RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 MFN1Q8IWA4 741 aa17.25■□□□□ 0.35
PRKCSH-205ENST00000587327 PLD6Q8N2A8 252 aaKnown RBP17.25■□□□□ 0.35
PRKCSH-205ENST00000587327 NDRG1Q92597 394 aaKnown RBP17.25■□□□□ 0.35
PRKCSH-205ENST00000587327 FAM149B1Q96BN6 582 aa17.25■□□□□ 0.35
PRKCSH-205ENST00000587327 CCDC124Q96CT7 223 aaKnown RBP17.25■□□□□ 0.35
PRKCSH-205ENST00000587327 PARK7Q99497 189 aaKnown RBP17.25■□□□□ 0.35
PRKCSH-205ENST00000587327 EIF2AQ9BY44 585 aaKnown RBP17.25■□□□□ 0.35
PRKCSH-205ENST00000587327 VCX3BQ9H321 246 aa17.25■□□□□ 0.35
PRKCSH-205ENST00000587327 ABHD16BQ9H3Z7 469 aa17.25■□□□□ 0.35
PRKCSH-205ENST00000587327 GJD2Q9UKL4 321 aa17.25■□□□□ 0.35
PRKCSH-205ENST00000587327 ZNF236Q9UL36 1845 aa17.25■□□□□ 0.35
PRKCSH-205ENST00000587327 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.24■□□□□ 0.35
PRKCSH-205ENST00000587327 PRDX6P30041 224 aa17.24■□□□□ 0.35
PRKCSH-205ENST00000587327 SERPINB8P50452 374 aa17.24■□□□□ 0.35
PRKCSH-205ENST00000587327 USP4Q13107 963 aa17.24■□□□□ 0.35
PRKCSH-205ENST00000587327 PAFAH1B3Q15102 231 aaKnown RBP17.24■□□□□ 0.35
PRKCSH-205ENST00000587327 DGKDQ16760 1214 aa17.24■□□□□ 0.35
PRKCSH-205ENST00000587327 LRRC36Q1X8D7 754 aa17.24■□□□□ 0.35
PRKCSH-205ENST00000587327 FSCBQ5H9T9 825 aa17.24■□□□□ 0.35
PRKCSH-205ENST00000587327 FBXO47Q5MNV8 452 aa17.24■□□□□ 0.35
PRKCSH-205ENST00000587327 OTUD1Q5VV17 481 aaPredicted RBP17.24■□□□□ 0.35
PRKCSH-205ENST00000587327 FSTL4Q6MZW2 842 aa17.24■□□□□ 0.35
PRKCSH-205ENST00000587327 ACAD11Q709F0 780 aa17.24■□□□□ 0.35
PRKCSH-205ENST00000587327 STRA8Q7Z7C7 330 aa17.24■□□□□ 0.35
PRKCSH-205ENST00000587327 FBXW8Q8N3Y1 598 aa17.24■□□□□ 0.35
PRKCSH-205ENST00000587327 OR52K1Q8NGK4 314 aa17.24■□□□□ 0.35
PRKCSH-205ENST00000587327 NT5C3BQ969T7 300 aa17.24■□□□□ 0.35
PRKCSH-205ENST00000587327 PGLYRP2Q96PD5 576 aa17.24■□□□□ 0.35
PRKCSH-205ENST00000587327 KLHL4Q9C0H6 718 aa17.24■□□□□ 0.35
PRKCSH-205ENST00000587327 CDH19Q9H159 772 aa17.24■□□□□ 0.35
PRKCSH-205ENST00000587327 LRRC40Q9H9A6 602 aa17.24■□□□□ 0.35
PRKCSH-205ENST00000587327 RNF19AQ9NV58 838 aa17.24■□□□□ 0.35
PRKCSH-205ENST00000587327 SETD4Q9NVD3 440 aa17.24■□□□□ 0.35
PRKCSH-205ENST00000587327 ARHGAP26Q9UNA1 814 aa17.24■□□□□ 0.35
PRKCSH-205ENST00000587327 KPNA7A9QM74 516 aa17.23■□□□□ 0.35
PRKCSH-205ENST00000587327 CREB3O43889 395 aa17.23■□□□□ 0.35
PRKCSH-205ENST00000587327 COX4I1P13073 169 aa17.23■□□□□ 0.35
PRKCSH-205ENST00000587327 LIMK2P53671 638 aa17.23■□□□□ 0.35
PRKCSH-205ENST00000587327 PITX1P78337 314 aaPredicted RBP17.23■□□□□ 0.35
PRKCSH-205ENST00000587327 XIAPP98170 497 aa17.23■□□□□ 0.35
PRKCSH-205ENST00000587327 OLIG2Q13516 323 aa17.23■□□□□ 0.35
PRKCSH-205ENST00000587327 METTL21CQ5VZV1 264 aa17.23■□□□□ 0.35
PRKCSH-205ENST00000587327 SPRYD7Q5W111 196 aa17.23■□□□□ 0.35
PRKCSH-205ENST00000587327 LPCAT4Q643R3 524 aa17.23■□□□□ 0.35
PRKCSH-205ENST00000587327 NAPRTQ6XQN6 538 aa17.23■□□□□ 0.35
PRKCSH-205ENST00000587327 TMEM135Q86UB9 458 aa17.23■□□□□ 0.35
PRKCSH-205ENST00000587327 HPS6Q86YV9 775 aa17.23■□□□□ 0.35
PRKCSH-205ENST00000587327 ZNF781Q8N8C0 355 aa17.23■□□□□ 0.35
PRKCSH-205ENST00000587327 ATXN7L3BQ96GX2 97 aa17.23■□□□□ 0.35
PRKCSH-205ENST00000587327 OXCT2Q9BYC2 517 aaPredicted RBP17.23■□□□□ 0.35
PRKCSH-205ENST00000587327 ADAMTS10Q9H324 1103 aa17.23■□□□□ 0.35
PRKCSH-205ENST00000587327 SNX25Q9H3E2 840 aa17.23■□□□□ 0.35
PRKCSH-205ENST00000587327 G3V2L1 256 aa17.23■□□□□ 0.35
PRKCSH-205ENST00000587327 KCNK1O00180 336 aa17.23■□□□□ 0.35
PRKCSH-205ENST00000587327 PIRO00625 290 aa17.23■□□□□ 0.35
PRKCSH-205ENST00000587327 SPTLC1O15269 473 aa17.23■□□□□ 0.35
PRKCSH-205ENST00000587327 ZBTB14O43829 449 aa17.23■□□□□ 0.35
PRKCSH-205ENST00000587327 POLE2P56282 527 aa17.23■□□□□ 0.35
PRKCSH-205ENST00000587327 TMEM62Q0P6H9 643 aa17.23■□□□□ 0.35
PRKCSH-205ENST00000587327 ADIGQ0VDE8 80 aa17.23■□□□□ 0.35
PRKCSH-205ENST00000587327 TBL3Q12788 808 aaKnown RBP17.23■□□□□ 0.35
PRKCSH-205ENST00000587327 PEX6Q13608 980 aa17.23■□□□□ 0.35
PRKCSH-205ENST00000587327 CUL3Q13618 768 aa17.23■□□□□ 0.35
PRKCSH-205ENST00000587327 DPYSQ14117 519 aa17.23■□□□□ 0.35
PRKCSH-205ENST00000587327 SFT2D3Q587I9 215 aa17.23■□□□□ 0.35
PRKCSH-205ENST00000587327 CFAP157Q5JU67 520 aa17.23■□□□□ 0.35
PRKCSH-205ENST00000587327 ZNF618Q5T7W0 954 aa17.23■□□□□ 0.35
PRKCSH-205ENST00000587327 BNIPLQ7Z465 357 aa17.23■□□□□ 0.35
PRKCSH-205ENST00000587327 PIGZQ86VD9 579 aa17.23■□□□□ 0.35
PRKCSH-205ENST00000587327 TP53INP2Q8IXH6 220 aa17.23■□□□□ 0.35
PRKCSH-205ENST00000587327 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.23■□□□□ 0.35
PRKCSH-205ENST00000587327 PPP1R13LQ8WUF5 828 aa17.23■□□□□ 0.35
PRKCSH-205ENST00000587327 AGAP2Q99490 1192 aa17.23■□□□□ 0.35
PRKCSH-205ENST00000587327 MAN1C1Q9NR34 630 aa17.23■□□□□ 0.35
PRKCSH-205ENST00000587327 GINS2Q9Y248 185 aa17.23■□□□□ 0.35
PRKCSH-205ENST00000587327 SYNJ2BP-COX16A0A087WUM0 186 aa17.22■□□□□ 0.35
PRKCSH-205ENST00000587327 XPO1O14980 1071 aaKnown RBP17.22■□□□□ 0.35
PRKCSH-205ENST00000587327 DAB1O75553 588 aa17.22■□□□□ 0.35
PRKCSH-205ENST00000587327 HSPA4LO95757 839 aa17.22■□□□□ 0.35
PRKCSH-205ENST00000587327 MPOP05164 745 aa17.22■□□□□ 0.35
PRKCSH-205ENST00000587327 MTTPP55157 894 aa17.22■□□□□ 0.35
PRKCSH-205ENST00000587327 FKBP1BP68106 108 aa17.22■□□□□ 0.35
PRKCSH-205ENST00000587327 TCHHL1Q5QJ38 904 aaPredicted RBP17.22■□□□□ 0.35
PRKCSH-205ENST00000587327 CLEC14AQ86T13 490 aa17.22■□□□□ 0.35
PRKCSH-205ENST00000587327 GDPD5Q8WTR4 605 aa17.22■□□□□ 0.35
PRKCSH-205ENST00000587327 ZNF669Q96BR6 464 aaPredicted RBP17.22■□□□□ 0.35
PRKCSH-205ENST00000587327 AGAP3Q96P47 875 aa17.22■□□□□ 0.35
PRKCSH-205ENST00000587327 NPY6RQ99463 290 aa17.22■□□□□ 0.35
PRKCSH-205ENST00000587327 GORASP1Q9BQQ3 440 aa17.22■□□□□ 0.35
PRKCSH-205ENST00000587327 FAM49AQ9H0Q0 323 aaPredicted RBP17.22■□□□□ 0.35
PRKCSH-205ENST00000587327 GDAP2Q9NXN4 497 aa17.22■□□□□ 0.35
PRKCSH-205ENST00000587327 COX16Q9P0S2 106 aa17.22■□□□□ 0.35
PRKCSH-205ENST00000587327 VANGL2Q9ULK5 521 aa17.22■□□□□ 0.35
PRKCSH-205ENST00000587327 UBQLN1Q9UMX0 589 aaKnown RBP17.22■□□□□ 0.35
PRKCSH-205ENST00000587327 A0A096LPK6 155 aa17.22■□□□□ 0.35
PRKCSH-205ENST00000587327 ZCWPW2A0A1B0GU75 182 aa17.22■□□□□ 0.35
PRKCSH-205ENST00000587327 TMEM114B3SHH9 223 aa17.22■□□□□ 0.35
PRKCSH-205ENST00000587327 E9PBE3 544 aa17.22■□□□□ 0.35
PRKCSH-205ENST00000587327 KLHL41O60662 606 aa17.22■□□□□ 0.35
PRKCSH-205ENST00000587327 USP12O75317 370 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms