RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 IL22Q9GZX6 179 aa10.64□□□□□ -0.71
VPS25-203ENST00000589520 SIK2Q9H0K1 926 aa10.64□□□□□ -0.71
VPS25-203ENST00000589520 KDM4CQ9H3R0 1056 aa10.64□□□□□ -0.71
VPS25-203ENST00000589520 NMUR1Q9HB89 426 aa10.64□□□□□ -0.71
VPS25-203ENST00000589520 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.64□□□□□ -0.71
VPS25-203ENST00000589520 HAUS2Q9NVX0 235 aa10.64□□□□□ -0.71
VPS25-203ENST00000589520 MKS1Q9NXB0 559 aa10.64□□□□□ -0.71
VPS25-203ENST00000589520 NSMCE4AQ9NXX6 385 aa10.64□□□□□ -0.71
VPS25-203ENST00000589520 MTRRQ9UBK8 725 aa10.64□□□□□ -0.71
VPS25-203ENST00000589520 SFMBT1Q9UHJ3 866 aa10.64□□□□□ -0.71
VPS25-203ENST00000589520 HBS1LQ9Y450 684 aaKnown RBP10.64□□□□□ -0.71
VPS25-203ENST00000589520 MFHAS1Q9Y4C4 1052 aa10.64□□□□□ -0.71
VPS25-203ENST00000589520 USP15Q9Y4E8 981 aaPredicted RBP10.64□□□□□ -0.71
VPS25-203ENST00000589520 IGLV3-10A0A075B6K4 115 aa10.63□□□□□ -0.71
VPS25-203ENST00000589520 FAM237BA0A1B0GVD1 139 aa10.63□□□□□ -0.71
VPS25-203ENST00000589520 ARHGAP42A6NI28 874 aa10.63□□□□□ -0.71
VPS25-203ENST00000589520 DRGXA6NNA5 263 aa10.63□□□□□ -0.71
VPS25-203ENST00000589520 TCP11X1B4DZS4 312 aa10.63□□□□□ -0.71
VPS25-203ENST00000589520 E9PAM4 449 aa10.63□□□□□ -0.71
VPS25-203ENST00000589520 SNX3O60493 162 aa10.63□□□□□ -0.71
VPS25-203ENST00000589520 LPXNO60711 386 aa10.63□□□□□ -0.71
VPS25-203ENST00000589520 USP1O94782 785 aa10.63□□□□□ -0.71
VPS25-203ENST00000589520 EFEMP2O95967 443 aa10.63□□□□□ -0.71
VPS25-203ENST00000589520 GEMP55040 296 aa10.63□□□□□ -0.71
VPS25-203ENST00000589520 WDR4P57081 412 aaKnown RBP10.63□□□□□ -0.71
VPS25-203ENST00000589520 TNK2Q07912 1038 aa10.63□□□□□ -0.71
VPS25-203ENST00000589520 FAAP100Q0VG06 881 aa10.63□□□□□ -0.71
VPS25-203ENST00000589520 CDH17Q12864 832 aa10.63□□□□□ -0.71
VPS25-203ENST00000589520 HNRNPDQ14103 355 aaKnown RBP10.63□□□□□ -0.71
VPS25-203ENST00000589520 MTFR1Q15390 333 aa10.63□□□□□ -0.71
VPS25-203ENST00000589520 DDR2Q16832 855 aa10.63□□□□□ -0.71
VPS25-203ENST00000589520 MGAT5BQ3V5L5 792 aa10.63□□□□□ -0.71
VPS25-203ENST00000589520 LACTB2Q53H82 288 aaPredicted RBP10.63□□□□□ -0.71
VPS25-203ENST00000589520 GRTP1Q5TC63 336 aa10.63□□□□□ -0.71
VPS25-203ENST00000589520 CASC4Q6P4E1 433 aa10.63□□□□□ -0.71
VPS25-203ENST00000589520 KLHDC10Q6PID8 442 aa10.63□□□□□ -0.71
VPS25-203ENST00000589520 NPWQ8N729 165 aa10.63□□□□□ -0.71
VPS25-203ENST00000589520 ATAD1Q8NBU5 361 aa10.63□□□□□ -0.71
VPS25-203ENST00000589520 MGARPQ8TDB4 240 aa10.63□□□□□ -0.71
VPS25-203ENST00000589520 PTCD2Q8WV60 388 aaKnown RBP10.63□□□□□ -0.71
VPS25-203ENST00000589520 DPF3Q92784 378 aa10.63□□□□□ -0.71
VPS25-203ENST00000589520 AZIN2Q96A70 460 aa10.63□□□□□ -0.71
VPS25-203ENST00000589520 APOPT1Q96IL0 206 aa10.63□□□□□ -0.71
VPS25-203ENST00000589520 IL12RB2Q99665 862 aa10.63□□□□□ -0.71
VPS25-203ENST00000589520 PITPNM3Q9BZ71 974 aa10.63□□□□□ -0.71
VPS25-203ENST00000589520 IQCGQ9H095 443 aaKnown RBP10.63□□□□□ -0.71
VPS25-203ENST00000589520 ENTPD7Q9NQZ7 604 aa10.63□□□□□ -0.71
VPS25-203ENST00000589520 TMEM248Q9NWD8 314 aa10.63□□□□□ -0.71
VPS25-203ENST00000589520 AFF4Q9UHB7 1163 aaKnown RBP10.63□□□□□ -0.71
VPS25-203ENST00000589520 STARD13Q9Y3M8 1113 aa10.63□□□□□ -0.71
VPS25-203ENST00000589520 HS3ST4Q9Y661 456 aa10.63□□□□□ -0.71
VPS25-203ENST00000589520 CEP290O15078 2479 aa10.63□□□□□ -0.71
VPS25-203ENST00000589520 A0A1W2PPM1 405 aa10.62□□□□□ -0.71
VPS25-203ENST00000589520 KCNK1O00180 336 aa10.62□□□□□ -0.71
VPS25-203ENST00000589520 COPEO14579 308 aa10.62□□□□□ -0.71
VPS25-203ENST00000589520 ZBTB24O43167 697 aaPredicted RBP10.62□□□□□ -0.71
VPS25-203ENST00000589520 SPAG7O75391 227 aa10.62□□□□□ -0.71
VPS25-203ENST00000589520 NEBLO76041 1014 aa10.62□□□□□ -0.71
VPS25-203ENST00000589520 IL1BP01584 269 aa10.62□□□□□ -0.71
VPS25-203ENST00000589520 JCHAINP01591 159 aa10.62□□□□□ -0.71
VPS25-203ENST00000589520 CCNB1P14635 433 aa10.62□□□□□ -0.71
VPS25-203ENST00000589520 TAC1P20366 129 aa10.62□□□□□ -0.71
VPS25-203ENST00000589520 CD68P34810 354 aaPredicted RBP10.62□□□□□ -0.71
VPS25-203ENST00000589520 RPA3P35244 121 aaPredicted RBP10.62□□□□□ -0.71
VPS25-203ENST00000589520 HADHAP40939 763 aa10.62□□□□□ -0.71
VPS25-203ENST00000589520 POLD2P49005 469 aa10.62□□□□□ -0.71
VPS25-203ENST00000589520 MAPKAPK2P49137 400 aa10.62□□□□□ -0.71
VPS25-203ENST00000589520 RENBPP51606 427 aa10.62□□□□□ -0.71
VPS25-203ENST00000589520 YBEYP58557 167 aaPredicted RBP10.62□□□□□ -0.71
VPS25-203ENST00000589520 MGAT5Q09328 741 aa10.62□□□□□ -0.71
VPS25-203ENST00000589520 TAF10Q12962 218 aa10.62□□□□□ -0.71
VPS25-203ENST00000589520 LRRC14Q15048 493 aa10.62□□□□□ -0.71
VPS25-203ENST00000589520 SH2D5Q6ZV89 423 aa10.62□□□□□ -0.71
VPS25-203ENST00000589520 CTU1Q7Z7A3 348 aaKnown RBP10.62□□□□□ -0.71
VPS25-203ENST00000589520 TMEM135Q86UB9 458 aa10.62□□□□□ -0.71
VPS25-203ENST00000589520 CHSY1Q86X52 802 aa10.62□□□□□ -0.71
VPS25-203ENST00000589520 ARHGAP12Q8IWW6 846 aa10.62□□□□□ -0.71
VPS25-203ENST00000589520 RNF168Q8IYW5 571 aaPredicted RBP10.62□□□□□ -0.71
VPS25-203ENST00000589520 C4orf33Q8N1A6 199 aa10.62□□□□□ -0.71
VPS25-203ENST00000589520 AGGF1Q8N302 714 aaeCLIP10.62□□□□□ -0.71
VPS25-203ENST00000589520 FBXO22Q8NEZ5 403 aa10.62□□□□□ -0.71
VPS25-203ENST00000589520 GABPB2Q8TAK5 448 aaPredicted RBP10.62□□□□□ -0.71
VPS25-203ENST00000589520 ZSCAN18Q8TBC5 510 aaPredicted RBP10.62□□□□□ -0.71
VPS25-203ENST00000589520 RAB3IL1Q8TBN0 382 aa10.62□□□□□ -0.71
VPS25-203ENST00000589520 DEPDC1BQ8WUY9 529 aa10.62□□□□□ -0.71
VPS25-203ENST00000589520 ARNTL2Q8WYA1 636 aa10.62□□□□□ -0.71
VPS25-203ENST00000589520 ATP2A3Q93084 1043 aa10.62□□□□□ -0.71
VPS25-203ENST00000589520 MRRFQ96E11 262 aaKnown RBP10.62□□□□□ -0.71
VPS25-203ENST00000589520 IGSF21Q96ID5 467 aa10.62□□□□□ -0.71
VPS25-203ENST00000589520 SEPT5Q99719 369 aaPredicted RBP10.62□□□□□ -0.71
VPS25-203ENST00000589520 CPNE1Q99829 537 aa10.62□□□□□ -0.71
VPS25-203ENST00000589520 SLC39A8Q9C0K1 460 aa10.62□□□□□ -0.71
VPS25-203ENST00000589520 RABEP2Q9H5N1 569 aa10.62□□□□□ -0.71
VPS25-203ENST00000589520 VPS45Q9NRW7 570 aa10.62□□□□□ -0.71
VPS25-203ENST00000589520 MARCH2Q9P0N8 246 aa10.62□□□□□ -0.71
VPS25-203ENST00000589520 GMIPQ9P107 970 aa10.62□□□□□ -0.71
VPS25-203ENST00000589520 KLHL14Q9P2G3 628 aa10.62□□□□□ -0.71
VPS25-203ENST00000589520 TXNDC16Q9P2K2 825 aa10.62□□□□□ -0.71
VPS25-203ENST00000589520 VANGL2Q9ULK5 521 aa10.62□□□□□ -0.71
VPS25-203ENST00000589520 NEU3Q9UQ49 428 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms