RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 PIGHQ14442 188 aaPredicted RBP18.76■□□□□ 0.59
ZNF558-204ENST00000596172 FNDC3BQ53EP0 1204 aaKnown RBP18.76■□□□□ 0.59
ZNF558-204ENST00000596172 USP39Q53GS9 565 aaKnown RBP18.76■□□□□ 0.59
ZNF558-204ENST00000596172 C6orf118Q5T5N4 469 aa18.76■□□□□ 0.59
ZNF558-204ENST00000596172 FAM72AQ5TYM5 149 aa18.76■□□□□ 0.59
ZNF558-204ENST00000596172 FAM72DQ6L9T8 149 aa18.76■□□□□ 0.59
ZNF558-204ENST00000596172 H2AFVQ71UI9 128 aa18.76■□□□□ 0.59
ZNF558-204ENST00000596172 FAM72BQ86X60 149 aa18.76■□□□□ 0.59
ZNF558-204ENST00000596172 NIPA2Q8N8Q9 360 aa18.76■□□□□ 0.59
ZNF558-204ENST00000596172 OR52K2Q8NGK3 314 aa18.76■□□□□ 0.59
ZNF558-204ENST00000596172 MYO19Q96H55 970 aa18.76■□□□□ 0.59
ZNF558-204ENST00000596172 MRGPRX3Q96LB0 322 aa18.76■□□□□ 0.59
ZNF558-204ENST00000596172 NUP85Q9BW27 656 aa18.76■□□□□ 0.59
ZNF558-204ENST00000596172 UVRAGQ9P2Y5 699 aa18.76■□□□□ 0.59
ZNF558-204ENST00000596172 SUN2Q9UH99 717 aa18.76■□□□□ 0.59
ZNF558-204ENST00000596172 ERVW-1Q9UQF0 538 aa18.76■□□□□ 0.59
ZNF558-204ENST00000596172 MYO18AQ92614 2054 aaKnown RBP18.76■□□□□ 0.59
ZNF558-204ENST00000596172 FANCMQ8IYD8 2048 aa18.76■□□□□ 0.59
ZNF558-204ENST00000596172 ZFHX2Q9C0A1 2572 aaPredicted RBP18.75■□□□□ 0.59
ZNF558-204ENST00000596172 ILVBLA1L0T0 632 aa18.75■□□□□ 0.59
ZNF558-204ENST00000596172 LRCH4O75427 683 aa18.75■□□□□ 0.59
ZNF558-204ENST00000596172 RPP40O75818 363 aaKnown RBP18.75■□□□□ 0.59
ZNF558-204ENST00000596172 EPHX1P07099 455 aa18.75■□□□□ 0.59
ZNF558-204ENST00000596172 RHOCP08134 193 aa18.75■□□□□ 0.59
ZNF558-204ENST00000596172 TMEM253P0C7T8 217 aa18.75■□□□□ 0.59
ZNF558-204ENST00000596172 GABRG2P18507 467 aa18.75■□□□□ 0.59
ZNF558-204ENST00000596172 OR1E1P30953 314 aa18.75■□□□□ 0.59
ZNF558-204ENST00000596172 HTR7P34969 479 aa18.75■□□□□ 0.59
ZNF558-204ENST00000596172 ST8SIA6P61647 398 aa18.75■□□□□ 0.59
ZNF558-204ENST00000596172 SEMA3BQ13214 749 aa18.75■□□□□ 0.59
ZNF558-204ENST00000596172 BYSLQ13895 437 aaKnown RBP18.75■□□□□ 0.59
ZNF558-204ENST00000596172 ERMARDQ5T6L9 678 aa18.75■□□□□ 0.59
ZNF558-204ENST00000596172 RNF219Q5W0B1 726 aaPredicted RBP18.75■□□□□ 0.59
ZNF558-204ENST00000596172 METTL3Q86U44 580 aaKnown RBP18.75■□□□□ 0.59
ZNF558-204ENST00000596172 NLRP14Q86W24 1093 aa18.75■□□□□ 0.59
ZNF558-204ENST00000596172 HMGB4Q8WW32 186 aa18.75■□□□□ 0.59
ZNF558-204ENST00000596172 CTNNBL1Q8WYA6 563 aaPredicted RBP18.75■□□□□ 0.59
ZNF558-204ENST00000596172 TBC1D31Q96DN5 1066 aa18.75■□□□□ 0.59
ZNF558-204ENST00000596172 ARHGEF26Q96DR7 871 aa18.75■□□□□ 0.59
ZNF558-204ENST00000596172 PANX2Q96RD6 677 aa18.75■□□□□ 0.59
ZNF558-204ENST00000596172 MAGEB5Q9BZ81 275 aa18.75■□□□□ 0.59
ZNF558-204ENST00000596172 FBRSQ9HAH7 460 aa18.75■□□□□ 0.59
ZNF558-204ENST00000596172 IP6K2Q9UHH9 426 aa18.75■□□□□ 0.59
ZNF558-204ENST00000596172 LCMT1Q9UIC8 334 aa18.75■□□□□ 0.59
ZNF558-204ENST00000596172 NEU3Q9UQ49 428 aa18.75■□□□□ 0.59
ZNF558-204ENST00000596172 RAD54BQ9Y620 910 aa18.75■□□□□ 0.59
ZNF558-204ENST00000596172 PIEZO1Q92508 2521 aa18.75■□□□□ 0.59
ZNF558-204ENST00000596172 PRR23AA6NEV1 266 aa18.74■□□□□ 0.59
ZNF558-204ENST00000596172 MYO1FO00160 1098 aa18.74■□□□□ 0.59
ZNF558-204ENST00000596172 PRPSAP2O60256 369 aa18.74■□□□□ 0.59
ZNF558-204ENST00000596172 MIPP30301 263 aa18.74■□□□□ 0.59
ZNF558-204ENST00000596172 CDC25BP30305 580 aa18.74■□□□□ 0.59
ZNF558-204ENST00000596172 MAPKAPK2P49137 400 aa18.74■□□□□ 0.59
ZNF558-204ENST00000596172 SIM2Q14190 667 aaPredicted RBP18.74■□□□□ 0.59
ZNF558-204ENST00000596172 TFAP2DQ7Z6R9 452 aa18.74■□□□□ 0.59
ZNF558-204ENST00000596172 C11orf74Q86VG3 221 aa18.74■□□□□ 0.59
ZNF558-204ENST00000596172 CCDC170Q8IYT3 715 aa18.74■□□□□ 0.59
ZNF558-204ENST00000596172 ZC3H10Q96K80 434 aaKnown RBP18.74■□□□□ 0.59
ZNF558-204ENST00000596172 MRGPRX1Q96LB2 322 aa18.74■□□□□ 0.59
ZNF558-204ENST00000596172 EPAS1Q99814 870 aa18.74■□□□□ 0.59
ZNF558-204ENST00000596172 TMEM248Q9NWD8 314 aa18.74■□□□□ 0.59
ZNF558-204ENST00000596172 BCCIPQ9P287 314 aaKnown RBP eCLIP18.74■□□□□ 0.59
ZNF558-204ENST00000596172 ANAPC7Q9UJX3 599 aa18.74■□□□□ 0.59
ZNF558-204ENST00000596172 VPS28Q9UK41 221 aa18.74■□□□□ 0.59
ZNF558-204ENST00000596172 INTUQ9ULD6 942 aa18.74■□□□□ 0.59
ZNF558-204ENST00000596172 CXorf51AA0A1B0GTR3 108 aa18.73■□□□□ 0.59
ZNF558-204ENST00000596172 NDUFV2P19404 249 aa18.73■□□□□ 0.59
ZNF558-204ENST00000596172 FECHP22830 423 aa18.73■□□□□ 0.59
ZNF558-204ENST00000596172 NNMTP40261 264 aa18.73■□□□□ 0.59
ZNF558-204ENST00000596172 P2RY2P41231 377 aa18.73■□□□□ 0.59
ZNF558-204ENST00000596172 CTSOP43234 321 aaPredicted RBP18.73■□□□□ 0.59
ZNF558-204ENST00000596172 ZNF135P52742 658 aaPredicted RBP18.73■□□□□ 0.59
ZNF558-204ENST00000596172 KRT83P78385 493 aa18.73■□□□□ 0.59
ZNF558-204ENST00000596172 SRSF5Q13243 272 aaKnown RBP18.73■□□□□ 0.59
ZNF558-204ENST00000596172 HNRNPA1L2Q32P51 320 aaKnown RBP18.73■□□□□ 0.59
ZNF558-204ENST00000596172 BOLA3Q53S33 107 aa18.73■□□□□ 0.59
ZNF558-204ENST00000596172 RWDD4Q6NW29 188 aaKnown RBP18.73■□□□□ 0.59
ZNF558-204ENST00000596172 CYP4V2Q6ZWL3 525 aaPredicted RBP18.73■□□□□ 0.59
ZNF558-204ENST00000596172 ASCL5Q7RTU5 278 aa18.73■□□□□ 0.59
ZNF558-204ENST00000596172 PYROXD2Q8N2H3 581 aa18.73■□□□□ 0.59
ZNF558-204ENST00000596172 PGBD3Q8N328 593 aa18.73■□□□□ 0.59
ZNF558-204ENST00000596172 OR2T3Q8NH03 318 aa18.73■□□□□ 0.59
ZNF558-204ENST00000596172 C2orf49Q9BVC5 232 aaPredicted RBP18.73■□□□□ 0.59
ZNF558-204ENST00000596172 PACSIN1Q9BY11 444 aa18.73■□□□□ 0.59
ZNF558-204ENST00000596172 TPSD1Q9BZJ3 242 aa18.73■□□□□ 0.59
ZNF558-204ENST00000596172 MUC3BQ9H195 1237 aa18.73■□□□□ 0.59
ZNF558-204ENST00000596172 PRSS16Q9NQE7 514 aa18.73■□□□□ 0.59
ZNF558-204ENST00000596172 SPTLC3Q9NUV7 552 aa18.73■□□□□ 0.59
ZNF558-204ENST00000596172 PCSK1NQ9UHG2 260 aa18.73■□□□□ 0.59
ZNF558-204ENST00000596172 SLCO3A1Q9UIG8 710 aa18.73■□□□□ 0.59
ZNF558-204ENST00000596172 USP18Q9UMW8 372 aa18.73■□□□□ 0.59
ZNF558-204ENST00000596172 AP4E1Q9UPM8 1137 aa18.73■□□□□ 0.59
ZNF558-204ENST00000596172 TARSL2A2RTX5 802 aaKnown RBP18.72■□□□□ 0.59
ZNF558-204ENST00000596172 WASH4PA8MWX3 477 aa18.72■□□□□ 0.59
ZNF558-204ENST00000596172 ZNF217O75362 1048 aa18.72■□□□□ 0.59
ZNF558-204ENST00000596172 LCA5LO95447 670 aa18.72■□□□□ 0.59
ZNF558-204ENST00000596172 HLA-EP13747 358 aa18.72■□□□□ 0.59
ZNF558-204ENST00000596172 ETFBP38117 255 aa18.72■□□□□ 0.59
ZNF558-204ENST00000596172 MRE11P49959 708 aa18.72■□□□□ 0.59
ZNF558-204ENST00000596172 COPAP53621 1224 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms