RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 MRFAP1L1Q96HT8 127 aa14.98□□□□□ -0.01
VRK3-206ENST00000594090 MRGPRX3Q96LB0 322 aa14.98□□□□□ -0.01
VRK3-206ENST00000594090 FEM1AQ9BSK4 669 aa14.98□□□□□ -0.01
VRK3-206ENST00000594090 MAGEB5Q9BZ81 275 aa14.98□□□□□ -0.01
VRK3-206ENST00000594090 DEF6Q9H4E7 631 aa14.98□□□□□ -0.01
VRK3-206ENST00000594090 PPARGC1AQ9UBK2 798 aaKnown RBP14.98□□□□□ -0.01
VRK3-206ENST00000594090 ZNF212Q9UDV6 495 aa14.98□□□□□ -0.01
VRK3-206ENST00000594090 RAB23Q9ULC3 237 aa14.98□□□□□ -0.01
VRK3-206ENST00000594090 NEU3Q9UQ49 428 aa14.98□□□□□ -0.01
VRK3-206ENST00000594090 ERVW-1Q9UQF0 538 aa14.98□□□□□ -0.01
VRK3-206ENST00000594090 PLXND1Q9Y4D7 1925 aa14.98□□□□□ -0.01
VRK3-206ENST00000594090 ZBTB24O43167 697 aaPredicted RBP14.97□□□□□ -0.01
VRK3-206ENST00000594090 RHOCP08134 193 aa14.97□□□□□ -0.01
VRK3-206ENST00000594090 SRPRAP08240 638 aaKnown RBP14.97□□□□□ -0.01
VRK3-206ENST00000594090 ST8SIA6P61647 398 aa14.97□□□□□ -0.01
VRK3-206ENST00000594090 ECT2LQ008S8 904 aa14.97□□□□□ -0.01
VRK3-206ENST00000594090 LPAL2Q16609 132 aa14.97□□□□□ -0.01
VRK3-206ENST00000594090 EFHC2Q5JST6 749 aa14.97□□□□□ -0.01
VRK3-206ENST00000594090 SETD3Q86TU7 594 aaPredicted RBP14.97□□□□□ -0.01
VRK3-206ENST00000594090 ARFGAP1Q8N6T3 406 aa14.97□□□□□ -0.01
VRK3-206ENST00000594090 MRGPRX1Q96LB2 322 aa14.97□□□□□ -0.01
VRK3-206ENST00000594090 CHP1Q99653 195 aa14.97□□□□□ -0.01
VRK3-206ENST00000594090 SLC6A17Q9H1V8 727 aa14.97□□□□□ -0.01
VRK3-206ENST00000594090 FZD10Q9ULW2 581 aa14.97□□□□□ -0.01
VRK3-206ENST00000594090 INVSQ9Y283 1065 aa14.97□□□□□ -0.01
VRK3-206ENST00000594090 OR51B4Q9Y5P0 310 aa14.97□□□□□ -0.01
VRK3-206ENST00000594090 NYNRINQ9P2P1 1898 aaKnown RBP14.96□□□□□ -0.01
VRK3-206ENST00000594090 DCLK1O15075 740 aa14.96□□□□□ -0.01
VRK3-206ENST00000594090 LRIG2O94898 1065 aa14.96□□□□□ -0.01
VRK3-206ENST00000594090 CYP1A2P05177 515 aa14.96□□□□□ -0.01
VRK3-206ENST00000594090 L1CAMP32004 1257 aa14.96□□□□□ -0.01
VRK3-206ENST00000594090 COPAP53621 1224 aa14.96□□□□□ -0.01
VRK3-206ENST00000594090 GALCP54803 685 aa14.96□□□□□ -0.01
VRK3-206ENST00000594090 SULT2A1Q06520 285 aa14.96□□□□□ -0.01
VRK3-206ENST00000594090 CAMK2GQ13555 558 aaPredicted RBP14.96□□□□□ -0.01
VRK3-206ENST00000594090 C6orf118Q5T5N4 469 aa14.96□□□□□ -0.01
VRK3-206ENST00000594090 RNF219Q5W0B1 726 aaPredicted RBP14.96□□□□□ -0.01
VRK3-206ENST00000594090 RWDD4Q6NW29 188 aaKnown RBP14.96□□□□□ -0.01
VRK3-206ENST00000594090 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.96□□□□□ -0.01
VRK3-206ENST00000594090 KBTBD6Q86V97 674 aa14.96□□□□□ -0.01
VRK3-206ENST00000594090 PYROXD2Q8N2H3 581 aa14.96□□□□□ -0.01
VRK3-206ENST00000594090 FAM160A2Q8N612 972 aaPredicted RBP14.96□□□□□ -0.01
VRK3-206ENST00000594090 TC2NQ8N9U0 490 aa14.96□□□□□ -0.01
VRK3-206ENST00000594090 KDM1BQ8NB78 822 aa14.96□□□□□ -0.01
VRK3-206ENST00000594090 RLN3Q8WXF3 142 aa14.96□□□□□ -0.01
VRK3-206ENST00000594090 TBC1D31Q96DN5 1066 aa14.96□□□□□ -0.01
VRK3-206ENST00000594090 ARHGEF26Q96DR7 871 aa14.96□□□□□ -0.01
VRK3-206ENST00000594090 SPACA7Q96KW9 195 aa14.96□□□□□ -0.01
VRK3-206ENST00000594090 PPP1R9BQ96SB3 815 aa14.96□□□□□ -0.01
VRK3-206ENST00000594090 NUP85Q9BW27 656 aa14.96□□□□□ -0.01
VRK3-206ENST00000594090 MKRN2Q9H000 416 aaKnown RBP14.96□□□□□ -0.01
VRK3-206ENST00000594090 MUC3BQ9H195 1237 aa14.96□□□□□ -0.01
VRK3-206ENST00000594090 NHEJ1Q9H9Q4 299 aaPredicted RBP14.96□□□□□ -0.01
VRK3-206ENST00000594090 VPS28Q9UK41 221 aa14.96□□□□□ -0.01
VRK3-206ENST00000594090 AKR1B10O60218 316 aa14.95□□□□□ -0.02
VRK3-206ENST00000594090 LRCH4O75427 683 aa14.95□□□□□ -0.02
VRK3-206ENST00000594090 RNF8O76064 485 aa14.95□□□□□ -0.02
VRK3-206ENST00000594090 BCKDHBP21953 392 aa14.95□□□□□ -0.02
VRK3-206ENST00000594090 OR1E1P30953 314 aa14.95□□□□□ -0.02
VRK3-206ENST00000594090 P2RY2P41231 377 aa14.95□□□□□ -0.02
VRK3-206ENST00000594090 STK19P49842 368 aaPredicted RBP14.95□□□□□ -0.02
VRK3-206ENST00000594090 HNRNPA1L2Q32P51 320 aaKnown RBP14.95□□□□□ -0.02
VRK3-206ENST00000594090 MAP7D1Q3KQU3 841 aa14.95□□□□□ -0.02
VRK3-206ENST00000594090 LAIR1Q6GTX8 287 aa14.95□□□□□ -0.02
VRK3-206ENST00000594090 KIAA1324Q6UXG2 1013 aaKnown RBP14.95□□□□□ -0.02
VRK3-206ENST00000594090 C11orf74Q86VG3 221 aa14.95□□□□□ -0.02
VRK3-206ENST00000594090 NLRP14Q86W24 1093 aa14.95□□□□□ -0.02
VRK3-206ENST00000594090 OR2T3Q8NH03 318 aa14.95□□□□□ -0.02
VRK3-206ENST00000594090 ZC3H10Q96K80 434 aaKnown RBP14.95□□□□□ -0.02
VRK3-206ENST00000594090 RPL10LQ96L21 214 aaKnown RBP14.95□□□□□ -0.02
VRK3-206ENST00000594090 PEBP4Q96S96 227 aa14.95□□□□□ -0.02
VRK3-206ENST00000594090 PSMB7Q99436 277 aa14.95□□□□□ -0.02
VRK3-206ENST00000594090 ANP32EQ9BTT0 268 aa14.95□□□□□ -0.02
VRK3-206ENST00000594090 PACSIN1Q9BY11 444 aa14.95□□□□□ -0.02
VRK3-206ENST00000594090 ANAPC7Q9UJX3 599 aa14.95□□□□□ -0.02
VRK3-206ENST00000594090 A0A0D9SEW6 157 aa14.94□□□□□ -0.02
VRK3-206ENST00000594090 RHOQP17081 205 aa14.94□□□□□ -0.02
VRK3-206ENST00000594090 MIPP30301 263 aa14.94□□□□□ -0.02
VRK3-206ENST00000594090 MAPKAPK2P49137 400 aa14.94□□□□□ -0.02
VRK3-206ENST00000594090 SEMA3BQ13214 749 aa14.94□□□□□ -0.02
VRK3-206ENST00000594090 BYSLQ13895 437 aaKnown RBP14.94□□□□□ -0.02
VRK3-206ENST00000594090 ACAP1Q15027 740 aa14.94□□□□□ -0.02
VRK3-206ENST00000594090 PLK5Q496M5 336 aa14.94□□□□□ -0.02
VRK3-206ENST00000594090 DAB2IPQ5VWQ8 1189 aa14.94□□□□□ -0.02
VRK3-206ENST00000594090 ZNF783Q6ZMS7 281 aa14.94□□□□□ -0.02
VRK3-206ENST00000594090 CYP4V2Q6ZWL3 525 aaPredicted RBP14.94□□□□□ -0.02
VRK3-206ENST00000594090 TMPRSS6Q8IU80 811 aa14.94□□□□□ -0.02
VRK3-206ENST00000594090 DCAF4L2Q8NA75 395 aa14.94□□□□□ -0.02
VRK3-206ENST00000594090 RUBCNQ92622 972 aa14.94□□□□□ -0.02
VRK3-206ENST00000594090 CCDC42Q96M95 316 aa14.94□□□□□ -0.02
VRK3-206ENST00000594090 EPAS1Q99814 870 aa14.94□□□□□ -0.02
VRK3-206ENST00000594090 NCAPGQ9BPX3 1015 aa14.94□□□□□ -0.02
VRK3-206ENST00000594090 SNRNP25Q9BV90 132 aaKnown RBP14.94□□□□□ -0.02
VRK3-206ENST00000594090 MTG2Q9H4K7 406 aa14.94□□□□□ -0.02
VRK3-206ENST00000594090 RETREG1Q9H6L5 497 aa14.94□□□□□ -0.02
VRK3-206ENST00000594090 FBRSQ9HAH7 460 aa14.94□□□□□ -0.02
VRK3-206ENST00000594090 PRDM16Q9HAZ2 1276 aa14.94□□□□□ -0.02
VRK3-206ENST00000594090 CD93Q9NPY3 652 aa14.94□□□□□ -0.02
VRK3-206ENST00000594090 PRSS16Q9NQE7 514 aa14.94□□□□□ -0.02
VRK3-206ENST00000594090 SPTLC3Q9NUV7 552 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms