RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 OTOAQ7RTW8 1153 aa17.49■□□□□ 0.39
SHKBP1-205ENST00000594973 BNIPLQ7Z465 357 aa17.49■□□□□ 0.39
SHKBP1-205ENST00000594973 SPATA24Q86W54 205 aa17.49■□□□□ 0.39
SHKBP1-205ENST00000594973 OR10T2Q8NGX3 314 aa17.49■□□□□ 0.39
SHKBP1-205ENST00000594973 DTX3LQ8TDB6 740 aa17.49■□□□□ 0.39
SHKBP1-205ENST00000594973 TFB1MQ8WVM0 346 aaKnown RBP17.49■□□□□ 0.39
SHKBP1-205ENST00000594973 RSPH1Q8WYR4 309 aa17.49■□□□□ 0.39
SHKBP1-205ENST00000594973 PAFAH2Q99487 392 aa17.49■□□□□ 0.39
SHKBP1-205ENST00000594973 ACBD6Q9BR61 282 aa17.49■□□□□ 0.39
SHKBP1-205ENST00000594973 TRABDQ9H4I3 376 aa17.49■□□□□ 0.39
SHKBP1-205ENST00000594973 ACSS3Q9H6R3 686 aa17.49■□□□□ 0.39
SHKBP1-205ENST00000594973 ANLNQ9NQW6 1124 aa17.49■□□□□ 0.39
SHKBP1-205ENST00000594973 DDIT4Q9NX09 232 aa17.49■□□□□ 0.39
SHKBP1-205ENST00000594973 SLC24A2Q9UI40 661 aa17.49■□□□□ 0.39
SHKBP1-205ENST00000594973 A0A1W2PPM1 405 aa17.49■□□□□ 0.39
SHKBP1-205ENST00000594973 HHLA1C9JL84 531 aa17.49■□□□□ 0.39
SHKBP1-205ENST00000594973 FAM72CH0Y354 149 aa17.49■□□□□ 0.39
SHKBP1-205ENST00000594973 DNAJC6O75061 913 aa17.49■□□□□ 0.39
SHKBP1-205ENST00000594973 LTFP02788 710 aa17.49■□□□□ 0.39
SHKBP1-205ENST00000594973 NEK3P51956 506 aa17.49■□□□□ 0.39
SHKBP1-205ENST00000594973 IFRD2Q12894 506 aaPredicted RBP17.49■□□□□ 0.39
SHKBP1-205ENST00000594973 HNRNPDQ14103 355 aaKnown RBP17.49■□□□□ 0.39
SHKBP1-205ENST00000594973 INTS6LQ5JSJ4 861 aaKnown RBP17.49■□□□□ 0.39
SHKBP1-205ENST00000594973 MAP3K21Q5TCX8 1036 aa17.49■□□□□ 0.39
SHKBP1-205ENST00000594973 FAM72AQ5TYM5 149 aa17.49■□□□□ 0.39
SHKBP1-205ENST00000594973 FAM72DQ6L9T8 149 aa17.49■□□□□ 0.39
SHKBP1-205ENST00000594973 KLC3Q6P597 504 aa17.49■□□□□ 0.39
SHKBP1-205ENST00000594973 ACAD11Q709F0 780 aa17.49■□□□□ 0.39
SHKBP1-205ENST00000594973 LRRTM3Q86VH5 581 aa17.49■□□□□ 0.39
SHKBP1-205ENST00000594973 FAM72BQ86X60 149 aa17.49■□□□□ 0.39
SHKBP1-205ENST00000594973 SPOCK2Q92563 424 aa17.49■□□□□ 0.39
SHKBP1-205ENST00000594973 CFAP36Q96G28 342 aa17.49■□□□□ 0.39
SHKBP1-205ENST00000594973 CEP41Q9BYV8 373 aa17.49■□□□□ 0.39
SHKBP1-205ENST00000594973 HSFX1Q9UBD0 423 aa17.49■□□□□ 0.39
SHKBP1-205ENST00000594973 TEX264Q9Y6I9 313 aa17.49■□□□□ 0.39
SHKBP1-205ENST00000594973 H3BRJ5 948 aa17.48■□□□□ 0.39
SHKBP1-205ENST00000594973 EEF2KO00418 725 aaKnown RBP17.48■□□□□ 0.39
SHKBP1-205ENST00000594973 CAPN15O75808 1086 aa17.48■□□□□ 0.39
SHKBP1-205ENST00000594973 CCNYQ8ND76 341 aa17.48■□□□□ 0.39
SHKBP1-205ENST00000594973 WDR60Q8WVS4 1066 aa17.48■□□□□ 0.39
SHKBP1-205ENST00000594973 HTR3CQ8WXA8 447 aa17.48■□□□□ 0.39
SHKBP1-205ENST00000594973 PTTG2Q9NZH5 202 aa17.48■□□□□ 0.39
SHKBP1-205ENST00000594973 TCRBV9S1A1TA0A576 114 aa17.48■□□□□ 0.39
SHKBP1-205ENST00000594973 I6L893 689 aaPredicted RBP17.48■□□□□ 0.39
SHKBP1-205ENST00000594973 B4GALT3O60512 393 aa17.48■□□□□ 0.39
SHKBP1-205ENST00000594973 GCATO75600 419 aa17.48■□□□□ 0.39
SHKBP1-205ENST00000594973 CABYRO75952 493 aa17.48■□□□□ 0.39
SHKBP1-205ENST00000594973 ADRA1BP35368 520 aa17.48■□□□□ 0.39
SHKBP1-205ENST00000594973 MBTPS1Q14703 1052 aa17.48■□□□□ 0.39
SHKBP1-205ENST00000594973 KLHL38Q2WGJ6 581 aa17.48■□□□□ 0.39
SHKBP1-205ENST00000594973 FAM26DQ5JW98 314 aa17.48■□□□□ 0.39
SHKBP1-205ENST00000594973 IZUMO2Q6UXV1 221 aa17.48■□□□□ 0.39
SHKBP1-205ENST00000594973 DENND5BQ6ZUT9 1274 aa17.48■□□□□ 0.39
SHKBP1-205ENST00000594973 RFX8Q6ZV50 586 aa17.48■□□□□ 0.39
SHKBP1-205ENST00000594973 ZNF598Q86UK7 904 aaKnown RBP17.48■□□□□ 0.39
SHKBP1-205ENST00000594973 RTN4RL1Q86UN2 441 aaPredicted RBP17.48■□□□□ 0.39
SHKBP1-205ENST00000594973 CAND1Q86VP6 1230 aaKnown RBP17.48■□□□□ 0.39
SHKBP1-205ENST00000594973 ZNF280BQ86YH2 543 aa17.48■□□□□ 0.39
SHKBP1-205ENST00000594973 PSTKQ8IV42 348 aaKnown RBP17.48■□□□□ 0.39
SHKBP1-205ENST00000594973 TP53INP2Q8IXH6 220 aa17.48■□□□□ 0.39
SHKBP1-205ENST00000594973 LRRC43Q8N309 656 aa17.48■□□□□ 0.39
SHKBP1-205ENST00000594973 CATSPER2Q96P56 530 aa17.48■□□□□ 0.39
SHKBP1-205ENST00000594973 SMC6Q96SB8 1091 aa17.48■□□□□ 0.39
SHKBP1-205ENST00000594973 WDR6Q9NNW5 1121 aaKnown RBP17.48■□□□□ 0.39
SHKBP1-205ENST00000594973 SEPT10Q9P0V9 454 aa17.48■□□□□ 0.39
SHKBP1-205ENST00000594973 RCOR3Q9P2K3 495 aaPredicted RBP17.48■□□□□ 0.39
SHKBP1-205ENST00000594973 HNRNPRO43390 633 aaKnown RBP17.47■□□□□ 0.39
SHKBP1-205ENST00000594973 MAGEC1O60732 1142 aa17.47■□□□□ 0.39
SHKBP1-205ENST00000594973 CD151P48509 253 aa17.47■□□□□ 0.39
SHKBP1-205ENST00000594973 DEFB115Q30KQ5 88 aa17.47■□□□□ 0.39
SHKBP1-205ENST00000594973 FAM171BQ6P995 826 aa17.47■□□□□ 0.39
SHKBP1-205ENST00000594973 PDCD7Q8N8D1 485 aaKnown RBP17.47■□□□□ 0.39
SHKBP1-205ENST00000594973 CSNK1G1Q9HCP0 422 aa17.47■□□□□ 0.39
SHKBP1-205ENST00000594973 ARL8BQ9NVJ2 186 aa17.47■□□□□ 0.39
SHKBP1-205ENST00000594973 THSD7BQ9C0I4 1608 aa17.47■□□□□ 0.39
SHKBP1-205ENST00000594973 CASP8AP2Q9UKL3 1982 aa17.47■□□□□ 0.39
SHKBP1-205ENST00000594973 M0QZQ0 153 aa17.47■□□□□ 0.39
SHKBP1-205ENST00000594973 DGKIO75912 1065 aa17.47■□□□□ 0.39
SHKBP1-205ENST00000594973 CYP11A1P05108 521 aa17.47■□□□□ 0.39
SHKBP1-205ENST00000594973 SPATA31D3P0C874 917 aa17.47■□□□□ 0.39
SHKBP1-205ENST00000594973 ANPEPP15144 967 aa17.47■□□□□ 0.39
SHKBP1-205ENST00000594973 KRT4P19013 534 aa17.47■□□□□ 0.39
SHKBP1-205ENST00000594973 HOXD10P28358 340 aa17.47■□□□□ 0.39
SHKBP1-205ENST00000594973 CCNFP41002 786 aa17.47■□□□□ 0.39
SHKBP1-205ENST00000594973 THOC5Q13769 683 aaKnown RBP17.47■□□□□ 0.39
SHKBP1-205ENST00000594973 GRM2Q14416 872 aa17.47■□□□□ 0.39
SHKBP1-205ENST00000594973 KBTBD12Q3ZCT8 623 aa17.47■□□□□ 0.39
SHKBP1-205ENST00000594973 SPATA31D4Q6ZUB0 917 aa17.47■□□□□ 0.39
SHKBP1-205ENST00000594973 BHLHA9Q7RTU4 235 aa17.47■□□□□ 0.39
SHKBP1-205ENST00000594973 SCAMP5Q8TAC9 235 aa17.47■□□□□ 0.39
SHKBP1-205ENST00000594973 ZNF75CPQ92670 426 aaPredicted RBP17.47■□□□□ 0.39
SHKBP1-205ENST00000594973 ZDHHC7Q9NXF8 308 aa17.47■□□□□ 0.39
SHKBP1-205ENST00000594973 GRIA1P42261 906 aa17.46■□□□□ 0.39
SHKBP1-205ENST00000594973 GLB1LQ6UWU2 654 aa17.46■□□□□ 0.39
SHKBP1-205ENST00000594973 RNF168Q8IYW5 571 aaPredicted RBP17.46■□□□□ 0.39
SHKBP1-205ENST00000594973 PIP4K2CQ8TBX8 421 aa17.46■□□□□ 0.39
SHKBP1-205ENST00000594973 CYTH2Q99418 400 aa17.46■□□□□ 0.39
SHKBP1-205ENST00000594973 TRIM56Q9BRZ2 755 aaKnown RBP17.46■□□□□ 0.39
SHKBP1-205ENST00000594973 PPCSQ9HAB8 311 aa17.46■□□□□ 0.39
SHKBP1-205ENST00000594973 TAS2R1Q9NYW7 299 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms