RNA–Protein interactions for RNA: ENST00000596788.1

IRF3-214, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-214ENST00000596788 LIMD1Q9UGP4 676 aa21.42■■□□□ 1.02
IRF3-214ENST00000596788 CLEC4EQ9ULY5 219 aa21.42■■□□□ 1.02
IRF3-214ENST00000596788 SPTBN5Q9NRC6 3674 aaKnown RBP21.42■■□□□ 1.02
IRF3-214ENST00000596788 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.41■■□□□ 1.02
IRF3-214ENST00000596788 OTOL1A6NHN0 477 aaPredicted RBP21.41■■□□□ 1.02
IRF3-214ENST00000596788 ARNTLO00327 626 aa21.41■■□□□ 1.02
IRF3-214ENST00000596788 HOXC11O43248 304 aaPredicted RBP21.41■■□□□ 1.02
IRF3-214ENST00000596788 RHOCP08134 193 aa21.41■■□□□ 1.02
IRF3-214ENST00000596788 TYRP14679 529 aa21.41■■□□□ 1.02
IRF3-214ENST00000596788 OR1E1P30953 314 aa21.41■■□□□ 1.02
IRF3-214ENST00000596788 ZNF177Q13360 481 aaPredicted RBP21.41■■□□□ 1.02
IRF3-214ENST00000596788 CDH18Q13634 790 aa21.41■■□□□ 1.02
IRF3-214ENST00000596788 AAK1Q2M2I8 961 aa21.41■■□□□ 1.02
IRF3-214ENST00000596788 GAB4Q2WGN9 574 aa21.41■■□□□ 1.02
IRF3-214ENST00000596788 MFN1Q8IWA4 741 aa21.41■■□□□ 1.02
IRF3-214ENST00000596788 LZTR1Q8N653 840 aa21.41■■□□□ 1.02
IRF3-214ENST00000596788 TTC13Q8NBP0 860 aa21.41■■□□□ 1.02
IRF3-214ENST00000596788 LRRC19Q9H756 370 aa21.41■■□□□ 1.02
IRF3-214ENST00000596788 TBC1D30Q9Y2I9 924 aa21.41■■□□□ 1.02
IRF3-214ENST00000596788 GOLGA6L10A0A0M3HER8 536 aa21.4■■□□□ 1.02
IRF3-214ENST00000596788 LOC730098B7Z3J9 87 aa21.4■■□□□ 1.02
IRF3-214ENST00000596788 NR2C2P49116 596 aa21.4■■□□□ 1.02
IRF3-214ENST00000596788 NDST2P52849 883 aa21.4■■□□□ 1.02
IRF3-214ENST00000596788 C2orf54Q08AI8 447 aa21.4■■□□□ 1.02
IRF3-214ENST00000596788 GALNT2Q10471 571 aa21.4■■□□□ 1.02
IRF3-214ENST00000596788 CYP1B1Q16678 543 aa21.4■■□□□ 1.02
IRF3-214ENST00000596788 FSCBQ5H9T9 825 aa21.4■■□□□ 1.02
IRF3-214ENST00000596788 C6orf118Q5T5N4 469 aa21.4■■□□□ 1.02
IRF3-214ENST00000596788 CPA6Q8N4T0 437 aa21.4■■□□□ 1.02
IRF3-214ENST00000596788 C12orf50Q8NA57 414 aaPredicted RBP21.4■■□□□ 1.02
IRF3-214ENST00000596788 SLC35B2Q8TB61 432 aa21.4■■□□□ 1.02
IRF3-214ENST00000596788 HMCESQ96FZ2 354 aa21.4■■□□□ 1.02
IRF3-214ENST00000596788 SLC39A8Q9C0K1 460 aa21.4■■□□□ 1.02
IRF3-214ENST00000596788 ECT2Q9H8V3 914 aa21.4■■□□□ 1.02
IRF3-214ENST00000596788 KCNK12Q9HB15 430 aa21.4■■□□□ 1.02
IRF3-214ENST00000596788 RBM12Q9NTZ6 932 aaKnown RBP21.4■■□□□ 1.02
IRF3-214ENST00000596788 DONSONQ9NYP3 566 aa21.4■■□□□ 1.02
IRF3-214ENST00000596788 RASA4BC9J798 803 aa21.39■■□□□ 1.01
IRF3-214ENST00000596788 H0Y626 953 aa21.39■■□□□ 1.01
IRF3-214ENST00000596788 RASA4O43374 803 aa21.39■■□□□ 1.01
IRF3-214ENST00000596788 LIASO43766 372 aa21.39■■□□□ 1.01
IRF3-214ENST00000596788 CACNG3O60359 315 aa21.39■■□□□ 1.01
IRF3-214ENST00000596788 RAMP2O60895 175 aa21.39■■□□□ 1.01
IRF3-214ENST00000596788 PHF2O75151 1096 aa21.39■■□□□ 1.01
IRF3-214ENST00000596788 ASGR2P07307 311 aa21.39■■□□□ 1.01
IRF3-214ENST00000596788 EIF3EP60228 445 aaKnown RBP21.39■■□□□ 1.01
IRF3-214ENST00000596788 GAD2Q05329 585 aa21.39■■□□□ 1.01
IRF3-214ENST00000596788 RUNX3Q13761 415 aa21.39■■□□□ 1.01
IRF3-214ENST00000596788 SETD3Q86TU7 594 aaPredicted RBP21.39■■□□□ 1.01
IRF3-214ENST00000596788 C12orf40Q86WS4 652 aa21.39■■□□□ 1.01
IRF3-214ENST00000596788 SPATA4Q8NEY3 305 aa21.39■■□□□ 1.01
IRF3-214ENST00000596788 LRRN4Q8WUT4 740 aa21.39■■□□□ 1.01
IRF3-214ENST00000596788 NXPE3Q969Y0 559 aa21.39■■□□□ 1.01
IRF3-214ENST00000596788 CARD6Q9BX69 1037 aa21.39■■□□□ 1.01
IRF3-214ENST00000596788 BRD9Q9H8M2 597 aa21.39■■□□□ 1.01
IRF3-214ENST00000596788 GTSE1Q9NYZ3 720 aa21.39■■□□□ 1.01
IRF3-214ENST00000596788 IGSF9Q9P2J2 1179 aa21.39■■□□□ 1.01
IRF3-214ENST00000596788 DNPEPQ9ULA0 475 aa21.39■■□□□ 1.01
IRF3-214ENST00000596788 RAD54BQ9Y620 910 aa21.39■■□□□ 1.01
IRF3-214ENST00000596788 ILVBLA1L0T0 632 aa21.38■■□□□ 1.01
IRF3-214ENST00000596788 DFFAO00273 331 aa21.38■■□□□ 1.01
IRF3-214ENST00000596788 MCF2LO15068 1137 aa21.38■■□□□ 1.01
IRF3-214ENST00000596788 ACVRL1P37023 503 aa21.38■■□□□ 1.01
IRF3-214ENST00000596788 CSKP41240 450 aa21.38■■□□□ 1.01
IRF3-214ENST00000596788 GNA12Q03113 381 aa21.38■■□□□ 1.01
IRF3-214ENST00000596788 LMAN2Q12907 356 aa21.38■■□□□ 1.01
IRF3-214ENST00000596788 SNX1Q13596 522 aa21.38■■□□□ 1.01
IRF3-214ENST00000596788 CCNG2Q16589 344 aa21.38■■□□□ 1.01
IRF3-214ENST00000596788 PARP15Q460N3 678 aa21.38■■□□□ 1.01
IRF3-214ENST00000596788 ASTLQ6HA08 431 aaPredicted RBP21.38■■□□□ 1.01
IRF3-214ENST00000596788 ARHGAP36Q6ZRI8 547 aa21.38■■□□□ 1.01
IRF3-214ENST00000596788 B4GALNT4Q76KP1 1039 aa21.38■■□□□ 1.01
IRF3-214ENST00000596788 ZC3H18Q86VM9 953 aaKnown RBP21.38■■□□□ 1.01
IRF3-214ENST00000596788 LRRN4CLQ8ND94 238 aa21.38■■□□□ 1.01
IRF3-214ENST00000596788 OR7D4Q8NG98 312 aa21.38■■□□□ 1.01
IRF3-214ENST00000596788 FIBINQ8TAL6 211 aa21.38■■□□□ 1.01
IRF3-214ENST00000596788 TTC8Q8TAM2 541 aa21.38■■□□□ 1.01
IRF3-214ENST00000596788 LMLNQ96KR4 655 aa21.38■■□□□ 1.01
IRF3-214ENST00000596788 QKIQ96PU8 341 aaKnown RBP eCLIP21.38■■□□□ 1.01
IRF3-214ENST00000596788 FRMD8P1Q9BZ68 369 aaPredicted RBP21.38■■□□□ 1.01
IRF3-214ENST00000596788 DDX47Q9H0S4 455 aaKnown RBP21.38■■□□□ 1.01
IRF3-214ENST00000596788 A0A0D9SEW6 157 aa21.37■■□□□ 1.01
IRF3-214ENST00000596788 CCDC188H7C350 402 aa21.37■■□□□ 1.01
IRF3-214ENST00000596788 MZF1P28698 734 aaPredicted RBP21.37■■□□□ 1.01
IRF3-214ENST00000596788 CD70P32970 193 aa21.37■■□□□ 1.01
IRF3-214ENST00000596788 GARSP41250 739 aaKnown RBP21.37■■□□□ 1.01
IRF3-214ENST00000596788 NUMBP49757 651 aa21.37■■□□□ 1.01
IRF3-214ENST00000596788 PAPOLAP51003 745 aaKnown RBP21.37■■□□□ 1.01
IRF3-214ENST00000596788 YBEYP58557 167 aaPredicted RBP21.37■■□□□ 1.01
IRF3-214ENST00000596788 ZP2Q05996 745 aa21.37■■□□□ 1.01
IRF3-214ENST00000596788 POLD3Q15054 466 aaPredicted RBP21.37■■□□□ 1.01
IRF3-214ENST00000596788 OASLQ15646 514 aaKnown RBP21.37■■□□□ 1.01
IRF3-214ENST00000596788 RNF219Q5W0B1 726 aaPredicted RBP21.37■■□□□ 1.01
IRF3-214ENST00000596788 TTC27Q6P3X3 843 aa21.37■■□□□ 1.01
IRF3-214ENST00000596788 ZNF783Q6ZMS7 281 aa21.37■■□□□ 1.01
IRF3-214ENST00000596788 ADHFE1Q8IWW8 467 aa21.37■■□□□ 1.01
IRF3-214ENST00000596788 ETFBKMTQ8IXQ9 262 aa21.37■■□□□ 1.01
IRF3-214ENST00000596788 SLC44A3Q8N4M1 653 aa21.37■■□□□ 1.01
IRF3-214ENST00000596788 CEP112Q8N8E3 955 aa21.37■■□□□ 1.01
IRF3-214ENST00000596788 NAT16Q8N8M0 369 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms