RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 EIF4EBP2Q13542 120 aaPredicted RBP10.71□□□□□ -0.69
SDF2-208ENST00000589788 STARD3Q14849 445 aa10.71□□□□□ -0.69
SDF2-208ENST00000589788 USP39Q53GS9 565 aaKnown RBP10.71□□□□□ -0.69
SDF2-208ENST00000589788 FIGNQ5HY92 759 aa10.71□□□□□ -0.69
SDF2-208ENST00000589788 BRMS1LQ5PSV4 323 aa10.71□□□□□ -0.69
SDF2-208ENST00000589788 RABGAP1LQ5R372 815 aa10.71□□□□□ -0.69
SDF2-208ENST00000589788 COX20Q5RI15 118 aa10.71□□□□□ -0.69
SDF2-208ENST00000589788 TTC39BQ5VTQ0 682 aaPredicted RBP10.71□□□□□ -0.69
SDF2-208ENST00000589788 PPP1R2P3Q6NXS1 205 aa10.71□□□□□ -0.69
SDF2-208ENST00000589788 CHST9Q7L1S5 443 aa10.71□□□□□ -0.69
SDF2-208ENST00000589788 ARCQ7LC44 396 aa10.71□□□□□ -0.69
SDF2-208ENST00000589788 AHI1Q8N157 1196 aa10.71□□□□□ -0.69
SDF2-208ENST00000589788 LINC00528Q8N1L1 170 aa10.71□□□□□ -0.69
SDF2-208ENST00000589788 CFAP52Q8N1V2 620 aa10.71□□□□□ -0.69
SDF2-208ENST00000589788 EMC1Q8N766 993 aa10.71□□□□□ -0.69
SDF2-208ENST00000589788 SUMF1Q8NBK3 374 aa10.71□□□□□ -0.69
SDF2-208ENST00000589788 HMGB4Q8WW32 186 aa10.71□□□□□ -0.69
SDF2-208ENST00000589788 GAB3Q8WWW8 586 aa10.71□□□□□ -0.69
SDF2-208ENST00000589788 NT5C3BQ969T7 300 aa10.71□□□□□ -0.69
SDF2-208ENST00000589788 IQCDQ96DY2 449 aa10.71□□□□□ -0.69
SDF2-208ENST00000589788 PGAP3Q96FM1 320 aaPredicted RBP10.71□□□□□ -0.69
SDF2-208ENST00000589788 MYO19Q96H55 970 aa10.71□□□□□ -0.69
SDF2-208ENST00000589788 INSM2Q96T92 566 aaPredicted RBP10.71□□□□□ -0.69
SDF2-208ENST00000589788 ACOX2Q99424 681 aa10.71□□□□□ -0.69
SDF2-208ENST00000589788 TBCBQ99426 244 aa10.71□□□□□ -0.69
SDF2-208ENST00000589788 GRIP2Q9C0E4 1043 aa10.71□□□□□ -0.69
SDF2-208ENST00000589788 WDCPQ9H6R7 721 aa10.71□□□□□ -0.69
SDF2-208ENST00000589788 PIGVQ9NUD9 493 aa10.71□□□□□ -0.69
SDF2-208ENST00000589788 ELOVL2Q9NXB9 296 aa10.71□□□□□ -0.69
SDF2-208ENST00000589788 CACNA2D2Q9NY47 1150 aa10.71□□□□□ -0.69
SDF2-208ENST00000589788 AIPL1Q9NZN9 384 aa10.71□□□□□ -0.69
SDF2-208ENST00000589788 NCDNQ9UBB6 729 aa10.71□□□□□ -0.69
SDF2-208ENST00000589788 GGA2Q9UJY4 613 aa10.71□□□□□ -0.69
SDF2-208ENST00000589788 TMEM59LQ9UK28 342 aa10.71□□□□□ -0.69
SDF2-208ENST00000589788 ANKRD62A6NC57 917 aa10.7□□□□□ -0.7
SDF2-208ENST00000589788 H0Y626 953 aa10.7□□□□□ -0.7
SDF2-208ENST00000589788 SYNCRIPO60506 623 aaKnown RBP10.7□□□□□ -0.7
SDF2-208ENST00000589788 PAGE1O75459 146 aa10.7□□□□□ -0.7
SDF2-208ENST00000589788 LUC7L3O95232 432 aaKnown RBP10.7□□□□□ -0.7
SDF2-208ENST00000589788 ATP5BP06576 529 aaKnown RBP10.7□□□□□ -0.7
SDF2-208ENST00000589788 KRT3P12035 628 aa10.7□□□□□ -0.7
SDF2-208ENST00000589788 PDGFRAP16234 1089 aa10.7□□□□□ -0.7
SDF2-208ENST00000589788 POLR2EP19388 210 aaKnown RBP10.7□□□□□ -0.7
SDF2-208ENST00000589788 TFE3P19532 575 aaPredicted RBP10.7□□□□□ -0.7
SDF2-208ENST00000589788 CDC25BP30305 580 aa10.7□□□□□ -0.7
SDF2-208ENST00000589788 SDC4P31431 198 aa10.7□□□□□ -0.7
SDF2-208ENST00000589788 GPC1P35052 558 aa10.7□□□□□ -0.7
SDF2-208ENST00000589788 RDXP35241 583 aaKnown RBP10.7□□□□□ -0.7
SDF2-208ENST00000589788 PBX1P40424 430 aa10.7□□□□□ -0.7
SDF2-208ENST00000589788 CXCR3P49682 368 aa10.7□□□□□ -0.7
SDF2-208ENST00000589788 ATP11AP98196 1134 aa10.7□□□□□ -0.7
SDF2-208ENST00000589788 KLHL30Q0D2K2 578 aa10.7□□□□□ -0.7
SDF2-208ENST00000589788 AUHQ13825 339 aaKnown RBP10.7□□□□□ -0.7
SDF2-208ENST00000589788 LPAL2Q16609 132 aa10.7□□□□□ -0.7
SDF2-208ENST00000589788 OTUD1Q5VV17 481 aaPredicted RBP10.7□□□□□ -0.7
SDF2-208ENST00000589788 LAIR1Q6GTX8 287 aa10.7□□□□□ -0.7
SDF2-208ENST00000589788 ACAD10Q6JQN1 1059 aa10.7□□□□□ -0.7
SDF2-208ENST00000589788 DNAJC24Q6P3W2 148 aa10.7□□□□□ -0.7
SDF2-208ENST00000589788 SERPINA13PQ6UXR4 307 aa10.7□□□□□ -0.7
SDF2-208ENST00000589788 MON1BQ7L1V2 547 aa10.7□□□□□ -0.7
SDF2-208ENST00000589788 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.7□□□□□ -0.7
SDF2-208ENST00000589788 RASSF3Q86WH2 238 aa10.7□□□□□ -0.7
SDF2-208ENST00000589788 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.7□□□□□ -0.7
SDF2-208ENST00000589788 MDGA1Q8NFP4 955 aa10.7□□□□□ -0.7
SDF2-208ENST00000589788 FIBINQ8TAL6 211 aa10.7□□□□□ -0.7
SDF2-208ENST00000589788 CPLX3Q8WVH0 158 aa10.7□□□□□ -0.7
SDF2-208ENST00000589788 RXFP2Q8WXD0 754 aa10.7□□□□□ -0.7
SDF2-208ENST00000589788 SORCS1Q8WY21 1168 aa10.7□□□□□ -0.7
SDF2-208ENST00000589788 RUBCNQ92622 972 aa10.7□□□□□ -0.7
SDF2-208ENST00000589788 CFAP57Q96MR6 1250 aa10.7□□□□□ -0.7
SDF2-208ENST00000589788 RPRD1AQ96P16 312 aaPredicted RBP10.7□□□□□ -0.7
SDF2-208ENST00000589788 GABRG3Q99928 467 aa10.7□□□□□ -0.7
SDF2-208ENST00000589788 SELENOOQ9BVL4 669 aa10.7□□□□□ -0.7
SDF2-208ENST00000589788 TPSD1Q9BZJ3 242 aa10.7□□□□□ -0.7
SDF2-208ENST00000589788 TTYH3Q9C0H2 523 aa10.7□□□□□ -0.7
SDF2-208ENST00000589788 TKTL2Q9H0I9 626 aa10.7□□□□□ -0.7
SDF2-208ENST00000589788 SIK2Q9H0K1 926 aa10.7□□□□□ -0.7
SDF2-208ENST00000589788 HAUS4Q9H6D7 363 aa10.7□□□□□ -0.7
SDF2-208ENST00000589788 THAP10Q9P2Z0 257 aaPredicted RBP10.7□□□□□ -0.7
SDF2-208ENST00000589788 GMEB2Q9UKD1 530 aa10.7□□□□□ -0.7
SDF2-208ENST00000589788 HCN2Q9UL51 889 aa10.7□□□□□ -0.7
SDF2-208ENST00000589788 PLA2G4CQ9UP65 541 aa10.7□□□□□ -0.7
SDF2-208ENST00000589788 STON1Q9Y6Q2 735 aa10.7□□□□□ -0.7
SDF2-208ENST00000589788 EML5Q05BV3 1969 aa10.7□□□□□ -0.7
SDF2-208ENST00000589788 A0A1W2PQJ5 194 aa10.69□□□□□ -0.7
SDF2-208ENST00000589788 SERTM1A2A2V5 107 aa10.69□□□□□ -0.7
SDF2-208ENST00000589788 TMCO5BA8MYB1 307 aa10.69□□□□□ -0.7
SDF2-208ENST00000589788 CAPN5O15484 640 aaPredicted RBP10.69□□□□□ -0.7
SDF2-208ENST00000589788 MOCS3O95396 460 aa10.69□□□□□ -0.7
SDF2-208ENST00000589788 MPSTP25325 297 aa10.69□□□□□ -0.7
SDF2-208ENST00000589788 CD70P32970 193 aa10.69□□□□□ -0.7
SDF2-208ENST00000589788 PRKCIP41743 596 aa10.69□□□□□ -0.7
SDF2-208ENST00000589788 RNF144AP50876 292 aaPredicted RBP10.69□□□□□ -0.7
SDF2-208ENST00000589788 GSCP56915 257 aaPredicted RBP10.69□□□□□ -0.7
SDF2-208ENST00000589788 ZBED6P86452 979 aa10.69□□□□□ -0.7
SDF2-208ENST00000589788 PTP4A2Q12974 167 aa10.69□□□□□ -0.7
SDF2-208ENST00000589788 ZNF234Q14588 700 aa10.69□□□□□ -0.7
SDF2-208ENST00000589788 CDO1Q16878 200 aa10.69□□□□□ -0.7
SDF2-208ENST00000589788 FNDC3BQ53EP0 1204 aaKnown RBP10.69□□□□□ -0.7
SDF2-208ENST00000589788 TDRD12Q587J7 1177 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms