RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 CCR5P51681 352 aa19.98■□□□□ 0.79
TRAF4-216ENST00000586813 EIF4EBP2Q13542 120 aaPredicted RBP19.98■□□□□ 0.79
TRAF4-216ENST00000586813 SLC12A1Q13621 1099 aa19.98■□□□□ 0.79
TRAF4-216ENST00000586813 BECN1Q14457 450 aa19.98■□□□□ 0.79
TRAF4-216ENST00000586813 ELAVL3Q14576 367 aaKnown RBP19.98■□□□□ 0.79
TRAF4-216ENST00000586813 TAF5Q15542 800 aa19.98■□□□□ 0.79
TRAF4-216ENST00000586813 C19orf48Q6RUI8 117 aa19.98■□□□□ 0.79
TRAF4-216ENST00000586813 ENOSF1Q7L5Y1 443 aa19.98■□□□□ 0.79
TRAF4-216ENST00000586813 CIR1Q86X95 450 aaPredicted RBP19.98■□□□□ 0.79
TRAF4-216ENST00000586813 ATP6V0D2Q8N8Y2 350 aa19.98■□□□□ 0.79
TRAF4-216ENST00000586813 SKA1Q96BD8 255 aa19.98■□□□□ 0.79
TRAF4-216ENST00000586813 ELF4Q99607 663 aaPredicted RBP19.98■□□□□ 0.79
TRAF4-216ENST00000586813 SRRTQ9BXP5 876 aaKnown RBP19.98■□□□□ 0.79
TRAF4-216ENST00000586813 FAM204AQ9H8W3 233 aa19.98■□□□□ 0.79
TRAF4-216ENST00000586813 AASDHPPTQ9NRN7 309 aa19.98■□□□□ 0.79
TRAF4-216ENST00000586813 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.98■□□□□ 0.792e-6■□□□□ 11.3
TRAF4-216ENST00000586813 DKK4Q9UBT3 224 aa19.98■□□□□ 0.79
TRAF4-216ENST00000586813 GOLGA4Q13439 2230 aaKnown RBP19.98■□□□□ 0.79
TRAF4-216ENST00000586813 LOC400499M0QZD8 3231 aa19.97■□□□□ 0.79
TRAF4-216ENST00000586813 GOT1P17174 413 aa19.97■□□□□ 0.79
TRAF4-216ENST00000586813 MZF1P28698 734 aaPredicted RBP19.97■□□□□ 0.79
TRAF4-216ENST00000586813 NUMBP49757 651 aa19.97■□□□□ 0.79
TRAF4-216ENST00000586813 SMAD1Q15797 465 aaKnown RBP19.97■□□□□ 0.79
TRAF4-216ENST00000586813 CCDC157Q569K6 752 aa19.97■□□□□ 0.79
TRAF4-216ENST00000586813 TTC39BQ5VTQ0 682 aaPredicted RBP19.97■□□□□ 0.79
TRAF4-216ENST00000586813 SND1Q7KZF4 910 aaKnown RBP eCLIP19.97■□□□□ 0.79
TRAF4-216ENST00000586813 GATAD2AQ86YP4 633 aa19.97■□□□□ 0.79
TRAF4-216ENST00000586813 CCAR2Q8N163 923 aaKnown RBP19.97■□□□□ 0.79
TRAF4-216ENST00000586813 PRMT1Q99873 361 aaKnown RBP19.97■□□□□ 0.79
TRAF4-216ENST00000586813 RAXQ9Y2V3 346 aa19.97■□□□□ 0.79
TRAF4-216ENST00000586813 A0A1B0GVM2 712 aa19.96■□□□□ 0.79
TRAF4-216ENST00000586813 FAM149AA5PLN7 773 aa19.96■□□□□ 0.79
TRAF4-216ENST00000586813 TCAF2A6NFQ2 919 aa19.96■□□□□ 0.79
TRAF4-216ENST00000586813 WNT9AO14904 365 aa19.96■□□□□ 0.79
TRAF4-216ENST00000586813 IL1BP01584 269 aa19.96■□□□□ 0.79
TRAF4-216ENST00000586813 VAV1P15498 845 aa19.96■□□□□ 0.79
TRAF4-216ENST00000586813 PDGFRAP16234 1089 aa19.96■□□□□ 0.79
TRAF4-216ENST00000586813 CD38P28907 300 aa19.96■□□□□ 0.79
TRAF4-216ENST00000586813 NNMTP40261 264 aa19.96■□□□□ 0.79
TRAF4-216ENST00000586813 SHBQ15464 509 aa19.96■□□□□ 0.79
TRAF4-216ENST00000586813 PRAMEF14Q5SWL7 426 aa19.96■□□□□ 0.79
TRAF4-216ENST00000586813 GJB7Q6PEY0 223 aa19.96■□□□□ 0.79
TRAF4-216ENST00000586813 TRIM65Q6PJ69 517 aa19.96■□□□□ 0.79
TRAF4-216ENST00000586813 OR14C36Q8NHC7 312 aa19.96■□□□□ 0.79
TRAF4-216ENST00000586813 DDIT4Q9NX09 232 aa19.96■□□□□ 0.79
TRAF4-216ENST00000586813 SLC12A6Q9UHW9 1150 aa19.96■□□□□ 0.79
TRAF4-216ENST00000586813 TPX2Q9ULW0 747 aaKnown RBP19.96■□□□□ 0.79
TRAF4-216ENST00000586813 DOCK9Q9BZ29 2069 aa19.96■□□□□ 0.79
TRAF4-216ENST00000586813 A0A1W2PR77 199 aa19.95■□□□□ 0.78
TRAF4-216ENST00000586813 BECN2A8MW95 431 aa19.95■□□□□ 0.78
TRAF4-216ENST00000586813 SLC2A3P11169 496 aa19.95■□□□□ 0.78
TRAF4-216ENST00000586813 ABCB4P21439 1286 aa19.95■□□□□ 0.78
TRAF4-216ENST00000586813 DRD3P35462 400 aa19.95■□□□□ 0.78
TRAF4-216ENST00000586813 PLK1P53350 603 aa19.95■□□□□ 0.78
TRAF4-216ENST00000586813 PPP2CBP62714 309 aa19.95■□□□□ 0.78
TRAF4-216ENST00000586813 PPP2CAP67775 309 aa19.95■□□□□ 0.78
TRAF4-216ENST00000586813 CDK17Q00537 523 aa19.95■□□□□ 0.78
TRAF4-216ENST00000586813 SULT2A1Q06520 285 aa19.95■□□□□ 0.78
TRAF4-216ENST00000586813 CAMK2BQ13554 666 aa19.95■□□□□ 0.78
TRAF4-216ENST00000586813 COL28A1Q2UY09 1125 aa19.95■□□□□ 0.78
TRAF4-216ENST00000586813 RABGAP1LQ5R372 815 aa19.95■□□□□ 0.78
TRAF4-216ENST00000586813 CXorf57Q6NSI4 855 aaKnown RBP19.95■□□□□ 0.78
TRAF4-216ENST00000586813 DHRS13Q6UX07 377 aa19.95■□□□□ 0.78
TRAF4-216ENST00000586813 DEFB106AQ8N104 65 aa19.95■□□□□ 0.78
TRAF4-216ENST00000586813 FRS2Q8WU20 508 aa19.95■□□□□ 0.78
TRAF4-216ENST00000586813 SERAC1Q96JX3 654 aa19.95■□□□□ 0.78
TRAF4-216ENST00000586813 FAM81BQ96LP2 452 aa19.95■□□□□ 0.78
TRAF4-216ENST00000586813 SLC2A13Q96QE2 648 aa19.95■□□□□ 0.78
TRAF4-216ENST00000586813 SPAG5Q96R06 1193 aa19.95■□□□□ 0.78
TRAF4-216ENST00000586813 CPXM1Q96SM3 734 aa19.95■□□□□ 0.78
TRAF4-216ENST00000586813 CRACR2AQ9BSW2 395 aa19.95■□□□□ 0.78
TRAF4-216ENST00000586813 GDF3Q9NR23 364 aa19.95■□□□□ 0.78
TRAF4-216ENST00000586813 SYNJ2BP-COX16A0A087WUM0 186 aa19.94■□□□□ 0.78
TRAF4-216ENST00000586813 TRABD2BA6NFA1 517 aa19.94■□□□□ 0.78
TRAF4-216ENST00000586813 YKT6O15498 198 aa19.94■□□□□ 0.78
TRAF4-216ENST00000586813 LATO43561 262 aa19.94■□□□□ 0.78
TRAF4-216ENST00000586813 HSF2BPO75031 334 aa19.94■□□□□ 0.78
TRAF4-216ENST00000586813 FGFR1OPO95684 399 aaKnown RBP19.94■□□□□ 0.78
TRAF4-216ENST00000586813 GLI1P08151 1106 aa19.94■□□□□ 0.78
TRAF4-216ENST00000586813 CCR1P32246 355 aa19.94■□□□□ 0.78
TRAF4-216ENST00000586813 USP8P40818 1118 aa19.94■□□□□ 0.78
TRAF4-216ENST00000586813 METAP1P53582 386 aa19.94■□□□□ 0.78
TRAF4-216ENST00000586813 CENPCQ03188 943 aa19.94■□□□□ 0.78
TRAF4-216ENST00000586813 ARHGAP44Q17R89 818 aa19.94■□□□□ 0.78
TRAF4-216ENST00000586813 PDZD3Q86UT5 571 aa19.94■□□□□ 0.78
TRAF4-216ENST00000586813 SAP25Q8TEE9 199 aa19.94■□□□□ 0.78
TRAF4-216ENST00000586813 FAM131CQ96AQ9 280 aa19.94■□□□□ 0.78
TRAF4-216ENST00000586813 ASNSD1Q9NWL6 643 aa19.94■□□□□ 0.78
TRAF4-216ENST00000586813 COX16Q9P0S2 106 aa19.94■□□□□ 0.78
TRAF4-216ENST00000586813 ENC1O14682 589 aa19.93■□□□□ 0.78
TRAF4-216ENST00000586813 GADD45BO75293 160 aaPredicted RBP19.93■□□□□ 0.78
TRAF4-216ENST00000586813 ITGAVP06756 1048 aa19.93■□□□□ 0.78
TRAF4-216ENST00000586813 EPHA8P29322 1005 aaPredicted RBP19.93■□□□□ 0.78
TRAF4-216ENST00000586813 VASPP50552 380 aaPredicted RBP19.93■□□□□ 0.78
TRAF4-216ENST00000586813 OXCT1P55809 520 aa19.93■□□□□ 0.78
TRAF4-216ENST00000586813 NXPH1P58417 271 aa19.93■□□□□ 0.78
TRAF4-216ENST00000586813 CYP4F3Q08477 520 aa19.93■□□□□ 0.78
TRAF4-216ENST00000586813 FBXL22Q6P050 247 aa19.93■□□□□ 0.78
TRAF4-216ENST00000586813 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.93■□□□□ 0.78
TRAF4-216ENST00000586813 PASD1Q8IV76 773 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms