RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 RPRD1AQ96P16 312 aaPredicted RBP15.44■□□□□ 0.06
TRIM28-207ENST00000597136 PSMB7Q99436 277 aa15.44■□□□□ 0.06
TRIM28-207ENST00000597136 GPATCH2LQ9NWQ4 482 aa15.44■□□□□ 0.06
TRIM28-207ENST00000597136 DDX56Q9NY93 547 aaKnown RBP15.44■□□□□ 0.06
TRIM28-207ENST00000597136 MPP6Q9NZW5 540 aa15.44■□□□□ 0.06
TRIM28-207ENST00000597136 SNX12Q9UMY4 172 aa15.44■□□□□ 0.06
TRIM28-207ENST00000597136 AP4E1Q9UPM8 1137 aa15.44■□□□□ 0.06
TRIM28-207ENST00000597136 ANKRD36A6QL64 1941 aa15.44■□□□□ 0.06
TRIM28-207ENST00000597136 NUMA1Q14980 2115 aa15.44■□□□□ 0.06
TRIM28-207ENST00000597136 RALGAPA1Q6GYQ0 2036 aa15.43■□□□□ 0.06
TRIM28-207ENST00000597136 KCNK3O14649 394 aa15.43■□□□□ 0.06
TRIM28-207ENST00000597136 PRLRP16471 622 aa15.43■□□□□ 0.06
TRIM28-207ENST00000597136 CXCR5P32302 372 aa15.43■□□□□ 0.06
TRIM28-207ENST00000597136 CD70P32970 193 aa15.43■□□□□ 0.06
TRIM28-207ENST00000597136 RPS9P46781 194 aaKnown RBP15.43■□□□□ 0.06
TRIM28-207ENST00000597136 CA9Q16790 459 aa15.43■□□□□ 0.06
TRIM28-207ENST00000597136 C5orf22Q49AR2 442 aa15.43■□□□□ 0.06
TRIM28-207ENST00000597136 ALFQ53S48 1182 aa15.43■□□□□ 0.06
TRIM28-207ENST00000597136 DTWD2Q8NBA8 298 aa15.43■□□□□ 0.06
TRIM28-207ENST00000597136 OR52K2Q8NGK3 314 aa15.43■□□□□ 0.06
TRIM28-207ENST00000597136 KIF18AQ8NI77 898 aa15.43■□□□□ 0.06
TRIM28-207ENST00000597136 RAPGEF5Q92565 580 aa15.43■□□□□ 0.06
TRIM28-207ENST00000597136 LMLNQ96KR4 655 aa15.43■□□□□ 0.06
TRIM28-207ENST00000597136 SLC2A11Q9BYW1 496 aa15.43■□□□□ 0.06
TRIM28-207ENST00000597136 CHRDQ9H2X0 955 aa15.43■□□□□ 0.06
TRIM28-207ENST00000597136 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.43■□□□□ 0.06
TRIM28-207ENST00000597136 ABCB8Q9NUT2 735 aa15.43■□□□□ 0.06
TRIM28-207ENST00000597136 KLHL11Q9NVR0 708 aa15.43■□□□□ 0.06
TRIM28-207ENST00000597136 OR12D3Q9UGF7 316 aa15.43■□□□□ 0.06
TRIM28-207ENST00000597136 THADAQ6YHU6 1953 aa15.43■□□□□ 0.06
TRIM28-207ENST00000597136 DRGXA6NNA5 263 aa15.42■□□□□ 0.06
TRIM28-207ENST00000597136 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.42■□□□□ 0.06
TRIM28-207ENST00000597136 E9PAM4 449 aa15.42■□□□□ 0.06
TRIM28-207ENST00000597136 ZRANB2O95218 330 aaKnown RBP eCLIP15.42■□□□□ 0.06
TRIM28-207ENST00000597136 PYGMP11217 842 aa15.42■□□□□ 0.06
TRIM28-207ENST00000597136 TIE1P35590 1138 aa15.42■□□□□ 0.06
TRIM28-207ENST00000597136 TNFRSF4P43489 277 aa15.42■□□□□ 0.06
TRIM28-207ENST00000597136 KIR2DL1P43626 348 aaPredicted RBP15.42■□□□□ 0.06
TRIM28-207ENST00000597136 ARSEP51690 589 aa15.42■□□□□ 0.06
TRIM28-207ENST00000597136 LRRC32Q14392 662 aa15.42■□□□□ 0.06
TRIM28-207ENST00000597136 DPYSL2Q16555 572 aa15.42■□□□□ 0.06
TRIM28-207ENST00000597136 EFHC2Q5JST6 749 aa15.42■□□□□ 0.06
TRIM28-207ENST00000597136 ZFYVE27Q5T4F4 411 aa15.42■□□□□ 0.06
TRIM28-207ENST00000597136 MFN1Q8IWA4 741 aa15.42■□□□□ 0.06
TRIM28-207ENST00000597136 RCOR2Q8IZ40 523 aa15.42■□□□□ 0.06
TRIM28-207ENST00000597136 KCTD6Q8NC69 237 aa15.42■□□□□ 0.06
TRIM28-207ENST00000597136 EXD1Q8NHP7 514 aa15.42■□□□□ 0.06
TRIM28-207ENST00000597136 RPLP0P6Q8NHW5 317 aa15.42■□□□□ 0.06
TRIM28-207ENST00000597136 FIBINQ8TAL6 211 aa15.42■□□□□ 0.06
TRIM28-207ENST00000597136 SORCS1Q8WY21 1168 aa15.42■□□□□ 0.06
TRIM28-207ENST00000597136 OSBPL9Q96SU4 736 aa15.42■□□□□ 0.06
TRIM28-207ENST00000597136 DHX35Q9H5Z1 703 aaKnown RBP15.42■□□□□ 0.06
TRIM28-207ENST00000597136 INTS6Q9UL03 887 aaKnown RBP15.42■□□□□ 0.06
TRIM28-207ENST00000597136 SLC27A6Q9Y2P4 619 aa15.42■□□□□ 0.06
TRIM28-207ENST00000597136 SAR1BQ9Y6B6 198 aa15.42■□□□□ 0.06
TRIM28-207ENST00000597136 C3orf70A6NLC5 250 aaPredicted RBP15.41■□□□□ 0.06
TRIM28-207ENST00000597136 LUC7L3O95232 432 aaKnown RBP15.41■□□□□ 0.06
TRIM28-207ENST00000597136 KRT1P04264 644 aa15.41■□□□□ 0.06
TRIM28-207ENST00000597136 TCP1P17987 556 aaKnown RBP15.41■□□□□ 0.06
TRIM28-207ENST00000597136 L1CAMP32004 1257 aa15.41■□□□□ 0.06
TRIM28-207ENST00000597136 LMAN2Q12907 356 aa15.41■□□□□ 0.06
TRIM28-207ENST00000597136 RABGAP1LQ5R372 815 aa15.41■□□□□ 0.06
TRIM28-207ENST00000597136 KIAA0907Q7Z7F0 614 aaPredicted RBP15.41■□□□□ 0.06
TRIM28-207ENST00000597136 CCDC33Q8N5R6 958 aa15.41■□□□□ 0.06
TRIM28-207ENST00000597136 FAM71BQ8TC56 605 aa15.41■□□□□ 0.06
TRIM28-207ENST00000597136 USP33Q8TEY7 942 aa15.41■□□□□ 0.06
TRIM28-207ENST00000597136 EXOC4Q96A65 974 aa15.41■□□□□ 0.06
TRIM28-207ENST00000597136 ACOX2Q99424 681 aa15.41■□□□□ 0.06
TRIM28-207ENST00000597136 OSBPL2Q9H1P3 480 aa15.41■□□□□ 0.06
TRIM28-207ENST00000597136 CARD9Q9H257 536 aa15.41■□□□□ 0.06
TRIM28-207ENST00000597136 DMDP11532 3685 aa15.41■□□□□ 0.06
TRIM28-207ENST00000597136 IGLV3-10A0A075B6K4 115 aa15.41■□□□□ 0.06
TRIM28-207ENST00000597136 LRRD1A4D1F6 860 aa15.41■□□□□ 0.06
TRIM28-207ENST00000597136 H0Y626 953 aa15.41■□□□□ 0.06
TRIM28-207ENST00000597136 CD48P09326 243 aa15.41■□□□□ 0.06
TRIM28-207ENST00000597136 KDELR1P24390 212 aa15.41■□□□□ 0.06
TRIM28-207ENST00000597136 CDH6P55285 790 aa15.41■□□□□ 0.06
TRIM28-207ENST00000597136 MTA1Q13330 715 aa15.41■□□□□ 0.06
TRIM28-207ENST00000597136 ZNF211Q13398 564 aaPredicted RBP15.41■□□□□ 0.06
TRIM28-207ENST00000597136 PDK2Q15119 407 aa15.41■□□□□ 0.06
TRIM28-207ENST00000597136 ODF2Q5BJF6 829 aa15.41■□□□□ 0.06
TRIM28-207ENST00000597136 MANEALQ5VSG8 457 aa15.41■□□□□ 0.06
TRIM28-207ENST00000597136 EGFLAMQ63HQ2 1017 aa15.41■□□□□ 0.06
TRIM28-207ENST00000597136 CXorf57Q6NSI4 855 aaKnown RBP15.41■□□□□ 0.06
TRIM28-207ENST00000597136 MFSD7Q6UXD7 560 aa15.41■□□□□ 0.06
TRIM28-207ENST00000597136 LRRC31Q6UY01 552 aa15.41■□□□□ 0.06
TRIM28-207ENST00000597136 ADIPOR2Q86V24 386 aa15.41■□□□□ 0.06
TRIM28-207ENST00000597136 MAML2Q8IZL2 1156 aaPredicted RBP15.41■□□□□ 0.06
TRIM28-207ENST00000597136 APCDD1Q8J025 514 aa15.41■□□□□ 0.06
TRIM28-207ENST00000597136 SYNPOQ8N3V7 929 aa15.41■□□□□ 0.06
TRIM28-207ENST00000597136 ALLCQ8N6M5 410 aa15.41■□□□□ 0.06
TRIM28-207ENST00000597136 COG1Q8WTW3 980 aa15.41■□□□□ 0.06
TRIM28-207ENST00000597136 RNF25Q96BH1 459 aaPredicted RBP15.41■□□□□ 0.06
TRIM28-207ENST00000597136 RBM41Q96IZ5 413 aaKnown RBP15.41■□□□□ 0.06
TRIM28-207ENST00000597136 PBKQ96KB5 322 aa15.41■□□□□ 0.06
TRIM28-207ENST00000597136 KCTD15Q96SI1 283 aaPredicted RBP15.41■□□□□ 0.06
TRIM28-207ENST00000597136 PCDH18Q9HCL0 1135 aa15.41■□□□□ 0.06
TRIM28-207ENST00000597136 SPATA6Q9NWH7 488 aaPredicted RBP15.41■□□□□ 0.06
TRIM28-207ENST00000597136 RAPGEFL1Q9UHV5 662 aa15.41■□□□□ 0.06
TRIM28-207ENST00000597136 NEU3Q9UQ49 428 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms