RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	SND1	Q7KZF4	910 aa	Known RBP eCLIP	18.9	■□□□□ 0.62
CIRBP-238	ENST00000592412	OR14C36	Q8NHC7	312 aa		18.9	■□□□□ 0.62
CIRBP-238	ENST00000592412	LMO3	Q8TAP4	145 aa		18.9	■□□□□ 0.62
CIRBP-238	ENST00000592412	SKA1	Q96BD8	255 aa		18.9	■□□□□ 0.62
CIRBP-238	ENST00000592412	SERAC1	Q96JX3	654 aa		18.9	■□□□□ 0.62
CIRBP-238	ENST00000592412	ARMCX3	Q9UH62	379 aa	Predicted RBP	18.9	■□□□□ 0.62
CIRBP-238	ENST00000592412	TYW5	A2RUC4	315 aa	Known RBP	18.89	■□□□□ 0.61
CIRBP-238	ENST00000592412	EIF4E1B	A6NMX2	242 aa	Known RBP	18.89	■□□□□ 0.61
CIRBP-238	ENST00000592412	YKT6	O15498	198 aa		18.89	■□□□□ 0.61
CIRBP-238	ENST00000592412	ADH1B	P00325	375 aa		18.89	■□□□□ 0.61
CIRBP-238	ENST00000592412	C5AR1	P21730	350 aa		18.89	■□□□□ 0.61
CIRBP-238	ENST00000592412	SFSWAP	Q12872	951 aa	Known RBP	18.89	■□□□□ 0.61
CIRBP-238	ENST00000592412	ZNF658	Q5TYW1	1059 aa	Predicted RBP	18.89	■□□□□ 0.61
CIRBP-238	ENST00000592412	RAP1GAP2	Q684P5	730 aa		18.89	■□□□□ 0.61
CIRBP-238	ENST00000592412	LGI2	Q8N0V4	545 aa		18.89	■□□□□ 0.61
CIRBP-238	ENST00000592412	FRS2	Q8WU20	508 aa		18.89	■□□□□ 0.61
CIRBP-238	ENST00000592412	DDX50	Q9BQ39	737 aa	Known RBP	18.89	■□□□□ 0.61
CIRBP-238	ENST00000592412	ERVMER34-1	Q9H9K5	563 aa		18.89	■□□□□ 0.61
CIRBP-238	ENST00000592412	SHROOM3	Q8TF72	1996 aa		18.89	■□□□□ 0.61
CIRBP-238	ENST00000592412	IGLV3-25	P01717	112 aa		18.88	■□□□□ 0.61
CIRBP-238	ENST00000592412	CDK4	P11802	303 aa		18.88	■□□□□ 0.61
CIRBP-238	ENST00000592412	TACR2	P21452	398 aa		18.88	■□□□□ 0.61
CIRBP-238	ENST00000592412	GPD2	P43304	727 aa		18.88	■□□□□ 0.61
CIRBP-238	ENST00000592412	ARRB1	P49407	418 aa	Predicted RBP	18.88	■□□□□ 0.61
CIRBP-238	ENST00000592412	PITX1	P78337	314 aa	Predicted RBP	18.88	■□□□□ 0.61
CIRBP-238	ENST00000592412	EIF4EBP2	Q13542	120 aa	Predicted RBP	18.88	■□□□□ 0.61
CIRBP-238	ENST00000592412	STIL	Q15468	1287 aa		18.88	■□□□□ 0.61
CIRBP-238	ENST00000592412	NAPEPLD	Q6IQ20	393 aa		18.88	■□□□□ 0.61
CIRBP-238	ENST00000592412	CIR1	Q86X95	450 aa	Predicted RBP	18.88	■□□□□ 0.61
CIRBP-238	ENST00000592412	ARHGEF19	Q8IW93	802 aa		18.88	■□□□□ 0.61
CIRBP-238	ENST00000592412	ERCC4	Q92889	916 aa	Predicted RBP	18.88	■□□□□ 0.61
CIRBP-238	ENST00000592412	TSG101	Q99816	390 aa		18.88	■□□□□ 0.61
CIRBP-238	ENST00000592412	NRSN2	Q9GZP1	204 aa		18.88	■□□□□ 0.61
CIRBP-238	ENST00000592412	GDPD2	Q9HCC8	539 aa		18.88	■□□□□ 0.61
CIRBP-238	ENST00000592412	SARDH	Q9UL12	918 aa		18.88	■□□□□ 0.61
CIRBP-238	ENST00000592412	TBC1D3D	A0A087WVF3	549 aa		18.87	■□□□□ 0.61
CIRBP-238	ENST00000592412	TBC1D3I	A0A087WXS9	549 aa		18.87	■□□□□ 0.61
CIRBP-238	ENST00000592412	TBC1D3E	A0A087X179	549 aa		18.87	■□□□□ 0.61
CIRBP-238	ENST00000592412	TBC1D3K	A0A087X1G2	549 aa		18.87	■□□□□ 0.61
CIRBP-238	ENST00000592412	TBC1D3F	A6NER0	549 aa	Predicted RBP	18.87	■□□□□ 0.61
CIRBP-238	ENST00000592412	TBC1D3L	B9A6J9	549 aa		18.87	■□□□□ 0.61
CIRBP-238	ENST00000592412	PMM2	O15305	246 aa		18.87	■□□□□ 0.61
CIRBP-238	ENST00000592412	RTN2	O75298	545 aa		18.87	■□□□□ 0.61
CIRBP-238	ENST00000592412	IL1B	P01584	269 aa		18.87	■□□□□ 0.61
CIRBP-238	ENST00000592412	TBC1D3H	P0C7X1	549 aa		18.87	■□□□□ 0.61
CIRBP-238	ENST00000592412	ELAVL3	Q14576	367 aa	Known RBP	18.87	■□□□□ 0.61
CIRBP-238	ENST00000592412	ZC3H12A	Q5D1E8	599 aa	Known RBP	18.87	■□□□□ 0.61
CIRBP-238	ENST00000592412	TBC1D3G	Q6DHY5	549 aa		18.87	■□□□□ 0.61
CIRBP-238	ENST00000592412	TBC1D3C	Q6IPX1	549 aa		18.87	■□□□□ 0.61
CIRBP-238	ENST00000592412	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	18.87	■□□□□ 0.61
CIRBP-238	ENST00000592412	CHSY1	Q86X52	802 aa		18.87	■□□□□ 0.61
CIRBP-238	ENST00000592412	TBC1D3	Q8IZP1	549 aa	Predicted RBP	18.87	■□□□□ 0.61
CIRBP-238	ENST00000592412	FMR1NB	Q8N0W7	255 aa	Predicted RBP	18.87	■□□□□ 0.61
CIRBP-238	ENST00000592412	PPM1K	Q8N3J5	372 aa		18.87	■□□□□ 0.61
CIRBP-238	ENST00000592412	SNIP1	Q8TAD8	396 aa	Known RBP	18.87	■□□□□ 0.61
CIRBP-238	ENST00000592412	SPATA20	Q8TB22	786 aa		18.87	■□□□□ 0.61
CIRBP-238	ENST00000592412	SLC39A7	Q92504	469 aa		18.87	■□□□□ 0.61
CIRBP-238	ENST00000592412	FAM149B1	Q96BN6	582 aa		18.87	■□□□□ 0.61
CIRBP-238	ENST00000592412	NT5C1B	Q96P26	610 aa		18.87	■□□□□ 0.61
CIRBP-238	ENST00000592412	PRMT1	Q99873	361 aa	Known RBP	18.87	■□□□□ 0.61
CIRBP-238	ENST00000592412	DOCK9	Q9BZ29	2069 aa		18.87	■□□□□ 0.61
CIRBP-238	ENST00000592412	CYTH4	Q9UIA0	394 aa		18.87	■□□□□ 0.61
CIRBP-238	ENST00000592412	CEP83	Q9Y592	693 aa		18.87	■□□□□ 0.61
CIRBP-238	ENST00000592412	AK5	Q9Y6K8	562 aa		18.87	■□□□□ 0.61
CIRBP-238	ENST00000592412	ATXN7	O15265	892 aa	Predicted RBP	18.86	■□□□□ 0.61
CIRBP-238	ENST00000592412	MOCS3	O95396	460 aa		18.86	■□□□□ 0.61
CIRBP-238	ENST00000592412	PDGFRA	P16234	1089 aa		18.86	■□□□□ 0.61
CIRBP-238	ENST00000592412	LRRC63	Q05C16	580 aa		18.86	■□□□□ 0.61
CIRBP-238	ENST00000592412	PROX2	Q3B8N5	592 aa		18.86	■□□□□ 0.61
CIRBP-238	ENST00000592412	BEND5	Q7L4P6	421 aa		18.86	■□□□□ 0.61
CIRBP-238	ENST00000592412	RRAGA	Q7L523	313 aa		18.86	■□□□□ 0.61
CIRBP-238	ENST00000592412	MFSD2A	Q8NA29	543 aa		18.86	■□□□□ 0.61
CIRBP-238	ENST00000592412	RFFL	Q8WZ73	363 aa		18.86	■□□□□ 0.61
CIRBP-238	ENST00000592412	KREMEN1	Q96MU8	473 aa		18.86	■□□□□ 0.61
CIRBP-238	ENST00000592412	SCAND2P	Q9GZW5	306 aa	Predicted RBP	18.86	■□□□□ 0.61
CIRBP-238	ENST00000592412	CAAP1	Q9H8G2	361 aa		18.86	■□□□□ 0.61
CIRBP-238	ENST00000592412	RMND1	Q9NWS8	449 aa		18.86	■□□□□ 0.61
CIRBP-238	ENST00000592412	PLRG1	O43660	514 aa	Known RBP	18.85	■□□□□ 0.61
CIRBP-238	ENST00000592412	CKMT2	P17540	419 aa		18.85	■□□□□ 0.61
CIRBP-238	ENST00000592412	MAT2A	P31153	395 aa	Known RBP	18.85	■□□□□ 0.61
CIRBP-238	ENST00000592412	INSM1	Q01101	510 aa	Predicted RBP	18.85	■□□□□ 0.61
CIRBP-238	ENST00000592412	ILK	Q13418	452 aa		18.85	■□□□□ 0.61
CIRBP-238	ENST00000592412	AGBL4	Q5VU57	503 aa		18.85	■□□□□ 0.61
CIRBP-238	ENST00000592412	RNF219	Q5W0B1	726 aa	Predicted RBP	18.85	■□□□□ 0.61
CIRBP-238	ENST00000592412	CXorf57	Q6NSI4	855 aa	Known RBP	18.85	■□□□□ 0.61
CIRBP-238	ENST00000592412	DENND1B	Q6P3S1	775 aa		18.85	■□□□□ 0.61
CIRBP-238	ENST00000592412	PCSK4	Q6UW60	755 aa		18.85	■□□□□ 0.61
CIRBP-238	ENST00000592412	CCDC117	Q8IWD4	279 aa	Predicted RBP	18.85	■□□□□ 0.61
CIRBP-238	ENST00000592412	CCAR2	Q8N163	923 aa	Known RBP	18.85	■□□□□ 0.61
CIRBP-238	ENST00000592412	OXR1	Q8N573	874 aa		18.85	■□□□□ 0.61
CIRBP-238	ENST00000592412	OR52K2	Q8NGK3	314 aa		18.85	■□□□□ 0.61
CIRBP-238	ENST00000592412	ALG14	Q96F25	216 aa		18.85	■□□□□ 0.61
CIRBP-238	ENST00000592412	FCRL3	Q96P31	734 aa	Predicted RBP	18.85	■□□□□ 0.61
CIRBP-238	ENST00000592412	GSDMA	Q96QA5	445 aa		18.85	■□□□□ 0.61
CIRBP-238	ENST00000592412	SPAG5	Q96R06	1193 aa		18.85	■□□□□ 0.61
CIRBP-238	ENST00000592412	SLC4A5	Q9BY07	1137 aa		18.85	■□□□□ 0.61
CIRBP-238	ENST00000592412	ST7	Q9NRC1	585 aa		18.85	■□□□□ 0.61
CIRBP-238	ENST00000592412	TPX2	Q9ULW0	747 aa	Known RBP	18.85	■□□□□ 0.61
CIRBP-238	ENST00000592412	CA5B	Q9Y2D0	317 aa		18.85	■□□□□ 0.61
CIRBP-238	ENST00000592412	TK2	O00142	265 aa		18.84	■□□□□ 0.61

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