RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 NYNRINQ9P2P1 1898 aaKnown RBP20.22■□□□□ 0.83
SHKBP1-214ENST00000597396 TMEM110-MUSTN1A8MSY1 372 aa20.21■□□□□ 0.83
SHKBP1-214ENST00000597396 K7ESF4 209 aa20.21■□□□□ 0.83
SHKBP1-214ENST00000597396 ADAM23O75077 832 aa20.21■□□□□ 0.83
SHKBP1-214ENST00000597396 ASLP04424 464 aa20.21■□□□□ 0.83
SHKBP1-214ENST00000597396 RHOQP17081 205 aa20.21■□□□□ 0.83
SHKBP1-214ENST00000597396 MZF1P28698 734 aaPredicted RBP20.21■□□□□ 0.83
SHKBP1-214ENST00000597396 CRY1Q16526 586 aa20.21■□□□□ 0.83
SHKBP1-214ENST00000597396 ZNF528Q3MIS6 628 aa20.21■□□□□ 0.83
SHKBP1-214ENST00000597396 C6orf118Q5T5N4 469 aa20.21■□□□□ 0.83
SHKBP1-214ENST00000597396 RNF219Q5W0B1 726 aaPredicted RBP20.21■□□□□ 0.83
SHKBP1-214ENST00000597396 SERPINA13PQ6UXR4 307 aa20.21■□□□□ 0.83
SHKBP1-214ENST00000597396 ASCL5Q7RTU5 278 aa20.21■□□□□ 0.83
SHKBP1-214ENST00000597396 SETD3Q86TU7 594 aaPredicted RBP20.21■□□□□ 0.83
SHKBP1-214ENST00000597396 APCDD1Q8J025 514 aa20.21■□□□□ 0.83
SHKBP1-214ENST00000597396 TSTD1Q8NFU3 115 aa20.21■□□□□ 0.83
SHKBP1-214ENST00000597396 TTC17Q96AE7 1141 aa20.21■□□□□ 0.83
SHKBP1-214ENST00000597396 ZWILCHQ9H900 591 aa20.21■□□□□ 0.83
SHKBP1-214ENST00000597396 POLMQ9NP87 494 aaPredicted RBP20.21■□□□□ 0.83
SHKBP1-214ENST00000597396 TBC1D30Q9Y2I9 924 aa20.21■□□□□ 0.83
SHKBP1-214ENST00000597396 STON1Q9Y6Q2 735 aa20.21■□□□□ 0.83
SHKBP1-214ENST00000597396 PRR23AA6NEV1 266 aa20.2■□□□□ 0.82
SHKBP1-214ENST00000597396 PROSCO94903 275 aa20.2■□□□□ 0.82
SHKBP1-214ENST00000597396 APBB3O95704 486 aa20.2■□□□□ 0.82
SHKBP1-214ENST00000597396 DLDP09622 509 aaKnown RBP20.2■□□□□ 0.82
SHKBP1-214ENST00000597396 EPHB2P29323 1055 aa20.2■□□□□ 0.82
SHKBP1-214ENST00000597396 IL12RB1P42701 662 aa20.2■□□□□ 0.82
SHKBP1-214ENST00000597396 NUMBP49757 651 aa20.2■□□□□ 0.82
SHKBP1-214ENST00000597396 DGKEP52429 567 aa20.2■□□□□ 0.82
SHKBP1-214ENST00000597396 NRLP54845 237 aa20.2■□□□□ 0.82
SHKBP1-214ENST00000597396 TPI1P60174 286 aa20.2■□□□□ 0.82
SHKBP1-214ENST00000597396 ST8SIA6P61647 398 aa20.2■□□□□ 0.82
SHKBP1-214ENST00000597396 MESDQ14696 234 aa20.2■□□□□ 0.82
SHKBP1-214ENST00000597396 HADHQ16836 314 aaKnown RBP20.2■□□□□ 0.82
SHKBP1-214ENST00000597396 BOLA3Q53S33 107 aa20.2■□□□□ 0.82
SHKBP1-214ENST00000597396 ARTNQ5T4W7 220 aa20.2■□□□□ 0.82
SHKBP1-214ENST00000597396 HEATR6Q6AI08 1181 aaKnown RBP20.2■□□□□ 0.82
SHKBP1-214ENST00000597396 TMEM92Q6UXU6 159 aa20.2■□□□□ 0.82
SHKBP1-214ENST00000597396 RAD9BQ6WBX8 426 aa20.2■□□□□ 0.82
SHKBP1-214ENST00000597396 PSTKQ8IV42 348 aaKnown RBP20.2■□□□□ 0.82
SHKBP1-214ENST00000597396 CAMKK1Q8N5S9 505 aa20.2■□□□□ 0.82
SHKBP1-214ENST00000597396 NKD2Q969F2 451 aaPredicted RBP20.2■□□□□ 0.82
SHKBP1-214ENST00000597396 FAM126AQ9BYI3 521 aaPredicted RBP20.2■□□□□ 0.82
SHKBP1-214ENST00000597396 RETREG1Q9H6L5 497 aa20.2■□□□□ 0.82
SHKBP1-214ENST00000597396 VPS28Q9UK41 221 aa20.2■□□□□ 0.82
SHKBP1-214ENST00000597396 WASH3PC4AMC7 463 aa20.19■□□□□ 0.82
SHKBP1-214ENST00000597396 EEF2KO00418 725 aaKnown RBP20.19■□□□□ 0.82
SHKBP1-214ENST00000597396 MTA2O94776 668 aa20.19■□□□□ 0.82
SHKBP1-214ENST00000597396 ALDH1A2O94788 518 aa20.19■□□□□ 0.82
SHKBP1-214ENST00000597396 TCF4P15884 667 aa20.19■□□□□ 0.82
SHKBP1-214ENST00000597396 HTR7P34969 479 aa20.19■□□□□ 0.82
SHKBP1-214ENST00000597396 NOP2P46087 812 aaKnown RBP20.19■□□□□ 0.82
SHKBP1-214ENST00000597396 PLK1P53350 603 aa20.19■□□□□ 0.82
SHKBP1-214ENST00000597396 SULT2A1Q06520 285 aa20.19■□□□□ 0.82
SHKBP1-214ENST00000597396 SEMA3BQ13214 749 aa20.19■□□□□ 0.82
SHKBP1-214ENST00000597396 STARD3Q14849 445 aa20.19■□□□□ 0.82
SHKBP1-214ENST00000597396 CA9Q16790 459 aa20.19■□□□□ 0.82
SHKBP1-214ENST00000597396 SMTNL2Q2TAL5 461 aa20.19■□□□□ 0.82
SHKBP1-214ENST00000597396 PPP6R3Q5H9R7 873 aaPredicted RBP20.19■□□□□ 0.82
SHKBP1-214ENST00000597396 CYP4V2Q6ZWL3 525 aaPredicted RBP20.19■□□□□ 0.82
SHKBP1-214ENST00000597396 TMEM139Q8IV31 216 aa20.19■□□□□ 0.82
SHKBP1-214ENST00000597396 OR52K2Q8NGK3 314 aa20.19■□□□□ 0.82
SHKBP1-214ENST00000597396 HSPH1Q92598 858 aa20.19■□□□□ 0.82
SHKBP1-214ENST00000597396 KCTD15Q96SI1 283 aaPredicted RBP20.19■□□□□ 0.82
SHKBP1-214ENST00000597396 GABRG3Q99928 467 aa20.19■□□□□ 0.82
SHKBP1-214ENST00000597396 FEM1AQ9BSK4 669 aa20.19■□□□□ 0.82
SHKBP1-214ENST00000597396 CATSPERBQ9H7T0 1116 aa20.19■□□□□ 0.82
SHKBP1-214ENST00000597396 TMEM248Q9NWD8 314 aa20.19■□□□□ 0.82
SHKBP1-214ENST00000597396 RAD54BQ9Y620 910 aa20.19■□□□□ 0.82
SHKBP1-214ENST00000597396 TCRBV21S2A2A0A5A6 115 aa20.18■□□□□ 0.82
SHKBP1-214ENST00000597396 ZBTB24O43167 697 aaPredicted RBP20.18■□□□□ 0.82
SHKBP1-214ENST00000597396 TDGF1P13385 188 aa20.18■□□□□ 0.82
SHKBP1-214ENST00000597396 IL1R2P27930 398 aa20.18■□□□□ 0.82
SHKBP1-214ENST00000597396 HOXC13P31276 330 aa20.18■□□□□ 0.82
SHKBP1-214ENST00000597396 MAN1A1P33908 653 aa20.18■□□□□ 0.82
SHKBP1-214ENST00000597396 GJC1P36383 396 aa20.18■□□□□ 0.82
SHKBP1-214ENST00000597396 ARHGAP25P42331 645 aa20.18■□□□□ 0.82
SHKBP1-214ENST00000597396 PXNP49023 591 aaPredicted RBP20.18■□□□□ 0.82
SHKBP1-214ENST00000597396 MAPKAPK2P49137 400 aa20.18■□□□□ 0.82
SHKBP1-214ENST00000597396 FNTBP49356 437 aa20.18■□□□□ 0.82
SHKBP1-214ENST00000597396 ECT2LQ008S8 904 aa20.18■□□□□ 0.82
SHKBP1-214ENST00000597396 KCNT1Q5JUK3 1230 aa20.18■□□□□ 0.82
SHKBP1-214ENST00000597396 ZNF783Q6ZMS7 281 aa20.18■□□□□ 0.82
SHKBP1-214ENST00000597396 ERLEC1Q96DZ1 483 aa20.18■□□□□ 0.82
SHKBP1-214ENST00000597396 ZSCAN32Q9NX65 697 aa20.18■□□□□ 0.82
SHKBP1-214ENST00000597396 BCCIPQ9P287 314 aaKnown RBP eCLIP20.18■□□□□ 0.82
SHKBP1-214ENST00000597396 ZNF212Q9UDV6 495 aa20.18■□□□□ 0.82
SHKBP1-214ENST00000597396 DNAI1Q9UI46 699 aa20.18■□□□□ 0.82
SHKBP1-214ENST00000597396 SLC25A13Q9UJS0 675 aa20.18■□□□□ 0.82
SHKBP1-214ENST00000597396 NEU3Q9UQ49 428 aa20.18■□□□□ 0.82
SHKBP1-214ENST00000597396 ERVW-1Q9UQF0 538 aa20.18■□□□□ 0.82
SHKBP1-214ENST00000597396 PTPRZ1P23471 2315 aaPredicted RBP20.18■□□□□ 0.82
SHKBP1-214ENST00000597396 MYO15AQ9UKN7 3530 aa20.17■□□□□ 0.82
SHKBP1-214ENST00000597396 ILVBLA1L0T0 632 aa20.17■□□□□ 0.82
SHKBP1-214ENST00000597396 FGF10O15520 208 aaPredicted RBP20.17■□□□□ 0.82
SHKBP1-214ENST00000597396 DAPK3O43293 454 aa20.17■□□□□ 0.82
SHKBP1-214ENST00000597396 SYNCRIPO60506 623 aaKnown RBP20.17■□□□□ 0.82
SHKBP1-214ENST00000597396 EPHX1P07099 455 aa20.17■□□□□ 0.82
SHKBP1-214ENST00000597396 SRPRAP08240 638 aaKnown RBP20.17■□□□□ 0.82
SHKBP1-214ENST00000597396 RARAP10276 462 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms