RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 TTYH3Q9C0H2 523 aa11.59□□□□□ -0.55
SMAD4-211ENST00000590499 DUSP15Q9H1R2 295 aaPredicted RBP11.59□□□□□ -0.55
SMAD4-211ENST00000590499 ANLNQ9NQW6 1124 aa11.59□□□□□ -0.55
SMAD4-211ENST00000590499 PIGVQ9NUD9 493 aa11.59□□□□□ -0.55
SMAD4-211ENST00000590499 ABCB8Q9NUT2 735 aa11.59□□□□□ -0.55
SMAD4-211ENST00000590499 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.59□□□□□ -0.55
SMAD4-211ENST00000590499 GGA2Q9UJY4 613 aa11.59□□□□□ -0.55
SMAD4-211ENST00000590499 MYO6Q9UM54 1294 aa11.59□□□□□ -0.55
SMAD4-211ENST00000590499 RAD54BQ9Y620 910 aa11.59□□□□□ -0.55
SMAD4-211ENST00000590499 STON1Q9Y6Q2 735 aa11.59□□□□□ -0.55
SMAD4-211ENST00000590499 PI4KAP42356 2102 aa11.59□□□□□ -0.55
SMAD4-211ENST00000590499 NYNRINQ9P2P1 1898 aaKnown RBP11.58□□□□□ -0.56
SMAD4-211ENST00000590499 SYNJ2BP-COX16A0A087WUM0 186 aa11.58□□□□□ -0.56
SMAD4-211ENST00000590499 M0QYT0 321 aa11.58□□□□□ -0.56
SMAD4-211ENST00000590499 LRP3O75074 770 aa11.58□□□□□ -0.56
SMAD4-211ENST00000590499 EPN2O95208 641 aa11.58□□□□□ -0.56
SMAD4-211ENST00000590499 LUC7L3O95232 432 aaKnown RBP11.58□□□□□ -0.56
SMAD4-211ENST00000590499 CAVIN2O95810 425 aa11.58□□□□□ -0.56
SMAD4-211ENST00000590499 BCKDHBP21953 392 aa11.58□□□□□ -0.56
SMAD4-211ENST00000590499 PRKCHP24723 683 aa11.58□□□□□ -0.56
SMAD4-211ENST00000590499 GBP1P32455 592 aa11.58□□□□□ -0.56
SMAD4-211ENST00000590499 LMAN2Q12907 356 aa11.58□□□□□ -0.56
SMAD4-211ENST00000590499 NME3Q13232 169 aa11.58□□□□□ -0.56
SMAD4-211ENST00000590499 NR1I3Q14994 352 aa11.58□□□□□ -0.56
SMAD4-211ENST00000590499 CLEC16AQ2KHT3 1053 aa11.58□□□□□ -0.56
SMAD4-211ENST00000590499 SLC25A52Q3SY17 297 aa11.58□□□□□ -0.56
SMAD4-211ENST00000590499 FUT11Q495W5 492 aa11.58□□□□□ -0.56
SMAD4-211ENST00000590499 FILIP1LQ4L180 1135 aa11.58□□□□□ -0.56
SMAD4-211ENST00000590499 USP39Q53GS9 565 aaKnown RBP11.58□□□□□ -0.56
SMAD4-211ENST00000590499 FSCBQ5H9T9 825 aa11.58□□□□□ -0.56
SMAD4-211ENST00000590499 ARTNQ5T4W7 220 aa11.58□□□□□ -0.56
SMAD4-211ENST00000590499 PMS2CLQ68D20 193 aa11.58□□□□□ -0.56
SMAD4-211ENST00000590499 SDE2Q6IQ49 451 aa11.58□□□□□ -0.56
SMAD4-211ENST00000590499 CHST9Q7L1S5 443 aa11.58□□□□□ -0.56
SMAD4-211ENST00000590499 IRF2BP2Q7Z5L9 587 aa11.58□□□□□ -0.56
SMAD4-211ENST00000590499 CHSY1Q86X52 802 aa11.58□□□□□ -0.56
SMAD4-211ENST00000590499 PHF13Q86YI8 300 aaPredicted RBP11.58□□□□□ -0.56
SMAD4-211ENST00000590499 MFN1Q8IWA4 741 aa11.58□□□□□ -0.56
SMAD4-211ENST00000590499 LGI2Q8N0V4 545 aa11.58□□□□□ -0.56
SMAD4-211ENST00000590499 CFAP52Q8N1V2 620 aa11.58□□□□□ -0.56
SMAD4-211ENST00000590499 ZNF557Q8N988 423 aaPredicted RBP11.58□□□□□ -0.56
SMAD4-211ENST00000590499 SLC30A5Q8TAD4 765 aa11.58□□□□□ -0.56
SMAD4-211ENST00000590499 UCMAQ8WVF2 138 aa11.58□□□□□ -0.56
SMAD4-211ENST00000590499 AGPAT1Q99943 283 aa11.58□□□□□ -0.56
SMAD4-211ENST00000590499 HINFPQ9BQA5 517 aa11.58□□□□□ -0.56
SMAD4-211ENST00000590499 C11orf70Q9BRQ4 267 aa11.58□□□□□ -0.56
SMAD4-211ENST00000590499 CIPCQ9C0C6 399 aa11.58□□□□□ -0.56
SMAD4-211ENST00000590499 ARHGEF38Q9NXL2 777 aa11.58□□□□□ -0.56
SMAD4-211ENST00000590499 COX16Q9P0S2 106 aa11.58□□□□□ -0.56
SMAD4-211ENST00000590499 STIM2Q9P246 746 aa11.58□□□□□ -0.56
SMAD4-211ENST00000590499 INTS6Q9UL03 887 aaKnown RBP11.58□□□□□ -0.56
SMAD4-211ENST00000590499 STAP1Q9ULZ2 295 aa11.58□□□□□ -0.56
SMAD4-211ENST00000590499 TCRBV5S1A1TA0A578 114 aa11.57□□□□□ -0.56
SMAD4-211ENST00000590499 TYW5A2RUC4 315 aaKnown RBP11.57□□□□□ -0.56
SMAD4-211ENST00000590499 F5H5T6 163 aa11.57□□□□□ -0.56
SMAD4-211ENST00000590499 GOLGA8SH3BPF8 625 aa11.57□□□□□ -0.56
SMAD4-211ENST00000590499 PAGE1O75459 146 aa11.57□□□□□ -0.56
SMAD4-211ENST00000590499 ADCY5O95622 1261 aa11.57□□□□□ -0.56
SMAD4-211ENST00000590499 FERP16591 822 aa11.57□□□□□ -0.56
SMAD4-211ENST00000590499 ABCB4P21439 1286 aa11.57□□□□□ -0.56
SMAD4-211ENST00000590499 PBX1P40424 430 aa11.57□□□□□ -0.56
SMAD4-211ENST00000590499 SULT1E1P49888 294 aa11.57□□□□□ -0.56
SMAD4-211ENST00000590499 RNASE9P60153 205 aaKnown RBP11.57□□□□□ -0.56
SMAD4-211ENST00000590499 ARID5AQ03989 594 aa11.57□□□□□ -0.56
SMAD4-211ENST00000590499 MTA1Q13330 715 aa11.57□□□□□ -0.56
SMAD4-211ENST00000590499 E2F5Q15329 346 aa11.57□□□□□ -0.56
SMAD4-211ENST00000590499 SKOR2Q2VWA4 1001 aaPredicted RBP11.57□□□□□ -0.56
SMAD4-211ENST00000590499 C5orf22Q49AR2 442 aa11.57□□□□□ -0.56
SMAD4-211ENST00000590499 BRMS1LQ5PSV4 323 aa11.57□□□□□ -0.56
SMAD4-211ENST00000590499 E4F1Q66K89 784 aaPredicted RBP11.57□□□□□ -0.56
SMAD4-211ENST00000590499 MBLAC2Q68D91 279 aa11.57□□□□□ -0.56
SMAD4-211ENST00000590499 FBXL22Q6P050 247 aa11.57□□□□□ -0.56
SMAD4-211ENST00000590499 MON1BQ7L1V2 547 aa11.57□□□□□ -0.56
SMAD4-211ENST00000590499 LYSMD3Q7Z3D4 306 aa11.57□□□□□ -0.56
SMAD4-211ENST00000590499 C11orf74Q86VG3 221 aa11.57□□□□□ -0.56
SMAD4-211ENST00000590499 KIAA2013Q8IYS2 634 aa11.57□□□□□ -0.56
SMAD4-211ENST00000590499 ZNF683Q8IZ20 524 aa11.57□□□□□ -0.56
SMAD4-211ENST00000590499 FRMD1Q8N878 549 aa11.57□□□□□ -0.56
SMAD4-211ENST00000590499 CYB5D2Q8WUJ1 264 aa11.57□□□□□ -0.56
SMAD4-211ENST00000590499 RLN3Q8WXF3 142 aa11.57□□□□□ -0.56
SMAD4-211ENST00000590499 TTC17Q96AE7 1141 aa11.57□□□□□ -0.56
SMAD4-211ENST00000590499 MYO19Q96H55 970 aa11.57□□□□□ -0.56
SMAD4-211ENST00000590499 MRGPRX1Q96LB2 322 aa11.57□□□□□ -0.56
SMAD4-211ENST00000590499 TBCBQ99426 244 aa11.57□□□□□ -0.56
SMAD4-211ENST00000590499 TMEM245Q9H330 911 aa11.57□□□□□ -0.56
SMAD4-211ENST00000590499 METTL5Q9NRN9 209 aaKnown RBP11.57□□□□□ -0.56
SMAD4-211ENST00000590499 BCCIPQ9P287 314 aaKnown RBP eCLIP11.57□□□□□ -0.56
SMAD4-211ENST00000590499 SLC12A6Q9UHW9 1150 aa11.57□□□□□ -0.56
SMAD4-211ENST00000590499 MBD1Q9UIS9 605 aaPredicted RBP11.57□□□□□ -0.56
SMAD4-211ENST00000590499 INVSQ9Y283 1065 aa11.57□□□□□ -0.56
SMAD4-211ENST00000590499 PCDHB11Q9Y5F2 797 aa11.57□□□□□ -0.56
SMAD4-211ENST00000590499 HS3ST4Q9Y661 456 aa11.57□□□□□ -0.56
SMAD4-211ENST00000590499 NUMA1Q14980 2115 aa11.57□□□□□ -0.56
SMAD4-211ENST00000590499 A0A1B0GVM2 712 aa11.56□□□□□ -0.56
SMAD4-211ENST00000590499 TCAF2A6NFQ2 919 aa11.56□□□□□ -0.56
SMAD4-211ENST00000590499 C2CD4BA6NLJ0 364 aa11.56□□□□□ -0.56
SMAD4-211ENST00000590499 LRRC53A6NM62 1247 aa11.56□□□□□ -0.56
SMAD4-211ENST00000590499 ENDOD1O94919 500 aa11.56□□□□□ -0.56
SMAD4-211ENST00000590499 F9P00740 461 aa11.56□□□□□ -0.56
SMAD4-211ENST00000590499 DLDP09622 509 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms