RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 ACADMP11310 421 aa28.03■■■□□ 2.08
SMAD4-213ENST00000591914 ITPKAP23677 461 aa28.03■■■□□ 2.08
SMAD4-213ENST00000591914 OXTRP30559 389 aa28.03■■■□□ 2.08
SMAD4-213ENST00000591914 RFC1P35251 1148 aaPredicted RBP28.03■■■□□ 2.08
SMAD4-213ENST00000591914 HOXD12P35452 270 aa28.03■■■□□ 2.08
SMAD4-213ENST00000591914 LIMK1P53667 647 aa28.03■■■□□ 2.08
SMAD4-213ENST00000591914 SULT2A1Q06520 285 aa28.03■■■□□ 2.08
SMAD4-213ENST00000591914 ZNF33AQ06730 810 aa28.03■■■□□ 2.08
SMAD4-213ENST00000591914 RAB6CQ53S08 254 aa28.03■■■□□ 2.08
SMAD4-213ENST00000591914 FIGNQ5HY92 759 aa28.03■■■□□ 2.08
SMAD4-213ENST00000591914 E4F1Q66K89 784 aaPredicted RBP28.03■■■□□ 2.08
SMAD4-213ENST00000591914 ACAD10Q6JQN1 1059 aa28.03■■■□□ 2.08
SMAD4-213ENST00000591914 LRRC31Q6UY01 552 aa28.03■■■□□ 2.08
SMAD4-213ENST00000591914 STRADAQ7RTN6 431 aa28.03■■■□□ 2.08
SMAD4-213ENST00000591914 CACUL1Q86Y37 369 aa28.03■■■□□ 2.08
SMAD4-213ENST00000591914 SLC41A1Q8IVJ1 513 aa28.03■■■□□ 2.08
SMAD4-213ENST00000591914 CENPIQ92674 756 aaPredicted RBP28.03■■■□□ 2.08
SMAD4-213ENST00000591914 TOE1Q96GM8 510 aaKnown RBP28.03■■■□□ 2.08
SMAD4-213ENST00000591914 ZNF419Q96HQ0 510 aaPredicted RBP28.03■■■□□ 2.08
SMAD4-213ENST00000591914 PPP1R9BQ96SB3 815 aa28.03■■■□□ 2.08
SMAD4-213ENST00000591914 FEM1AQ9BSK4 669 aa28.03■■■□□ 2.08
SMAD4-213ENST00000591914 SELENOOQ9BVL4 669 aa28.03■■■□□ 2.08
SMAD4-213ENST00000591914 RAB6CQ9H0N0 254 aa28.03■■■□□ 2.08
SMAD4-213ENST00000591914 TMEM74BQ9NUR3 256 aa28.03■■■□□ 2.08
SMAD4-213ENST00000591914 SLCO3A1Q9UIG8 710 aa28.03■■■□□ 2.08
SMAD4-213ENST00000591914 OR51B4Q9Y5P0 310 aa28.03■■■□□ 2.08
SMAD4-213ENST00000591914 CACNA1AO00555 2505 aa28.02■■■□□ 2.08
SMAD4-213ENST00000591914 SIGLEC16A6NMB1 481 aa28.02■■■□□ 2.08
SMAD4-213ENST00000591914 GOLGA6L19H0YKK7 550 aa28.02■■■□□ 2.08
SMAD4-213ENST00000591914 SLC30A4O14863 429 aa28.02■■■□□ 2.08
SMAD4-213ENST00000591914 NDUFS2O75306 463 aa28.02■■■□□ 2.08
SMAD4-213ENST00000591914 PBX1P40424 430 aa28.02■■■□□ 2.08
SMAD4-213ENST00000591914 RPS14P62263 151 aaKnown RBP28.02■■■□□ 2.08
SMAD4-213ENST00000591914 ZBTB16Q05516 673 aa28.02■■■□□ 2.08
SMAD4-213ENST00000591914 ASIC2Q16515 512 aa28.02■■■□□ 2.08
SMAD4-213ENST00000591914 CDO1Q16878 200 aa28.02■■■□□ 2.08
SMAD4-213ENST00000591914 ALFQ53S48 1182 aa28.02■■■□□ 2.08
SMAD4-213ENST00000591914 SH3PXD2AQ5TCZ1 1133 aa28.02■■■□□ 2.08
SMAD4-213ENST00000591914 RNF219Q5W0B1 726 aaPredicted RBP28.02■■■□□ 2.08
SMAD4-213ENST00000591914 RPL10LQ96L21 214 aaKnown RBP28.02■■■□□ 2.08
SMAD4-213ENST00000591914 RTKNQ9BST9 563 aa28.02■■■□□ 2.08
SMAD4-213ENST00000591914 RSPH9Q9H1X1 276 aaPredicted RBP28.02■■■□□ 2.08
SMAD4-213ENST00000591914 EVLQ9UI08 416 aaPredicted RBP28.02■■■□□ 2.08
SMAD4-213ENST00000591914 TTC34A8MYJ7 566 aa28.01■■■□□ 2.07
SMAD4-213ENST00000591914 PATE3B3GLJ2 98 aa28.01■■■□□ 2.07
SMAD4-213ENST00000591914 E9PAM4 449 aa28.01■■■□□ 2.07
SMAD4-213ENST00000591914 KHNYNO15037 678 aaKnown RBP28.01■■■□□ 2.07
SMAD4-213ENST00000591914 SIN3BO75182 1162 aa28.01■■■□□ 2.07
SMAD4-213ENST00000591914 TNFAIP3P21580 790 aa28.01■■■□□ 2.07
SMAD4-213ENST00000591914 PRKCIP41743 596 aa28.01■■■□□ 2.07
SMAD4-213ENST00000591914 C9orf64Q5T6V5 341 aa28.01■■■□□ 2.07
SMAD4-213ENST00000591914 SFMBT2Q5VUG0 894 aa28.01■■■□□ 2.07
SMAD4-213ENST00000591914 WDR59Q6PJI9 974 aa28.01■■■□□ 2.07
SMAD4-213ENST00000591914 ERMP1Q7Z2K6 904 aa28.01■■■□□ 2.07
SMAD4-213ENST00000591914 MCOLN2Q8IZK6 566 aa28.01■■■□□ 2.07
SMAD4-213ENST00000591914 HSPA12BQ96MM6 686 aa28.01■■■□□ 2.07
SMAD4-213ENST00000591914 GON4LQ3T8J9 2241 aa28■■■□□ 2.07
SMAD4-213ENST00000591914 LNP1A1A4G5 178 aa28■■■□□ 2.07
SMAD4-213ENST00000591914 TARSL2A2RTX5 802 aaKnown RBP28■■■□□ 2.07
SMAD4-213ENST00000591914 NUMBP49757 651 aa28■■■□□ 2.07
SMAD4-213ENST00000591914 STK19P49842 368 aaPredicted RBP28■■■□□ 2.07
SMAD4-213ENST00000591914 VASPP50552 380 aaPredicted RBP28■■■□□ 2.07
SMAD4-213ENST00000591914 HDAC4P56524 1084 aa28■■■□□ 2.07
SMAD4-213ENST00000591914 UBASH3AP57075 661 aa28■■■□□ 2.07
SMAD4-213ENST00000591914 PPP1R15BQ5SWA1 713 aa28■■■□□ 2.07
SMAD4-213ENST00000591914 ZNF776Q68DI1 518 aaPredicted RBP28■■■□□ 2.07
SMAD4-213ENST00000591914 PPP1R2P3Q6NXS1 205 aa28■■■□□ 2.07
SMAD4-213ENST00000591914 DNAJC24Q6P3W2 148 aa28■■■□□ 2.07
SMAD4-213ENST00000591914 FOXJ1Q92949 421 aa28■■■□□ 2.07
SMAD4-213ENST00000591914 NUP58Q9BVL2 599 aa28■■■□□ 2.07
SMAD4-213ENST00000591914 HAUS4Q9H6D7 363 aa28■■■□□ 2.07
SMAD4-213ENST00000591914 TAS2R14Q9NYV8 317 aa28■■■□□ 2.07
SMAD4-213ENST00000591914 ATXN2Q99700 1313 aaKnown RBP27.99■■■□□ 2.07
SMAD4-213ENST00000591914 DOCK4Q8N1I0 1966 aa27.99■■■□□ 2.07
SMAD4-213ENST00000591914 EDDM13A0A1B0GTR0 161 aa27.99■■■□□ 2.07
SMAD4-213ENST00000591914 GPD1P21695 349 aa27.99■■■□□ 2.07
SMAD4-213ENST00000591914 ADRA1BP35368 520 aa27.99■■■□□ 2.07
SMAD4-213ENST00000591914 DGLUCYQ7Z3D6 616 aa27.99■■■□□ 2.07
SMAD4-213ENST00000591914 ZNF571Q7Z3V5 609 aaPredicted RBP27.99■■■□□ 2.07
SMAD4-213ENST00000591914 SETD3Q86TU7 594 aaPredicted RBP27.99■■■□□ 2.07
SMAD4-213ENST00000591914 CADM4Q8NFZ8 388 aa27.99■■■□□ 2.07
SMAD4-213ENST00000591914 FAM172AQ8WUF8 416 aa27.99■■■□□ 2.07
SMAD4-213ENST00000591914 VCPIP1Q96JH7 1222 aa27.99■■■□□ 2.07
SMAD4-213ENST00000591914 GPR174Q9BXC1 333 aa27.99■■■□□ 2.07
SMAD4-213ENST00000591914 MPP6Q9NZW5 540 aa27.99■■■□□ 2.07
SMAD4-213ENST00000591914 VPS28Q9UK41 221 aa27.99■■■□□ 2.07
SMAD4-213ENST00000591914 DNTTP04053 509 aa27.98■■■□□ 2.07
SMAD4-213ENST00000591914 RRM1P23921 792 aa27.98■■■□□ 2.07
SMAD4-213ENST00000591914 NNMTP40261 264 aa27.98■■■□□ 2.07
SMAD4-213ENST00000591914 NRG1Q02297 640 aaPredicted RBP27.98■■■□□ 2.07
SMAD4-213ENST00000591914 ARL13BQ3SXY8 428 aa27.98■■■□□ 2.07
SMAD4-213ENST00000591914 STPG1Q5TH74 334 aa27.98■■■□□ 2.07
SMAD4-213ENST00000591914 EDEM2Q9BV94 578 aa27.98■■■□□ 2.07
SMAD4-213ENST00000591914 PPARGC1AQ9UBK2 798 aaKnown RBP27.98■■■□□ 2.07
SMAD4-213ENST00000591914 ZNF212Q9UDV6 495 aa27.98■■■□□ 2.07
SMAD4-213ENST00000591914 NYNRINQ9P2P1 1898 aaKnown RBP27.98■■■□□ 2.07
SMAD4-213ENST00000591914 A0A1W2PQJ5 194 aa27.97■■■□□ 2.07
SMAD4-213ENST00000591914 SRGAP2O75044 1071 aa27.97■■■□□ 2.07
SMAD4-213ENST00000591914 RHOCP08134 193 aa27.97■■■□□ 2.07
SMAD4-213ENST00000591914 ZNF143P52747 638 aaPredicted RBP27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms