RNA–Protein interactions for RNA: ENST00000588200.1

PKN1-211, Transcript of protein kinase N1, human

TSL 3

Gene PKN1, Length 548 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKN1-211	ENST00000588200	SNX11	Q9Y5W9	270 aa		13.77	□□□□□ -0.21
PKN1-211	ENST00000588200	TP53BP1	Q12888	1972 aa	Predicted RBP	13.76	□□□□□ -0.21
PKN1-211	ENST00000588200	TTC34	A8MYJ7	566 aa		13.76	□□□□□ -0.21
PKN1-211	ENST00000588200	MID1	O15344	667 aa		13.76	□□□□□ -0.21
PKN1-211	ENST00000588200	SLC7A4	O43246	635 aa		13.76	□□□□□ -0.21
PKN1-211	ENST00000588200	LAT	O43561	262 aa		13.76	□□□□□ -0.21
PKN1-211	ENST00000588200	MOCS2	O96007	188 aa	Predicted RBP	13.76	□□□□□ -0.21
PKN1-211	ENST00000588200	ABCB4	P21439	1286 aa		13.76	□□□□□ -0.21
PKN1-211	ENST00000588200	SLC8A1	P32418	973 aa		13.76	□□□□□ -0.21
PKN1-211	ENST00000588200	CDH5	P33151	784 aa	Predicted RBP	13.76	□□□□□ -0.21
PKN1-211	ENST00000588200	NOS2	P35228	1153 aa		13.76	□□□□□ -0.21
PKN1-211	ENST00000588200	NUDT1	P36639	197 aa		13.76	□□□□□ -0.21
PKN1-211	ENST00000588200	SCNN1A	P37088	669 aa		13.76	□□□□□ -0.21
PKN1-211	ENST00000588200	CTSO	P43234	321 aa	Predicted RBP	13.76	□□□□□ -0.21
PKN1-211	ENST00000588200	CCT8	P50990	548 aa		13.76	□□□□□ -0.21
PKN1-211	ENST00000588200	PITX1	P78337	314 aa	Predicted RBP	13.76	□□□□□ -0.21
PKN1-211	ENST00000588200	PTK2	Q05397	1052 aa		13.76	□□□□□ -0.21
PKN1-211	ENST00000588200	TAF5	Q15542	800 aa		13.76	□□□□□ -0.21
PKN1-211	ENST00000588200	RAP1GAP2	Q684P5	730 aa		13.76	□□□□□ -0.21
PKN1-211	ENST00000588200	CXorf57	Q6NSI4	855 aa	Known RBP	13.76	□□□□□ -0.21
PKN1-211	ENST00000588200	DPY19L2P1	Q6NXN4	242 aa		13.76	□□□□□ -0.21
PKN1-211	ENST00000588200	OLFML1	Q6UWY5	402 aa		13.76	□□□□□ -0.21
PKN1-211	ENST00000588200	MMS22L	Q6ZRQ5	1243 aa		13.76	□□□□□ -0.21
PKN1-211	ENST00000588200	C11orf57	Q6ZUT1	292 aa	Predicted RBP	13.76	□□□□□ -0.21
PKN1-211	ENST00000588200	SND1	Q7KZF4	910 aa	Known RBP eCLIP	13.76	□□□□□ -0.21
PKN1-211	ENST00000588200	CHSY1	Q86X52	802 aa		13.76	□□□□□ -0.21
PKN1-211	ENST00000588200	DHX40	Q8IX18	779 aa	Known RBP	13.76	□□□□□ -0.21
PKN1-211	ENST00000588200	APCDD1	Q8J025	514 aa		13.76	□□□□□ -0.21
PKN1-211	ENST00000588200	DEFB106A	Q8N104	65 aa		13.76	□□□□□ -0.21
PKN1-211	ENST00000588200	C1orf131	Q8NDD1	294 aa	Known RBP	13.76	□□□□□ -0.21
PKN1-211	ENST00000588200	RHBDD1	Q8TEB9	315 aa		13.76	□□□□□ -0.21
PKN1-211	ENST00000588200	SETD7	Q8WTS6	366 aa	Known RBP	13.76	□□□□□ -0.21
PKN1-211	ENST00000588200	SKA1	Q96BD8	255 aa		13.76	□□□□□ -0.21
PKN1-211	ENST00000588200	SPAG5	Q96R06	1193 aa		13.76	□□□□□ -0.21
PKN1-211	ENST00000588200	CRACR2A	Q9BSW2	395 aa		13.76	□□□□□ -0.21
PKN1-211	ENST00000588200	NEUROG2	Q9H2A3	272 aa		13.76	□□□□□ -0.21
PKN1-211	ENST00000588200	MTG2	Q9H4K7	406 aa		13.76	□□□□□ -0.21
PKN1-211	ENST00000588200	SIX2	Q9NPC8	291 aa		13.76	□□□□□ -0.21
PKN1-211	ENST00000588200	SERGEF	Q9UGK8	458 aa		13.76	□□□□□ -0.21
PKN1-211	ENST00000588200	TBC1D30	Q9Y2I9	924 aa		13.76	□□□□□ -0.21
PKN1-211	ENST00000588200	OR51B4	Q9Y5P0	310 aa		13.76	□□□□□ -0.21
PKN1-211	ENST00000588200	ZFYVE26	Q68DK2	2539 aa		13.76	□□□□□ -0.21
PKN1-211	ENST00000588200		A0A1B0GTQ1	180 aa		13.75	□□□□□ -0.21
PKN1-211	ENST00000588200		A0A1W2PR77	199 aa		13.75	□□□□□ -0.21
PKN1-211	ENST00000588200	ALOX15B	O15296	676 aa		13.75	□□□□□ -0.21
PKN1-211	ENST00000588200	YKT6	O15498	198 aa		13.75	□□□□□ -0.21
PKN1-211	ENST00000588200	TNFSF14	O43557	240 aa		13.75	□□□□□ -0.21
PKN1-211	ENST00000588200	ATP9B	O43861	1147 aa		13.75	□□□□□ -0.21
PKN1-211	ENST00000588200	FSBP	O95073	299 aa		13.75	□□□□□ -0.21
PKN1-211	ENST00000588200	CLCN1	P35523	988 aa		13.75	□□□□□ -0.21
PKN1-211	ENST00000588200	GABRB2	P47870	512 aa		13.75	□□□□□ -0.21
PKN1-211	ENST00000588200	BPIFB4	P59827	614 aa		13.75	□□□□□ -0.21
PKN1-211	ENST00000588200	SLC6A3	Q01959	620 aa		13.75	□□□□□ -0.21
PKN1-211	ENST00000588200	KCNJ12	Q14500	433 aa		13.75	□□□□□ -0.21
PKN1-211	ENST00000588200	CT47A1	Q5JQC4	288 aa	Predicted RBP	13.75	□□□□□ -0.21
PKN1-211	ENST00000588200	RNF219	Q5W0B1	726 aa	Predicted RBP	13.75	□□□□□ -0.21
PKN1-211	ENST00000588200	FBXL22	Q6P050	247 aa		13.75	□□□□□ -0.21
PKN1-211	ENST00000588200	GJB7	Q6PEY0	223 aa		13.75	□□□□□ -0.21
PKN1-211	ENST00000588200	NCEH1	Q6PIU2	408 aa		13.75	□□□□□ -0.21
PKN1-211	ENST00000588200	MMAA	Q8IVH4	418 aa	Known RBP	13.75	□□□□□ -0.21
PKN1-211	ENST00000588200	FAM71A	Q8IYT1	594 aa		13.75	□□□□□ -0.21
PKN1-211	ENST00000588200	AADAT	Q8N5Z0	425 aa		13.75	□□□□□ -0.21
PKN1-211	ENST00000588200	SNX19	Q92543	992 aa		13.75	□□□□□ -0.21
PKN1-211	ENST00000588200	OMD	Q99983	421 aa		13.75	□□□□□ -0.21
PKN1-211	ENST00000588200	ACE2	Q9BYF1	805 aa	Predicted RBP	13.75	□□□□□ -0.21
PKN1-211	ENST00000588200	ERVMER34-1	Q9H9K5	563 aa		13.75	□□□□□ -0.21
PKN1-211	ENST00000588200	EBF2	Q9HAK2	575 aa		13.75	□□□□□ -0.21
PKN1-211	ENST00000588200	DDIT4	Q9NX09	232 aa		13.75	□□□□□ -0.21
PKN1-211	ENST00000588200		A0A1W2PP55	124 aa		13.74	□□□□□ -0.21
PKN1-211	ENST00000588200		E9PAM4	449 aa		13.74	□□□□□ -0.21
PKN1-211	ENST00000588200		H0Y8X5	98 aa		13.74	□□□□□ -0.21
PKN1-211	ENST00000588200	TAF4	O00268	1085 aa		13.74	□□□□□ -0.21
PKN1-211	ENST00000588200	CLDN11	O75508	207 aa		13.74	□□□□□ -0.21
PKN1-211	ENST00000588200	RNASEH2A	O75792	299 aa	Known RBP	13.74	□□□□□ -0.21
PKN1-211	ENST00000588200	CDK4	P11802	303 aa		13.74	□□□□□ -0.21
PKN1-211	ENST00000588200	MZF1	P28698	734 aa	Predicted RBP	13.74	□□□□□ -0.21
PKN1-211	ENST00000588200	CD38	P28907	300 aa		13.74	□□□□□ -0.21
PKN1-211	ENST00000588200	DRD3	P35462	400 aa		13.74	□□□□□ -0.21
PKN1-211	ENST00000588200	RXRG	P48443	463 aa		13.74	□□□□□ -0.21
PKN1-211	ENST00000588200	ADPRH	P54922	357 aa		13.74	□□□□□ -0.21
PKN1-211	ENST00000588200	AUH	Q13825	339 aa	Known RBP	13.74	□□□□□ -0.21
PKN1-211	ENST00000588200	MAN2A1	Q16706	1144 aa		13.74	□□□□□ -0.21
PKN1-211	ENST00000588200	ARHGAP44	Q17R89	818 aa		13.74	□□□□□ -0.21
PKN1-211	ENST00000588200	INAVA	Q3KP66	663 aa		13.74	□□□□□ -0.21
PKN1-211	ENST00000588200	BRMS1L	Q5PSV4	323 aa		13.74	□□□□□ -0.21
PKN1-211	ENST00000588200	ARC	Q7LC44	396 aa		13.74	□□□□□ -0.21
PKN1-211	ENST00000588200	DSG4	Q86SJ6	1040 aa		13.74	□□□□□ -0.21
PKN1-211	ENST00000588200	IQCH	Q86VS3	1027 aa		13.74	□□□□□ -0.21
PKN1-211	ENST00000588200	GALNT15	Q8N3T1	639 aa		13.74	□□□□□ -0.21
PKN1-211	ENST00000588200	RPL10L	Q96L21	214 aa	Known RBP	13.74	□□□□□ -0.21
PKN1-211	ENST00000588200	C1orf74	Q96LT6	269 aa		13.74	□□□□□ -0.21
PKN1-211	ENST00000588200	NPY6R	Q99463	290 aa		13.74	□□□□□ -0.21
PKN1-211	ENST00000588200	ELF4	Q99607	663 aa	Predicted RBP	13.74	□□□□□ -0.21
PKN1-211	ENST00000588200	FEM1A	Q9BSK4	669 aa		13.74	□□□□□ -0.21
PKN1-211	ENST00000588200	ARHGEF38	Q9NXL2	777 aa		13.74	□□□□□ -0.21
PKN1-211	ENST00000588200	DMTF1	Q9Y222	760 aa		13.74	□□□□□ -0.21
PKN1-211	ENST00000588200	PCDHGA1	Q9Y5H4	931 aa		13.74	□□□□□ -0.21
PKN1-211	ENST00000588200	KNTC1	P50748	2209 aa		13.74	□□□□□ -0.21
PKN1-211	ENST00000588200	ACACA	Q13085	2346 aa		13.73	□□□□□ -0.21
PKN1-211	ENST00000588200	DOCK4	Q8N1I0	1966 aa		13.73	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 307.7 ms