RNA–Protein interactions for RNA: ENST00000589445.1

R3HDM4-205, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 705 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-205ENST00000589445 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.06■■□□□ 1.28
R3HDM4-205ENST00000589445 RTL3Q8N8U3 475 aaKnown RBP23.06■■□□□ 1.28
R3HDM4-205ENST00000589445 KCTD6Q8NC69 237 aa23.06■■□□□ 1.28
R3HDM4-205ENST00000589445 OR52K2Q8NGK3 314 aa23.06■■□□□ 1.28
R3HDM4-205ENST00000589445 RPLP0P6Q8NHW5 317 aa23.06■■□□□ 1.28
R3HDM4-205ENST00000589445 KIAA1524Q8TCG1 905 aa23.06■■□□□ 1.28
R3HDM4-205ENST00000589445 OSBPL6Q9BZF3 934 aa23.06■■□□□ 1.28
R3HDM4-205ENST00000589445 TMEM248Q9NWD8 314 aa23.06■■□□□ 1.28
R3HDM4-205ENST00000589445 VPS28Q9UK41 221 aa23.06■■□□□ 1.28
R3HDM4-205ENST00000589445 WDFY4Q6ZS81 3184 aa23.06■■□□□ 1.28
R3HDM4-205ENST00000589445 ANTXRLA6NF34 631 aa23.05■■□□□ 1.28
R3HDM4-205ENST00000589445 PI15O43692 258 aa23.05■■□□□ 1.28
R3HDM4-205ENST00000589445 FTCDO95954 541 aa23.05■■□□□ 1.28
R3HDM4-205ENST00000589445 CD48P09326 243 aa23.05■■□□□ 1.28
R3HDM4-205ENST00000589445 MZF1P28698 734 aaPredicted RBP23.05■■□□□ 1.28
R3HDM4-205ENST00000589445 MARCKSL1P49006 195 aa23.05■■□□□ 1.28
R3HDM4-205ENST00000589445 ZNF135P52742 658 aaPredicted RBP23.05■■□□□ 1.28
R3HDM4-205ENST00000589445 OXCT1P55809 520 aa23.05■■□□□ 1.28
R3HDM4-205ENST00000589445 EIF4HQ15056 248 aaKnown RBP23.05■■□□□ 1.28
R3HDM4-205ENST00000589445 FBXO43Q4G163 708 aa23.05■■□□□ 1.28
R3HDM4-205ENST00000589445 EGFLAMQ63HQ2 1017 aa23.05■■□□□ 1.28
R3HDM4-205ENST00000589445 MBLAC2Q68D91 279 aa23.05■■□□□ 1.28
R3HDM4-205ENST00000589445 NLRP14Q86W24 1093 aa23.05■■□□□ 1.28
R3HDM4-205ENST00000589445 ZNF354CQ86Y25 554 aa23.05■■□□□ 1.28
R3HDM4-205ENST00000589445 SYCE1Q8N0S2 351 aa23.05■■□□□ 1.28
R3HDM4-205ENST00000589445 ZNF513Q8N8E2 541 aaPredicted RBP23.05■■□□□ 1.28
R3HDM4-205ENST00000589445 SORCS1Q8WY21 1168 aa23.05■■□□□ 1.28
R3HDM4-205ENST00000589445 CSPG4P5Q96PW8 444 aa23.05■■□□□ 1.28
R3HDM4-205ENST00000589445 CWC15Q9P013 229 aaKnown RBP23.05■■□□□ 1.28
R3HDM4-205ENST00000589445 CHD5Q8TDI0 1954 aa23.04■■□□□ 1.28
R3HDM4-205ENST00000589445 POLR2EP19388 210 aaKnown RBP23.04■■□□□ 1.28
R3HDM4-205ENST00000589445 TNFRSF4P43489 277 aa23.04■■□□□ 1.28
R3HDM4-205ENST00000589445 CLCN5P51795 746 aa23.04■■□□□ 1.28
R3HDM4-205ENST00000589445 MMRN1Q13201 1228 aa23.04■■□□□ 1.28
R3HDM4-205ENST00000589445 DPYSL3Q14195 570 aa23.04■■□□□ 1.28
R3HDM4-205ENST00000589445 PLEKHG6Q3KR16 790 aa23.04■■□□□ 1.28
R3HDM4-205ENST00000589445 PEX26Q7Z412 305 aa23.04■■□□□ 1.28
R3HDM4-205ENST00000589445 SETD3Q86TU7 594 aaPredicted RBP23.04■■□□□ 1.28
R3HDM4-205ENST00000589445 APCDD1Q8J025 514 aa23.04■■□□□ 1.28
R3HDM4-205ENST00000589445 TMEM105Q8N8V8 129 aa23.04■■□□□ 1.28
R3HDM4-205ENST00000589445 LRRC57Q8N9N7 239 aa23.04■■□□□ 1.28
R3HDM4-205ENST00000589445 CYB5D2Q8WUJ1 264 aa23.04■■□□□ 1.28
R3HDM4-205ENST00000589445 UCMAQ8WVF2 138 aa23.04■■□□□ 1.28
R3HDM4-205ENST00000589445 ALS2CR12Q96Q35 445 aa23.04■■□□□ 1.28
R3HDM4-205ENST00000589445 NDFIP2Q9NV92 336 aa23.04■■□□□ 1.28
R3HDM4-205ENST00000589445 DDX56Q9NY93 547 aaKnown RBP23.04■■□□□ 1.28
R3HDM4-205ENST00000589445 ZNF212Q9UDV6 495 aa23.04■■□□□ 1.28
R3HDM4-205ENST00000589445 PYCARDQ9ULZ3 195 aa23.04■■□□□ 1.28
R3HDM4-205ENST00000589445 TBC1D30Q9Y2I9 924 aa23.04■■□□□ 1.28
R3HDM4-205ENST00000589445 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.04■■□□□ 1.28
R3HDM4-205ENST00000589445 ZSCAN12O43309 604 aa23.03■■□□□ 1.28
R3HDM4-205ENST00000589445 RAMP2O60895 175 aa23.03■■□□□ 1.28
R3HDM4-205ENST00000589445 DNA2P51530 1060 aa23.03■■□□□ 1.28
R3HDM4-205ENST00000589445 SLC12A1Q13621 1099 aa23.03■■□□□ 1.28
R3HDM4-205ENST00000589445 DPYSQ14117 519 aa23.03■■□□□ 1.28
R3HDM4-205ENST00000589445 PDK2Q15119 407 aa23.03■■□□□ 1.28
R3HDM4-205ENST00000589445 FNDC3BQ53EP0 1204 aaKnown RBP23.03■■□□□ 1.28
R3HDM4-205ENST00000589445 EMC10Q5UCC4 262 aa23.03■■□□□ 1.28
R3HDM4-205ENST00000589445 LRRC38Q5VT99 294 aa23.03■■□□□ 1.28
R3HDM4-205ENST00000589445 TMEM215Q68D42 235 aa23.03■■□□□ 1.28
R3HDM4-205ENST00000589445 BMP8AQ7Z5Y6 402 aa23.03■■□□□ 1.28
R3HDM4-205ENST00000589445 ADIPOR2Q86V24 386 aa23.03■■□□□ 1.28
R3HDM4-205ENST00000589445 MAP7D3Q8IWC1 876 aa23.03■■□□□ 1.28
R3HDM4-205ENST00000589445 CCDC33Q8N5R6 958 aa23.03■■□□□ 1.28
R3HDM4-205ENST00000589445 RNF10Q8N5U6 811 aaKnown RBP23.03■■□□□ 1.28
R3HDM4-205ENST00000589445 OR7D4Q8NG98 312 aa23.03■■□□□ 1.28
R3HDM4-205ENST00000589445 CCDC26Q8TAB7 109 aa23.03■■□□□ 1.28
R3HDM4-205ENST00000589445 RAPGEF5Q92565 580 aa23.03■■□□□ 1.28
R3HDM4-205ENST00000589445 KRT35Q92764 455 aa23.03■■□□□ 1.28
R3HDM4-205ENST00000589445 LMLNQ96KR4 655 aa23.03■■□□□ 1.28
R3HDM4-205ENST00000589445 SPON2Q9BUD6 331 aa23.03■■□□□ 1.28
R3HDM4-205ENST00000589445 CHRDQ9H2X0 955 aa23.03■■□□□ 1.28
R3HDM4-205ENST00000589445 ELOVL2Q9NXB9 296 aa23.03■■□□□ 1.28
R3HDM4-205ENST00000589445 INTS6Q9UL03 887 aaKnown RBP23.03■■□□□ 1.28
R3HDM4-205ENST00000589445 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.03■■□□□ 1.28
R3HDM4-205ENST00000589445 KLF8O95600 359 aaPredicted RBP23.02■■□□□ 1.28
R3HDM4-205ENST00000589445 ERCC2P18074 760 aa23.02■■□□□ 1.28
R3HDM4-205ENST00000589445 WASP42768 502 aa23.02■■□□□ 1.28
R3HDM4-205ENST00000589445 GNA12Q03113 381 aa23.02■■□□□ 1.28
R3HDM4-205ENST00000589445 DMC1Q14565 340 aa23.02■■□□□ 1.28
R3HDM4-205ENST00000589445 PKN3Q6P5Z2 889 aa23.02■■□□□ 1.28
R3HDM4-205ENST00000589445 TMCO3Q6UWJ1 677 aa23.02■■□□□ 1.28
R3HDM4-205ENST00000589445 CCDC50Q8IVM0 306 aa23.02■■□□□ 1.28
R3HDM4-205ENST00000589445 CHPFQ8IZ52 775 aa23.02■■□□□ 1.28
R3HDM4-205ENST00000589445 SYNPOQ8N3V7 929 aa23.02■■□□□ 1.28
R3HDM4-205ENST00000589445 ALLCQ8N6M5 410 aa23.02■■□□□ 1.28
R3HDM4-205ENST00000589445 USP33Q8TEY7 942 aa23.02■■□□□ 1.28
R3HDM4-205ENST00000589445 ACDQ96AP0 544 aa23.02■■□□□ 1.28
R3HDM4-205ENST00000589445 CLDN23Q96B33 292 aa23.02■■□□□ 1.28
R3HDM4-205ENST00000589445 RNF25Q96BH1 459 aaPredicted RBP23.02■■□□□ 1.28
R3HDM4-205ENST00000589445 ZNF670Q9BS34 389 aa23.02■■□□□ 1.28
R3HDM4-205ENST00000589445 ATP13A1Q9HD20 1204 aa23.02■■□□□ 1.28
R3HDM4-205ENST00000589445 TRMT1Q9NXH9 659 aaKnown RBP23.02■■□□□ 1.28
R3HDM4-205ENST00000589445 RCOR3Q9P2K3 495 aaPredicted RBP23.02■■□□□ 1.28
R3HDM4-205ENST00000589445 AMFRQ9UKV5 643 aa23.02■■□□□ 1.28
R3HDM4-205ENST00000589445 PACSIN2Q9UNF0 486 aaPredicted RBP23.02■■□□□ 1.28
R3HDM4-205ENST00000589445 MFHAS1Q9Y4C4 1052 aa23.02■■□□□ 1.28
R3HDM4-205ENST00000589445 SHROOM3Q8TF72 1996 aa23.01■■□□□ 1.27
R3HDM4-205ENST00000589445 A0A0D9SEW6 157 aa23.01■■□□□ 1.27
R3HDM4-205ENST00000589445 ILVBLA1L0T0 632 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms