RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 SPATC1Q76KD6 591 aa6.65□□□□□ -1.34
VPS4B-205ENST00000591383 MCOLN2Q8IZK6 566 aa6.65□□□□□ -1.34
VPS4B-205ENST00000591383 DEFB106AQ8N104 65 aa6.65□□□□□ -1.34
VPS4B-205ENST00000591383 TTC8Q8TAM2 541 aa6.65□□□□□ -1.34
VPS4B-205ENST00000591383 BPIFB1Q8TDL5 484 aa6.65□□□□□ -1.34
VPS4B-205ENST00000591383 GPBAR1Q8TDU6 330 aa6.65□□□□□ -1.34
VPS4B-205ENST00000591383 DEPDC1BQ8WUY9 529 aa6.65□□□□□ -1.34
VPS4B-205ENST00000591383 CTNNBL1Q8WYA6 563 aaPredicted RBP6.65□□□□□ -1.34
VPS4B-205ENST00000591383 ELSPBP1Q96BH3 223 aa6.65□□□□□ -1.34
VPS4B-205ENST00000591383 ARHGEF26Q96DR7 871 aa6.65□□□□□ -1.34
VPS4B-205ENST00000591383 ASIC4Q96FT7 647 aa6.65□□□□□ -1.34
VPS4B-205ENST00000591383 CFAP57Q96MR6 1250 aa6.65□□□□□ -1.34
VPS4B-205ENST00000591383 SERPINB11Q96P15 392 aa6.65□□□□□ -1.34
VPS4B-205ENST00000591383 SLC2A13Q96QE2 648 aa6.65□□□□□ -1.34
VPS4B-205ENST00000591383 TBCBQ99426 244 aa6.65□□□□□ -1.34
VPS4B-205ENST00000591383 TM9SF2Q99805 663 aa6.65□□□□□ -1.34
VPS4B-205ENST00000591383 BAG1Q99933 345 aaPredicted RBP6.65□□□□□ -1.34
VPS4B-205ENST00000591383 PACSIN1Q9BY11 444 aa6.65□□□□□ -1.34
VPS4B-205ENST00000591383 PLA2G2FQ9BZM2 168 aa6.65□□□□□ -1.34
VPS4B-205ENST00000591383 RNF38Q9H0F5 515 aa6.65□□□□□ -1.34
VPS4B-205ENST00000591383 SOX17Q9H6I2 414 aaPredicted RBP6.65□□□□□ -1.34
VPS4B-205ENST00000591383 BRD9Q9H8M2 597 aa6.65□□□□□ -1.34
VPS4B-205ENST00000591383 KCNK12Q9HB15 430 aa6.65□□□□□ -1.34
VPS4B-205ENST00000591383 GKN1Q9NS71 199 aa6.65□□□□□ -1.34
VPS4B-205ENST00000591383 ASNSD1Q9NWL6 643 aa6.65□□□□□ -1.34
VPS4B-205ENST00000591383 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.65□□□□□ -1.34
VPS4B-205ENST00000591383 WDR35Q9P2L0 1181 aa6.65□□□□□ -1.34
VPS4B-205ENST00000591383 PFDN2Q9UHV9 154 aa6.65□□□□□ -1.34
VPS4B-205ENST00000591383 FBXL21Q9UKT6 434 aa6.65□□□□□ -1.34
VPS4B-205ENST00000591383 SCINQ9Y6U3 715 aa6.65□□□□□ -1.34
VPS4B-205ENST00000591383 TMEM110-MUSTN1A8MSY1 372 aa6.64□□□□□ -1.35
VPS4B-205ENST00000591383 ANHXE9PGG2 379 aa6.64□□□□□ -1.35
VPS4B-205ENST00000591383 M0QYT0 321 aa6.64□□□□□ -1.35
VPS4B-205ENST00000591383 ZNF263O14978 683 aa6.64□□□□□ -1.35
VPS4B-205ENST00000591383 CCP110O43303 1012 aa6.64□□□□□ -1.35
VPS4B-205ENST00000591383 STC2O76061 302 aa6.64□□□□□ -1.35
VPS4B-205ENST00000591383 TRUB2O95900 331 aaKnown RBP6.64□□□□□ -1.35
VPS4B-205ENST00000591383 H2AFZP0C0S5 128 aa6.64□□□□□ -1.35
VPS4B-205ENST00000591383 ARAFP10398 606 aa6.64□□□□□ -1.35
VPS4B-205ENST00000591383 KRT3P12035 628 aa6.64□□□□□ -1.35
VPS4B-205ENST00000591383 GZMAP12544 262 aa6.64□□□□□ -1.35
VPS4B-205ENST00000591383 ARSAP15289 507 aa6.64□□□□□ -1.35
VPS4B-205ENST00000591383 PSMC3P17980 439 aa6.64□□□□□ -1.35
VPS4B-205ENST00000591383 GPD1P21695 349 aa6.64□□□□□ -1.35
VPS4B-205ENST00000591383 PSMA2P25787 234 aa6.64□□□□□ -1.35
VPS4B-205ENST00000591383 GJC1P36383 396 aa6.64□□□□□ -1.35
VPS4B-205ENST00000591383 MATKP42679 507 aa6.64□□□□□ -1.35
VPS4B-205ENST00000591383 TBX4P57082 545 aa6.64□□□□□ -1.35
VPS4B-205ENST00000591383 DEUP1Q05D60 604 aa6.64□□□□□ -1.35
VPS4B-205ENST00000591383 TDGQ13569 410 aa6.64□□□□□ -1.35
VPS4B-205ENST00000591383 INPP5AQ14642 412 aa6.64□□□□□ -1.35
VPS4B-205ENST00000591383 C15orf59Q2T9L4 293 aaPredicted RBP6.64□□□□□ -1.35
VPS4B-205ENST00000591383 OTUD1Q5VV17 481 aaPredicted RBP6.64□□□□□ -1.35
VPS4B-205ENST00000591383 SYPL2Q5VXT5 272 aa6.64□□□□□ -1.35
VPS4B-205ENST00000591383 MRM1Q6IN84 353 aaKnown RBP6.64□□□□□ -1.35
VPS4B-205ENST00000591383 TRNP1Q6NT89 227 aa6.64□□□□□ -1.35
VPS4B-205ENST00000591383 KLHDC10Q6PID8 442 aa6.64□□□□□ -1.35
VPS4B-205ENST00000591383 H2AFVQ71UI9 128 aa6.64□□□□□ -1.35
VPS4B-205ENST00000591383 KIAA1328Q86T90 577 aa6.64□□□□□ -1.35
VPS4B-205ENST00000591383 CHSY1Q86X52 802 aa6.64□□□□□ -1.35
VPS4B-205ENST00000591383 DENND1CQ8IV53 801 aa6.64□□□□□ -1.35
VPS4B-205ENST00000591383 BBS7Q8IWZ6 715 aa6.64□□□□□ -1.35
VPS4B-205ENST00000591383 CACTIN-AS1Q8N1I8 211 aa6.64□□□□□ -1.35
VPS4B-205ENST00000591383 CPA6Q8N4T0 437 aa6.64□□□□□ -1.35
VPS4B-205ENST00000591383 ZSCAN1Q8NBB4 408 aa6.64□□□□□ -1.35
VPS4B-205ENST00000591383 ACRBPQ8NEB7 543 aa6.64□□□□□ -1.35
VPS4B-205ENST00000591383 ZNF564Q8TBZ8 553 aaPredicted RBP6.64□□□□□ -1.35
VPS4B-205ENST00000591383 CSGALNACT1Q8TDX6 532 aa6.64□□□□□ -1.35
VPS4B-205ENST00000591383 RXFP2Q8WXD0 754 aa6.64□□□□□ -1.35
VPS4B-205ENST00000591383 ATP2A3Q93084 1043 aa6.64□□□□□ -1.35
VPS4B-205ENST00000591383 WBP2Q969T9 261 aa6.64□□□□□ -1.35
VPS4B-205ENST00000591383 E2F7Q96AV8 911 aa6.64□□□□□ -1.35
VPS4B-205ENST00000591383 DESI2Q9BSY9 194 aa6.64□□□□□ -1.35
VPS4B-205ENST00000591383 RPP25Q9BUL9 199 aaKnown RBP6.64□□□□□ -1.35
VPS4B-205ENST00000591383 TRMT61BQ9BVS5 477 aaKnown RBP6.64□□□□□ -1.35
VPS4B-205ENST00000591383 NUP85Q9BW27 656 aa6.64□□□□□ -1.35
VPS4B-205ENST00000591383 TRIM7Q9C029 511 aa6.64□□□□□ -1.35
VPS4B-205ENST00000591383 THAP2Q9H0W7 228 aa6.64□□□□□ -1.35
VPS4B-205ENST00000591383 TRPV4Q9HBA0 871 aa6.64□□□□□ -1.35
VPS4B-205ENST00000591383 CD320Q9NPF0 282 aa6.64□□□□□ -1.35
VPS4B-205ENST00000591383 LUC7LQ9NQ29 371 aaKnown RBP6.64□□□□□ -1.35
VPS4B-205ENST00000591383 PARVAQ9NVD7 372 aa6.64□□□□□ -1.35
VPS4B-205ENST00000591383 THG1LQ9NWX6 298 aaKnown RBP6.64□□□□□ -1.35
VPS4B-205ENST00000591383 DUS2Q9NX74 493 aaKnown RBP6.64□□□□□ -1.35
VPS4B-205ENST00000591383 CTTNBP2NLQ9P2B4 639 aa6.64□□□□□ -1.35
VPS4B-205ENST00000591383 IGSF9Q9P2J2 1179 aa6.64□□□□□ -1.35
VPS4B-205ENST00000591383 ANAPC7Q9UJX3 599 aa6.64□□□□□ -1.35
VPS4B-205ENST00000591383 CA14Q9ULX7 337 aa6.64□□□□□ -1.35
VPS4B-205ENST00000591383 DUSP12Q9UNI6 340 aa6.64□□□□□ -1.35
VPS4B-205ENST00000591383 SORCS3Q9UPU3 1222 aa6.64□□□□□ -1.35
VPS4B-205ENST00000591383 HBS1LQ9Y450 684 aaKnown RBP6.64□□□□□ -1.35
VPS4B-205ENST00000591383 CORINQ9Y5Q5 1042 aa6.64□□□□□ -1.35
VPS4B-205ENST00000591383 MYO10Q9HD67 2058 aa6.64□□□□□ -1.35
VPS4B-205ENST00000591383 E2F8A0AVK6 867 aa6.63□□□□□ -1.35
VPS4B-205ENST00000591383 UPK3BL1B0FP48 263 aa6.63□□□□□ -1.35
VPS4B-205ENST00000591383 UPK3BL2E5RIL1 263 aa6.63□□□□□ -1.35
VPS4B-205ENST00000591383 TRDMT1O14717 391 aaKnown RBP6.63□□□□□ -1.35
VPS4B-205ENST00000591383 NDUFA10O95299 355 aa6.63□□□□□ -1.35
VPS4B-205ENST00000591383 NFATC1O95644 943 aa6.63□□□□□ -1.35
VPS4B-205ENST00000591383 ECEL1O95672 775 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms