RNA–Protein interactions for RNA: ENST00000594243.1

UPF1-202, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-202ENST00000594243 NUP85Q9BW27 656 aa15.45■□□□□ 0.06
UPF1-202ENST00000594243 TPSD1Q9BZJ3 242 aa15.45■□□□□ 0.06
UPF1-202ENST00000594243 MUC3BQ9H195 1237 aa15.45■□□□□ 0.06
UPF1-202ENST00000594243 IP6K2Q9UHH9 426 aa15.45■□□□□ 0.06
UPF1-202ENST00000594243 ERVW-1Q9UQF0 538 aa15.45■□□□□ 0.06
UPF1-202ENST00000594243 EIF3CLB5ME19 914 aaKnown RBP15.44■□□□□ 0.06
UPF1-202ENST00000594243 MYO1FO00160 1098 aa15.44■□□□□ 0.06
UPF1-202ENST00000594243 PRPSAP2O60256 369 aa15.44■□□□□ 0.06
UPF1-202ENST00000594243 LRIG2O94898 1065 aa15.44■□□□□ 0.06
UPF1-202ENST00000594243 RHOCP08134 193 aa15.44■□□□□ 0.06
UPF1-202ENST00000594243 RHOQP17081 205 aa15.44■□□□□ 0.06
UPF1-202ENST00000594243 GABRG2P18507 467 aa15.44■□□□□ 0.06
UPF1-202ENST00000594243 PRKCHP24723 683 aa15.44■□□□□ 0.06
UPF1-202ENST00000594243 ZNF252P-AS1Q0IIN9 211 aa15.44■□□□□ 0.06
UPF1-202ENST00000594243 MANEALQ5VSG8 457 aa15.44■□□□□ 0.06
UPF1-202ENST00000594243 KIAA1211LQ6NV74 962 aa15.44■□□□□ 0.06
UPF1-202ENST00000594243 RWDD4Q6NW29 188 aaKnown RBP15.44■□□□□ 0.06
UPF1-202ENST00000594243 ZNF783Q6ZMS7 281 aa15.44■□□□□ 0.06
UPF1-202ENST00000594243 PRR23BQ6ZRT6 265 aa15.44■□□□□ 0.06
UPF1-202ENST00000594243 TFAP2DQ7Z6R9 452 aa15.44■□□□□ 0.06
UPF1-202ENST00000594243 C11orf74Q86VG3 221 aa15.44■□□□□ 0.06
UPF1-202ENST00000594243 SUMF1Q8NBK3 374 aa15.44■□□□□ 0.06
UPF1-202ENST00000594243 TBC1D31Q96DN5 1066 aa15.44■□□□□ 0.06
UPF1-202ENST00000594243 ALG14Q96F25 216 aa15.44■□□□□ 0.06
UPF1-202ENST00000594243 EIF3CQ99613 913 aaKnown RBP15.44■□□□□ 0.06
UPF1-202ENST00000594243 EPAS1Q99814 870 aa15.44■□□□□ 0.06
UPF1-202ENST00000594243 TRIM7Q9C029 511 aa15.44■□□□□ 0.06
UPF1-202ENST00000594243 CD248Q9HCU0 757 aa15.44■□□□□ 0.06
UPF1-202ENST00000594243 LCMT1Q9UIC8 334 aa15.44■□□□□ 0.06
UPF1-202ENST00000594243 ANAPC7Q9UJX3 599 aa15.44■□□□□ 0.06
UPF1-202ENST00000594243 VPS28Q9UK41 221 aa15.44■□□□□ 0.06
UPF1-202ENST00000594243 CACNA1IQ9P0X4 2223 aa15.43■□□□□ 0.06
UPF1-202ENST00000594243 ILVBLA1L0T0 632 aa15.43■□□□□ 0.06
UPF1-202ENST00000594243 PRR23AA6NEV1 266 aa15.43■□□□□ 0.06
UPF1-202ENST00000594243 FAM72CH0Y354 149 aa15.43■□□□□ 0.06
UPF1-202ENST00000594243 ZNF217O75362 1048 aa15.43■□□□□ 0.06
UPF1-202ENST00000594243 TMEM253P0C7T8 217 aa15.43■□□□□ 0.06
UPF1-202ENST00000594243 HTR7P34969 479 aa15.43■□□□□ 0.06
UPF1-202ENST00000594243 PCK1P35558 622 aa15.43■□□□□ 0.06
UPF1-202ENST00000594243 VASPP50552 380 aaPredicted RBP15.43■□□□□ 0.06
UPF1-202ENST00000594243 SRSF5Q13243 272 aaKnown RBP15.43■□□□□ 0.06
UPF1-202ENST00000594243 CAMK2GQ13555 558 aaPredicted RBP15.43■□□□□ 0.06
UPF1-202ENST00000594243 ARTNQ5T4W7 220 aa15.43■□□□□ 0.06
UPF1-202ENST00000594243 FAM72AQ5TYM5 149 aa15.43■□□□□ 0.06
UPF1-202ENST00000594243 FAM72DQ6L9T8 149 aa15.43■□□□□ 0.06
UPF1-202ENST00000594243 FAM72BQ86X60 149 aa15.43■□□□□ 0.06
UPF1-202ENST00000594243 PSTKQ8IV42 348 aaKnown RBP15.43■□□□□ 0.06
UPF1-202ENST00000594243 ARFGAP1Q8N6T3 406 aa15.43■□□□□ 0.06
UPF1-202ENST00000594243 OR52K2Q8NGK3 314 aa15.43■□□□□ 0.06
UPF1-202ENST00000594243 ARHGEF26Q96DR7 871 aa15.43■□□□□ 0.06
UPF1-202ENST00000594243 SPACA7Q96KW9 195 aa15.43■□□□□ 0.06
UPF1-202ENST00000594243 MRGPRX3Q96LB0 322 aa15.43■□□□□ 0.06
UPF1-202ENST00000594243 MRGPRX1Q96LB2 322 aa15.43■□□□□ 0.06
UPF1-202ENST00000594243 C2orf49Q9BVC5 232 aaPredicted RBP15.43■□□□□ 0.06
UPF1-202ENST00000594243 MAGEB5Q9BZ81 275 aa15.43■□□□□ 0.06
UPF1-202ENST00000594243 FBRSQ9HAH7 460 aa15.43■□□□□ 0.06
UPF1-202ENST00000594243 PRDM16Q9HAZ2 1276 aa15.43■□□□□ 0.06
UPF1-202ENST00000594243 TMEM248Q9NWD8 314 aa15.43■□□□□ 0.06
UPF1-202ENST00000594243 DONSONQ9NYP3 566 aa15.43■□□□□ 0.06
UPF1-202ENST00000594243 CTTNBP2NLQ9P2B4 639 aa15.43■□□□□ 0.06
UPF1-202ENST00000594243 UVRAGQ9P2Y5 699 aa15.43■□□□□ 0.06
UPF1-202ENST00000594243 PCSK1NQ9UHG2 260 aa15.43■□□□□ 0.06
UPF1-202ENST00000594243 SLC25A13Q9UJS0 675 aa15.43■□□□□ 0.06
UPF1-202ENST00000594243 USP18Q9UMW8 372 aa15.43■□□□□ 0.06
UPF1-202ENST00000594243 OR51B4Q9Y5P0 310 aa15.43■□□□□ 0.06
UPF1-202ENST00000594243 ATG2BQ96BY7 2078 aa15.42■□□□□ 0.06
UPF1-202ENST00000594243 TARSL2A2RTX5 802 aaKnown RBP15.42■□□□□ 0.06
UPF1-202ENST00000594243 CREB3O43889 395 aa15.42■□□□□ 0.06
UPF1-202ENST00000594243 LRCH4O75427 683 aa15.42■□□□□ 0.06
UPF1-202ENST00000594243 HLA-EP13747 358 aa15.42■□□□□ 0.06
UPF1-202ENST00000594243 NDUFV2P19404 249 aa15.42■□□□□ 0.06
UPF1-202ENST00000594243 EPHB2P29323 1055 aa15.42■□□□□ 0.06
UPF1-202ENST00000594243 MIPP30301 263 aa15.42■□□□□ 0.06
UPF1-202ENST00000594243 ETFBP38117 255 aa15.42■□□□□ 0.06
UPF1-202ENST00000594243 CTSOP43234 321 aaPredicted RBP15.42■□□□□ 0.06
UPF1-202ENST00000594243 MAPKAPK2P49137 400 aa15.42■□□□□ 0.06
UPF1-202ENST00000594243 BOLA3Q53S33 107 aa15.42■□□□□ 0.06
UPF1-202ENST00000594243 ASCL5Q7RTU5 278 aa15.42■□□□□ 0.06
UPF1-202ENST00000594243 METTL3Q86U44 580 aaKnown RBP15.42■□□□□ 0.06
UPF1-202ENST00000594243 TMPRSS6Q8IU80 811 aa15.42■□□□□ 0.06
UPF1-202ENST00000594243 CCDC170Q8IYT3 715 aa15.42■□□□□ 0.06
UPF1-202ENST00000594243 PYROXD2Q8N2H3 581 aa15.42■□□□□ 0.06
UPF1-202ENST00000594243 NIPA2Q8N8Q9 360 aa15.42■□□□□ 0.06
UPF1-202ENST00000594243 OR2T3Q8NH03 318 aa15.42■□□□□ 0.06
UPF1-202ENST00000594243 ZNF564Q8TBZ8 553 aaPredicted RBP15.42■□□□□ 0.06
UPF1-202ENST00000594243 PRCCQ92733 491 aaPredicted RBP15.42■□□□□ 0.06
UPF1-202ENST00000594243 MYO19Q96H55 970 aa15.42■□□□□ 0.06
UPF1-202ENST00000594243 ZC3H10Q96K80 434 aaKnown RBP15.42■□□□□ 0.06
UPF1-202ENST00000594243 RPL10LQ96L21 214 aaKnown RBP15.42■□□□□ 0.06
UPF1-202ENST00000594243 PANX2Q96RD6 677 aa15.42■□□□□ 0.06
UPF1-202ENST00000594243 CATSPERBQ9H7T0 1116 aa15.42■□□□□ 0.06
UPF1-202ENST00000594243 SPTLC3Q9NUV7 552 aa15.42■□□□□ 0.06
UPF1-202ENST00000594243 ZNF212Q9UDV6 495 aa15.42■□□□□ 0.06
UPF1-202ENST00000594243 AP4E1Q9UPM8 1137 aa15.42■□□□□ 0.06
UPF1-202ENST00000594243 SMG5Q9UPR3 1016 aaKnown RBP15.42■□□□□ 0.06
UPF1-202ENST00000594243 ZFHX2Q9C0A1 2572 aaPredicted RBP15.41■□□□□ 0.06
UPF1-202ENST00000594243 WDR87Q6ZQQ6 2873 aa15.41■□□□□ 0.06
UPF1-202ENST00000594243 GFRA3O60609 400 aa15.41■□□□□ 0.06
UPF1-202ENST00000594243 RHOBTB1O94844 696 aa15.41■□□□□ 0.06
UPF1-202ENST00000594243 ACADMP11310 421 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms