RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 FAM172AQ8WUF8 416 aa23■■□□□ 1.27
MBD3-208ENST00000590830 RMDN1Q96DB5 314 aa23■■□□□ 1.27
MBD3-208ENST00000590830 VCPIP1Q96JH7 1222 aa23■■□□□ 1.27
MBD3-208ENST00000590830 RPL10LQ96L21 214 aaKnown RBP23■■□□□ 1.27
MBD3-208ENST00000590830 ZNF212Q9UDV6 495 aa23■■□□□ 1.27
MBD3-208ENST00000590830 SUN2Q9UH99 717 aa23■■□□□ 1.27
MBD3-208ENST00000590830 CAPN11Q9UMQ6 739 aa23■■□□□ 1.27
MBD3-208ENST00000590830 SPTBN4Q9H254 2564 aa22.99■■□□□ 1.27
MBD3-208ENST00000590830 GDF9O60383 454 aa22.99■■□□□ 1.27
MBD3-208ENST00000590830 SRGAP2O75044 1071 aa22.99■■□□□ 1.27
MBD3-208ENST00000590830 FTLP02792 175 aaPredicted RBP22.99■■□□□ 1.27
MBD3-208ENST00000590830 SRPRAP08240 638 aaKnown RBP22.99■■□□□ 1.27
MBD3-208ENST00000590830 TPMTP51580 245 aa22.99■■□□□ 1.27
MBD3-208ENST00000590830 RPS14P62263 151 aaKnown RBP22.99■■□□□ 1.27
MBD3-208ENST00000590830 RPL6Q02878 288 aaKnown RBP22.99■■□□□ 1.27
MBD3-208ENST00000590830 ARID5BQ14865 1188 aa22.99■■□□□ 1.27
MBD3-208ENST00000590830 HNRNPA1L2Q32P51 320 aaKnown RBP22.99■■□□□ 1.27
MBD3-208ENST00000590830 C9orf64Q5T6V5 341 aa22.99■■□□□ 1.27
MBD3-208ENST00000590830 RNF219Q5W0B1 726 aaPredicted RBP22.99■■□□□ 1.27
MBD3-208ENST00000590830 SLC36A4Q6YBV0 504 aa22.99■■□□□ 1.27
MBD3-208ENST00000590830 CCDC185Q8N715 623 aa22.99■■□□□ 1.27
MBD3-208ENST00000590830 PRCCQ92733 491 aaPredicted RBP22.99■■□□□ 1.27
MBD3-208ENST00000590830 MCEEQ96PE7 176 aa22.99■■□□□ 1.27
MBD3-208ENST00000590830 RXFP3Q9NSD7 469 aa22.99■■□□□ 1.27
MBD3-208ENST00000590830 CKAP5Q14008 2032 aa22.99■■□□□ 1.27
MBD3-208ENST00000590830 DCHS1Q96JQ0 3298 aa22.99■■□□□ 1.27
MBD3-208ENST00000590830 FAM72CH0Y354 149 aa22.98■■□□□ 1.27
MBD3-208ENST00000590830 CCP110O43303 1012 aa22.98■■□□□ 1.27
MBD3-208ENST00000590830 SIN3BO75182 1162 aa22.98■■□□□ 1.27
MBD3-208ENST00000590830 GYPCP04921 128 aa22.98■■□□□ 1.27
MBD3-208ENST00000590830 GZMAP12544 262 aa22.98■■□□□ 1.27
MBD3-208ENST00000590830 ZNF143P52747 638 aaPredicted RBP22.98■■□□□ 1.27
MBD3-208ENST00000590830 OXCT1P55809 520 aa22.98■■□□□ 1.27
MBD3-208ENST00000590830 ST8SIA6P61647 398 aa22.98■■□□□ 1.27
MBD3-208ENST00000590830 ZBED6P86452 979 aa22.98■■□□□ 1.27
MBD3-208ENST00000590830 MAMLD1Q13495 774 aa22.98■■□□□ 1.27
MBD3-208ENST00000590830 SPDYCQ5MJ68 293 aa22.98■■□□□ 1.27
MBD3-208ENST00000590830 ACBD5Q5T8D3 534 aaPredicted RBP22.98■■□□□ 1.27
MBD3-208ENST00000590830 FAM72AQ5TYM5 149 aa22.98■■□□□ 1.27
MBD3-208ENST00000590830 TCEAL6Q6IPX3 200 aa22.98■■□□□ 1.27
MBD3-208ENST00000590830 PLEKHA7Q6IQ23 1121 aa22.98■■□□□ 1.27
MBD3-208ENST00000590830 FAM72DQ6L9T8 149 aa22.98■■□□□ 1.27
MBD3-208ENST00000590830 LRRC31Q6UY01 552 aa22.98■■□□□ 1.27
MBD3-208ENST00000590830 FAM72BQ86X60 149 aa22.98■■□□□ 1.27
MBD3-208ENST00000590830 SLC41A1Q8IVJ1 513 aa22.98■■□□□ 1.27
MBD3-208ENST00000590830 SYN2Q92777 582 aaPredicted RBP22.98■■□□□ 1.27
MBD3-208ENST00000590830 TCEAL3Q969E4 200 aa22.98■■□□□ 1.27
MBD3-208ENST00000590830 VPS45Q9NRW7 570 aa22.98■■□□□ 1.27
MBD3-208ENST00000590830 TMEM74BQ9NUR3 256 aa22.98■■□□□ 1.27
MBD3-208ENST00000590830 WSB2Q9NYS7 404 aaPredicted RBP22.98■■□□□ 1.27
MBD3-208ENST00000590830 CEP250Q9BV73 2442 aa22.98■■□□□ 1.27
MBD3-208ENST00000590830 ATMINO43313 823 aaPredicted RBP22.97■■□□□ 1.27
MBD3-208ENST00000590830 IGLV3-19P01714 112 aa22.97■■□□□ 1.27
MBD3-208ENST00000590830 LMNB2Q03252 620 aa22.97■■□□□ 1.27
MBD3-208ENST00000590830 RSPO4Q2I0M5 234 aaPredicted RBP22.97■■□□□ 1.27
MBD3-208ENST00000590830 MANEALQ5VSG8 457 aa22.97■■□□□ 1.27
MBD3-208ENST00000590830 TFAP2DQ7Z6R9 452 aa22.97■■□□□ 1.27
MBD3-208ENST00000590830 RNF214Q8ND24 703 aa22.97■■□□□ 1.27
MBD3-208ENST00000590830 PIGKQ92643 395 aa22.97■■□□□ 1.27
MBD3-208ENST00000590830 TOE1Q96GM8 510 aaKnown RBP22.97■■□□□ 1.27
MBD3-208ENST00000590830 FAM129BQ96TA1 746 aa22.97■■□□□ 1.27
MBD3-208ENST00000590830 PSMB7Q99436 277 aa22.97■■□□□ 1.27
MBD3-208ENST00000590830 OSBPL2Q9H1P3 480 aa22.97■■□□□ 1.27
MBD3-208ENST00000590830 OR12D3Q9UGF7 316 aa22.97■■□□□ 1.27
MBD3-208ENST00000590830 PLXND1Q9Y4D7 1925 aa22.97■■□□□ 1.27
MBD3-208ENST00000590830 THADAQ6YHU6 1953 aa22.97■■□□□ 1.27
MBD3-208ENST00000590830 ITIH6Q6UXX5 1313 aa22.97■■□□□ 1.27
MBD3-208ENST00000590830 DNAH14Q0VDD8 3507 aa22.96■■□□□ 1.27
MBD3-208ENST00000590830 PATE3B3GLJ2 98 aa22.96■■□□□ 1.27
MBD3-208ENST00000590830 RTN2O75298 545 aa22.96■■□□□ 1.27
MBD3-208ENST00000590830 PLEKP08567 350 aaPredicted RBP22.96■■□□□ 1.27
MBD3-208ENST00000590830 VAV1P15498 845 aa22.96■■□□□ 1.27
MBD3-208ENST00000590830 ITPKAP23677 461 aa22.96■■□□□ 1.27
MBD3-208ENST00000590830 CD6P30203 668 aa22.96■■□□□ 1.27
MBD3-208ENST00000590830 ID4P47928 161 aa22.96■■□□□ 1.27
MBD3-208ENST00000590830 NRG1Q02297 640 aaPredicted RBP22.96■■□□□ 1.27
MBD3-208ENST00000590830 SULT2A1Q06520 285 aa22.96■■□□□ 1.27
MBD3-208ENST00000590830 CYP2U1Q7Z449 544 aa22.96■■□□□ 1.27
MBD3-208ENST00000590830 FRS2Q8WU20 508 aa22.96■■□□□ 1.27
MBD3-208ENST00000590830 PTPRN2Q92932 1015 aa22.96■■□□□ 1.27
MBD3-208ENST00000590830 ZNF419Q96HQ0 510 aaPredicted RBP22.96■■□□□ 1.27
MBD3-208ENST00000590830 CNPY3Q9BT09 278 aa22.96■■□□□ 1.27
MBD3-208ENST00000590830 RSPH9Q9H1X1 276 aaPredicted RBP22.96■■□□□ 1.27
MBD3-208ENST00000590830 PPARGC1AQ9UBK2 798 aaKnown RBP22.96■■□□□ 1.27
MBD3-208ENST00000590830 A0A0D9SEW6 157 aa22.95■■□□□ 1.26
MBD3-208ENST00000590830 PRR5-ARHGAP8B1AHC4 643 aa22.95■■□□□ 1.26
MBD3-208ENST00000590830 AP5Z1O43299 807 aa22.95■■□□□ 1.26
MBD3-208ENST00000590830 RHOCP08134 193 aa22.95■■□□□ 1.26
MBD3-208ENST00000590830 ARHGAP8P85298 464 aa22.95■■□□□ 1.26
MBD3-208ENST00000590830 ZNF33AQ06730 810 aa22.95■■□□□ 1.26
MBD3-208ENST00000590830 ARL13BQ3SXY8 428 aa22.95■■□□□ 1.26
MBD3-208ENST00000590830 LYSMD4Q5XG99 296 aa22.95■■□□□ 1.26
MBD3-208ENST00000590830 PPP1R2P3Q6NXS1 205 aa22.95■■□□□ 1.26
MBD3-208ENST00000590830 DCUN1D2Q6PH85 259 aa22.95■■□□□ 1.26
MBD3-208ENST00000590830 NTAN1Q96AB6 310 aa22.95■■□□□ 1.26
MBD3-208ENST00000590830 TRIM7Q9C029 511 aa22.95■■□□□ 1.26
MBD3-208ENST00000590830 ZYG11BQ9C0D3 744 aa22.95■■□□□ 1.26
MBD3-208ENST00000590830 ISCUQ9H1K1 167 aa22.95■■□□□ 1.26
MBD3-208ENST00000590830 FBRSQ9HAH7 460 aa22.95■■□□□ 1.26
MBD3-208ENST00000590830 PARVAQ9NVD7 372 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms