 RNASEH2AO75792 299 aaKnown RBP23.58■■□□□ 1.37
CCDC61-207ENST00000599044 PSMD8P48556 350 aa23.58■■□□□ 1.37
CCDC61-207ENST00000599044 BPIFB4P59827 614 aa23.58■■□□□ 1.37
CCDC61-207ENST00000599044 SLC12A1Q13621 1099 aa23.58■■□□□ 1.37
CCDC61-207ENST00000599044 KLHL40Q2TBA0 621 aa23.58■■□□□ 1.37
CCDC61-207ENST00000599044 TTC39BQ5VTQ0 682 aaPredicted RBP23.58■■□□□ 1.37
CCDC61-207ENST00000599044 RNF219Q5W0B1 726 aaPredicted RBP23.58■■□□□ 1.37
CCDC61-207ENST00000599044 NCEH1Q6PIU2 408 aa23.58■■□□□ 1.37
CCDC61-207ENST00000599044 NOP9Q86U38 636 aaKnown RBP23.58■■□□□ 1.37
CCDC61-207ENST00000599044 SIK2Q9H0K1 926 aa23.58■■□□□ 1.37
CCDC61-207ENST00000599044 OSGEPQ9NPF4 335 aa23.58■■□□□ 1.37
CCDC61-207ENST00000599044 TAB2Q9NYJ8 693 aa23.58■■□□□ 1.37
CCDC61-207ENST00000599044 DACH1Q9UI36 760 aa23.58■■□□□ 1.37
CCDC61-207ENST00000599044 PCOLCE2Q9UKZ9 415 aa23.58■■□□□ 1.37
CCDC61-207ENST00000599044 SCML1Q9UN30 329 aa23.58■■□□□ 1.37
CCDC61-207ENST00000599044 ANKRD6Q9Y2G4 727 aa23.58■■□□□ 1.37
CCDC61-207ENST00000599044 OR51B4Q9Y5P0 310 aa23.58■■□□□ 1.37
CCDC61-207ENST00000599044 C10orf142B7Z368 130 aa23.57■■□□□ 1.36
CCDC61-207ENST00000599044 CNTN5O94779 1100 aa23.57■■□□□ 1.36
CCDC61-207ENST00000599044 CER1O95813 267 aa23.57■■□□□ 1.36
CCDC61-207ENST00000599044 UCHL3P15374 230 aa23.57■■□□□ 1.36
CCDC61-207ENST00000599044 GABRB2P47870 512 aa23.57■■□□□ 1.36
CCDC61-207ENST00000599044 KLK7P49862 253 aa23.57■■□□□ 1.36
CCDC61-207ENST00000599044 CCDC183Q5T5S1 534 aa23.57■■□□□ 1.36
CCDC61-207ENST00000599044 TRNP1Q6NT89 227 aa23.57■■□□□ 1.36
CCDC61-207ENST00000599044 CAVIN1Q6NZI2 390 aaKnown RBP23.57■■□□□ 1.36
CCDC61-207ENST00000599044 IL27RAQ6UWB1 636 aa23.57■■□□□ 1.36
CCDC61-207ENST00000599044 DBX2Q6ZNG2 339 aa23.57■■□□□ 1.36
CCDC61-207ENST00000599044 XYLT1Q86Y38 959 aa23.57■■□□□ 1.36
CCDC61-207ENST00000599044 TMEM35BQ8NCS4 154 aa23.57■■□□□ 1.36
CCDC61-207ENST00000599044 SETD7Q8WTS6 366 aaKnown RBP23.57■■□□□ 1.36
CCDC61-207ENST00000599044 NT5C3BQ969T7 300 aa23.57■■□□□ 1.36
CCDC61-207ENST00000599044 OMDQ99983 421 aa23.57■■□□□ 1.36
CCDC61-207ENST00000599044 FEM1AQ9BSK4 669 aa23.57■■□□□ 1.36
CCDC61-207ENST00000599044 PDCL3Q9H2J4 239 aa23.57■■□□□ 1.36
CCDC61-207ENST00000599044 ARHGEF38Q9NXL2 777 aa23.57■■□□□ 1.36
CCDC61-207ENST00000599044 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.57■■□□□ 1.36
CCDC61-207ENST00000599044 ADAMTS1Q9UHI8 967 aa23.57■■□□□ 1.36
CCDC61-207ENST00000599044 CACNA1GO43497 2377 aa23.57■■□□□ 1.36
CCDC61-207ENST00000599044 CABIN1Q9Y6J0 2220 aa23.56■■□□□ 1.36
CCDC61-207ENST00000599044 DMXL2Q8TDJ6 3036 aa23.56■■□□□ 1.36
CCDC61-207ENST00000599044 PLK4O00444 970 aa23.56■■□□□ 1.36
CCDC61-207ENST00000599044 WNT9AO14904 365 aa23.56■■□□□ 1.36
CCDC61-207ENST00000599044 ZNF883P0CG24 379 aa23.56■■□□□ 1.36
CCDC61-207ENST00000599044 CXCR3P49682 368 aa23.56■■□□□ 1.36
CCDC61-207ENST00000599044 HNRNPDQ14103 355 aaKnown RBP23.56■■□□□ 1.36
CCDC61-207ENST00000599044 C5orf22Q49AR2 442 aa23.56■■□□□ 1.36
CCDC61-207ENST00000599044 ARTNQ5T4W7 220 aa23.56■■□□□ 1.36
CCDC61-207ENST00000599044 RAB44Q7Z6P3 723 aaPredicted RBP23.56■■□□□ 1.36
CCDC61-207ENST00000599044 SLCO6A1Q86UG4 719 aa23.56■■□□□ 1.36
CCDC61-207ENST00000599044 ZNF683Q8IZ20 524 aa23.56■■□□□ 1.36
CCDC61-207ENST00000599044 KDF1Q8NAX2 398 aaPredicted RBP23.56■■□□□ 1.36
CCDC61-207ENST00000599044 SLC6A18Q96N87 628 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms