RNA–Protein interactions for RNA: ENST00000587171.1

H3F3B-205, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-205ENST00000587171 JAM2P57087 298 aa13.58□□□□□ -0.24
H3F3B-205ENST00000587171 RNASE9P60153 205 aaKnown RBP13.58□□□□□ -0.24
H3F3B-205ENST00000587171 POLR2FP61218 127 aaKnown RBP13.58□□□□□ -0.24
H3F3B-205ENST00000587171 MYL5Q02045 173 aa13.58□□□□□ -0.24
H3F3B-205ENST00000587171 SULT2A1Q06520 285 aa13.58□□□□□ -0.24
H3F3B-205ENST00000587171 STX1AQ16623 288 aa13.58□□□□□ -0.24
H3F3B-205ENST00000587171 SLC25A52Q3SY17 297 aa13.58□□□□□ -0.24
H3F3B-205ENST00000587171 C2CD6Q53TS8 623 aa13.58□□□□□ -0.24
H3F3B-205ENST00000587171 BRMS1LQ5PSV4 323 aa13.58□□□□□ -0.24
H3F3B-205ENST00000587171 FKBP15Q5T1M5 1219 aa13.58□□□□□ -0.24
H3F3B-205ENST00000587171 FAM102AQ5T9C2 384 aaPredicted RBP13.58□□□□□ -0.24
H3F3B-205ENST00000587171 RNF219Q5W0B1 726 aaPredicted RBP13.58□□□□□ -0.24
H3F3B-205ENST00000587171 SASS6Q6UVJ0 657 aa13.58□□□□□ -0.24
H3F3B-205ENST00000587171 USP30Q70CQ3 517 aa13.58□□□□□ -0.24
H3F3B-205ENST00000587171 DHX40Q8IX18 779 aaKnown RBP13.58□□□□□ -0.24
H3F3B-205ENST00000587171 MSANTD4Q8NCY6 345 aa13.58□□□□□ -0.24
H3F3B-205ENST00000587171 OR2I1PQ8NGU4 316 aa13.58□□□□□ -0.24
H3F3B-205ENST00000587171 ALG14Q96F25 216 aa13.58□□□□□ -0.24
H3F3B-205ENST00000587171 RPL10LQ96L21 214 aaKnown RBP13.58□□□□□ -0.24
H3F3B-205ENST00000587171 MIR1-1HGQ9H1L0 117 aa13.58□□□□□ -0.24
H3F3B-205ENST00000587171 PABPC3Q9H361 631 aaKnown RBP13.58□□□□□ -0.24
H3F3B-205ENST00000587171 WDCPQ9H6R7 721 aa13.58□□□□□ -0.24
H3F3B-205ENST00000587171 SGK2Q9HBY8 427 aa13.58□□□□□ -0.24
H3F3B-205ENST00000587171 ANLNQ9NQW6 1124 aa13.58□□□□□ -0.24
H3F3B-205ENST00000587171 FAM207AQ9NSI2 230 aaPredicted RBP13.58□□□□□ -0.24
H3F3B-205ENST00000587171 TMEM51Q9NW97 253 aa13.58□□□□□ -0.24
H3F3B-205ENST00000587171 SIK3Q9Y2K2 1263 aa13.58□□□□□ -0.24
H3F3B-205ENST00000587171 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.58□□□□□ -0.24
H3F3B-205ENST00000587171 PLXNA2O75051 1894 aa13.58□□□□□ -0.24
H3F3B-205ENST00000587171 ZZEF1O43149 2961 aa13.58□□□□□ -0.24
H3F3B-205ENST00000587171 CHD5Q8TDI0 1954 aa13.58□□□□□ -0.24
H3F3B-205ENST00000587171 CFAP47Q6ZTR5 3102 aa13.57□□□□□ -0.24
H3F3B-205ENST00000587171 DOCK9Q9BZ29 2069 aa13.57□□□□□ -0.24
H3F3B-205ENST00000587171 FREM2Q5SZK8 3169 aa13.57□□□□□ -0.24
H3F3B-205ENST00000587171 RNASEH1O60930 286 aaKnown RBP13.57□□□□□ -0.24
H3F3B-205ENST00000587171 CLDN11O75508 207 aa13.57□□□□□ -0.24
H3F3B-205ENST00000587171 GFPT2O94808 682 aa13.57□□□□□ -0.24
H3F3B-205ENST00000587171 F9P00740 461 aa13.57□□□□□ -0.24
H3F3B-205ENST00000587171 CD59P13987 128 aa13.57□□□□□ -0.24
H3F3B-205ENST00000587171 NUMBP49757 651 aa13.57□□□□□ -0.24
H3F3B-205ENST00000587171 STK19P49842 368 aaPredicted RBP13.57□□□□□ -0.24
H3F3B-205ENST00000587171 VASPP50552 380 aaPredicted RBP13.57□□□□□ -0.24
H3F3B-205ENST00000587171 COPB1P53618 953 aaKnown RBP13.57□□□□□ -0.24
H3F3B-205ENST00000587171 CDR2Q01850 454 aa13.57□□□□□ -0.24
H3F3B-205ENST00000587171 SLC14A1Q13336 389 aa13.57□□□□□ -0.24
H3F3B-205ENST00000587171 CST6Q15828 149 aa13.57□□□□□ -0.24
H3F3B-205ENST00000587171 NAA35Q5VZE5 725 aa13.57□□□□□ -0.24
H3F3B-205ENST00000587171 TRNP1Q6NT89 227 aa13.57□□□□□ -0.24
H3F3B-205ENST00000587171 ARCQ7LC44 396 aa13.57□□□□□ -0.24
H3F3B-205ENST00000587171 BNIPLQ7Z465 357 aa13.57□□□□□ -0.24
H3F3B-205ENST00000587171 C14orf80Q86SX3 495 aa13.57□□□□□ -0.24
H3F3B-205ENST00000587171 ZNF683Q8IZ20 524 aa13.57□□□□□ -0.24
H3F3B-205ENST00000587171 OR52K2Q8NGK3 314 aa13.57□□□□□ -0.24
H3F3B-205ENST00000587171 SLC20A1Q8WUM9 679 aa13.57□□□□□ -0.24
H3F3B-205ENST00000587171 CPA5Q8WXQ8 436 aa13.57□□□□□ -0.24
H3F3B-205ENST00000587171 PTPRN2Q92932 1015 aa13.57□□□□□ -0.24
H3F3B-205ENST00000587171 PPP1R9BQ96SB3 815 aa13.57□□□□□ -0.24
H3F3B-205ENST00000587171 FAM129BQ96TA1 746 aa13.57□□□□□ -0.24
H3F3B-205ENST00000587171 TBCBQ99426 244 aa13.57□□□□□ -0.24
H3F3B-205ENST00000587171 FEM1AQ9BSK4 669 aa13.57□□□□□ -0.24
H3F3B-205ENST00000587171 TKTL2Q9H0I9 626 aa13.57□□□□□ -0.24
H3F3B-205ENST00000587171 SLC32A1Q9H598 525 aa13.57□□□□□ -0.24
H3F3B-205ENST00000587171 NLRC4Q9NPP4 1024 aa13.57□□□□□ -0.24
H3F3B-205ENST00000587171 SERGEFQ9UGK8 458 aa13.57□□□□□ -0.24
H3F3B-205ENST00000587171 LIMA1Q9UHB6 759 aaKnown RBP13.57□□□□□ -0.24
H3F3B-205ENST00000587171 TMEM59LQ9UK28 342 aa13.57□□□□□ -0.24
H3F3B-205ENST00000587171 TBC1D30Q9Y2I9 924 aa13.57□□□□□ -0.24
H3F3B-205ENST00000587171 PAXBP1Q9Y5B6 917 aa13.57□□□□□ -0.24
H3F3B-205ENST00000587171 OR51B4Q9Y5P0 310 aa13.57□□□□□ -0.24
H3F3B-205ENST00000587171 SLCO1B1Q9Y6L6 691 aa13.57□□□□□ -0.24
H3F3B-205ENST00000587171 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.56□□□□□ -0.24
H3F3B-205ENST00000587171 FAM170AA1A519 330 aa13.56□□□□□ -0.24
H3F3B-205ENST00000587171 LRRC10BA6NIK2 292 aa13.56□□□□□ -0.24
H3F3B-205ENST00000587171 LGALS16A8MUM7 142 aa13.56□□□□□ -0.24
H3F3B-205ENST00000587171 MID1O15344 667 aa13.56□□□□□ -0.24
H3F3B-205ENST00000587171 MBD3O95983 291 aa13.56□□□□□ -0.24
H3F3B-205ENST00000587171 CYP1A1P04798 512 aaPredicted RBP13.56□□□□□ -0.24
H3F3B-205ENST00000587171 ZNF18P17022 549 aa13.56□□□□□ -0.24
H3F3B-205ENST00000587171 SOX5P35711 763 aa13.56□□□□□ -0.24
H3F3B-205ENST00000587171 NNMTP40261 264 aa13.56□□□□□ -0.24
H3F3B-205ENST00000587171 CDH4P55283 916 aa13.56□□□□□ -0.24
H3F3B-205ENST00000587171 FMO1Q01740 532 aa13.56□□□□□ -0.24
H3F3B-205ENST00000587171 BNC1Q01954 994 aa13.56□□□□□ -0.24
H3F3B-205ENST00000587171 DEUP1Q05D60 604 aa13.56□□□□□ -0.24
H3F3B-205ENST00000587171 SFSWAPQ12872 951 aaKnown RBP13.56□□□□□ -0.24
H3F3B-205ENST00000587171 ZNF177Q13360 481 aaPredicted RBP13.56□□□□□ -0.24
H3F3B-205ENST00000587171 ELAVL3Q14576 367 aaKnown RBP13.56□□□□□ -0.24
H3F3B-205ENST00000587171 SND1Q7KZF4 910 aaKnown RBP eCLIP13.56□□□□□ -0.246e-27■□□□□ 9.2
H3F3B-205ENST00000587171 MMAAQ8IVH4 418 aaKnown RBP13.56□□□□□ -0.24
H3F3B-205ENST00000587171 STK40Q8N2I9 435 aa13.56□□□□□ -0.24
H3F3B-205ENST00000587171 FRS2Q8WU20 508 aa13.56□□□□□ -0.24
H3F3B-205ENST00000587171 SNX19Q92543 992 aa13.56□□□□□ -0.24
H3F3B-205ENST00000587171 BIRC7Q96CA5 298 aa13.56□□□□□ -0.24
H3F3B-205ENST00000587171 SIK2Q9H0K1 926 aa13.56□□□□□ -0.24
H3F3B-205ENST00000587171 HSD3B7Q9H2F3 369 aa13.56□□□□□ -0.24
H3F3B-205ENST00000587171 OSGEPQ9NPF4 335 aa13.56□□□□□ -0.24
H3F3B-205ENST00000587171 FBXL12Q9NXK8 326 aa13.56□□□□□ -0.24
H3F3B-205ENST00000587171 ADAMTS1Q9UHI8 967 aa13.56□□□□□ -0.24
H3F3B-205ENST00000587171 FZD4Q9ULV1 537 aa13.56□□□□□ -0.24
H3F3B-205ENST00000587171 WASF3Q9UPY6 502 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms