RNA–Protein interactions for RNA: ENST00000586704.5

TMEM259-205, Transcript of transmembrane protein 259, human

TSL 5

Gene TMEM259, Length 2,538 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM259-205	ENST00000586704	PGF	P49763	221 aa		18.42	■□□□□ 0.54
TMEM259-205	ENST00000586704	CBLB	Q13191	982 aa		18.42	■□□□□ 0.54
TMEM259-205	ENST00000586704	RNF220	Q5VTB9	566 aa		18.42	■□□□□ 0.54
TMEM259-205	ENST00000586704	SCG3	Q8WXD2	468 aa	Known RBP	18.42	■□□□□ 0.54
TMEM259-205	ENST00000586704	CELF6	Q96J87	481 aa	Known RBP	18.42	■□□□□ 0.54
TMEM259-205	ENST00000586704	GORASP1	Q9BQQ3	440 aa		18.42	■□□□□ 0.54
TMEM259-205	ENST00000586704	SPC25	Q9HBM1	224 aa		18.42	■□□□□ 0.54
TMEM259-205	ENST00000586704	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	18.42	■□□□□ 0.54	4e-7	■■■■■ 68.8
TMEM259-205	ENST00000586704	MOCS1	Q9NZB8	636 aa		18.42	■□□□□ 0.54
TMEM259-205	ENST00000586704	CPSF2	Q9P2I0	782 aa	Known RBP	18.42	■□□□□ 0.54
TMEM259-205	ENST00000586704	ZNF180	Q9UJW8	692 aa		18.42	■□□□□ 0.54
TMEM259-205	ENST00000586704	E2F8	A0AVK6	867 aa		18.42	■□□□□ 0.54
TMEM259-205	ENST00000586704	KPNA6	O60684	536 aa		18.42	■□□□□ 0.54
TMEM259-205	ENST00000586704	OPHN1	O60890	802 aa		18.42	■□□□□ 0.54
TMEM259-205	ENST00000586704	HAUS5	O94927	633 aa		18.42	■□□□□ 0.54
TMEM259-205	ENST00000586704	SEMA3B	Q13214	749 aa		18.42	■□□□□ 0.54
TMEM259-205	ENST00000586704	RCN2	Q14257	317 aa		18.42	■□□□□ 0.54
TMEM259-205	ENST00000586704	LPIN1	Q14693	890 aa		18.42	■□□□□ 0.54
TMEM259-205	ENST00000586704	KPNB1	Q14974	876 aa	Known RBP	18.42	■□□□□ 0.54
TMEM259-205	ENST00000586704	NDUFAF2	Q8N183	169 aa		18.42	■□□□□ 0.54
TMEM259-205	ENST00000586704	OR52K1	Q8NGK4	314 aa		18.42	■□□□□ 0.54
TMEM259-205	ENST00000586704	APOL2	Q9BQE5	337 aa		18.42	■□□□□ 0.54
TMEM259-205	ENST00000586704	NUDT5	Q9UKK9	219 aa		18.42	■□□□□ 0.54
TMEM259-205	ENST00000586704	SDR42E2	A6NKP2	422 aa		18.41	■□□□□ 0.54
TMEM259-205	ENST00000586704	STK10	O94804	968 aa	Known RBP	18.41	■□□□□ 0.54
TMEM259-205	ENST00000586704	SKI	P12755	728 aa		18.41	■□□□□ 0.54
TMEM259-205	ENST00000586704	PTPN3	P26045	913 aa		18.41	■□□□□ 0.54
TMEM259-205	ENST00000586704	SLC34A1	Q06495	639 aa		18.41	■□□□□ 0.54
TMEM259-205	ENST00000586704	TAC4	Q86UU9	113 aa		18.41	■□□□□ 0.54
TMEM259-205	ENST00000586704	PHC3	Q8NDX5	983 aa		18.41	■□□□□ 0.54
TMEM259-205	ENST00000586704	PRR11	Q96HE9	360 aa	Predicted RBP	18.41	■□□□□ 0.54
TMEM259-205	ENST00000586704	TUBB6	Q9BUF5	446 aa		18.41	■□□□□ 0.54
TMEM259-205	ENST00000586704	WDCP	Q9H6R7	721 aa		18.41	■□□□□ 0.54
TMEM259-205	ENST00000586704	UBP1	Q9NZI7	540 aa		18.41	■□□□□ 0.54
TMEM259-205	ENST00000586704	HEY2	Q9UBP5	337 aa		18.41	■□□□□ 0.54
TMEM259-205	ENST00000586704	SEPT4	O43236	478 aa		18.41	■□□□□ 0.54
TMEM259-205	ENST00000586704	KRT38	O76015	456 aa		18.41	■□□□□ 0.54
TMEM259-205	ENST00000586704	TOMM70	O94826	608 aa		18.41	■□□□□ 0.54
TMEM259-205	ENST00000586704	OR4Q2	P0C623	313 aa		18.41	■□□□□ 0.54
TMEM259-205	ENST00000586704	LRRC8B	Q6P9F7	803 aa		18.41	■□□□□ 0.54
TMEM259-205	ENST00000586704	LRRC74B	Q6ZQY2	392 aa		18.41	■□□□□ 0.54
TMEM259-205	ENST00000586704	NSL1	Q96IY1	281 aa		18.41	■□□□□ 0.54
TMEM259-205	ENST00000586704	SIK2	Q9H0K1	926 aa		18.41	■□□□□ 0.54
TMEM259-205	ENST00000586704	OR12D3	Q9UGF7	316 aa		18.41	■□□□□ 0.54
TMEM259-205	ENST00000586704	SCOC	Q9UIL1	159 aa		18.41	■□□□□ 0.54
TMEM259-205	ENST00000586704	PLLP	Q9Y342	182 aa		18.41	■□□□□ 0.54
TMEM259-205	ENST00000586704	ZBTB24	O43167	697 aa	Predicted RBP	18.4	■□□□□ 0.54
TMEM259-205	ENST00000586704	B4GALT3	O60512	393 aa		18.4	■□□□□ 0.54
TMEM259-205	ENST00000586704	PSMG1	O95456	288 aa		18.4	■□□□□ 0.54
TMEM259-205	ENST00000586704	SRGAP2B	P0DMP2	458 aa		18.4	■□□□□ 0.54
TMEM259-205	ENST00000586704	ERVK-10	P10266	1014 aa		18.4	■□□□□ 0.54
TMEM259-205	ENST00000586704	ODC1	P11926	461 aa		18.4	■□□□□ 0.54
TMEM259-205	ENST00000586704	PCSK1	P29120	753 aa		18.4	■□□□□ 0.54
TMEM259-205	ENST00000586704	ZBTB17	Q13105	803 aa		18.4	■□□□□ 0.54
TMEM259-205	ENST00000586704	MRPL10	Q7Z7H8	261 aa	Known RBP	18.4	■□□□□ 0.54
TMEM259-205	ENST00000586704	RNF217	Q8TC41	542 aa		18.4	■□□□□ 0.54
TMEM259-205	ENST00000586704	RNF34	Q969K3	372 aa		18.4	■□□□□ 0.54
TMEM259-205	ENST00000586704	PTCH2	Q9Y6C5	1203 aa		18.4	■□□□□ 0.54
TMEM259-205	ENST00000586704	GYG2	O15488	501 aa		18.4	■□□□□ 0.54
TMEM259-205	ENST00000586704	TBX10	O75333	385 aa		18.4	■□□□□ 0.54
TMEM259-205	ENST00000586704	LRIG2	O94898	1065 aa		18.4	■□□□□ 0.54
TMEM259-205	ENST00000586704	FCGRT	P55899	365 aa		18.4	■□□□□ 0.54
TMEM259-205	ENST00000586704	INTS6L	Q5JSJ4	861 aa	Known RBP	18.4	■□□□□ 0.54
TMEM259-205	ENST00000586704	LGSN	Q5TDP6	509 aa		18.4	■□□□□ 0.54
TMEM259-205	ENST00000586704	C16orf46	Q6P387	395 aa		18.4	■□□□□ 0.54
TMEM259-205	ENST00000586704	UPF3A	Q9H1J1	476 aa	Known RBP	18.4	■□□□□ 0.54
TMEM259-205	ENST00000586704	RPL9	P32969	192 aa	Known RBP	18.39	■□□□□ 0.53
TMEM259-205	ENST00000586704	FOXB2	Q5VYV0	432 aa		18.39	■□□□□ 0.53
TMEM259-205	ENST00000586704	ZCCHC23	Q6ZST2	131 aa		18.39	■□□□□ 0.53
TMEM259-205	ENST00000586704	CHSY1	Q86X52	802 aa		18.39	■□□□□ 0.53
TMEM259-205	ENST00000586704	NTAN1	Q96AB6	310 aa		18.39	■□□□□ 0.53
TMEM259-205	ENST00000586704	ATXN7L3B	Q96GX2	97 aa		18.39	■□□□□ 0.53
TMEM259-205	ENST00000586704	FCRL3	Q96P31	734 aa	Predicted RBP	18.39	■□□□□ 0.53
TMEM259-205	ENST00000586704	SLC9A7	Q96T83	725 aa		18.39	■□□□□ 0.53
TMEM259-205	ENST00000586704	TRIM55	Q9BYV6	548 aa		18.39	■□□□□ 0.53
TMEM259-205	ENST00000586704	FBXO6	Q9NRD1	293 aa	Predicted RBP	18.39	■□□□□ 0.53
TMEM259-205	ENST00000586704	TDRD15	B5MCY1	1934 aa	Known RBP	18.39	■□□□□ 0.53
TMEM259-205	ENST00000586704		A0A0U1RQF3	1178 aa		18.39	■□□□□ 0.53
TMEM259-205	ENST00000586704		C9IYK1	514 aa		18.39	■□□□□ 0.53
TMEM259-205	ENST00000586704	DNAJC6	O75061	913 aa		18.39	■□□□□ 0.53
TMEM259-205	ENST00000586704	GSTA2	P09210	222 aa		18.39	■□□□□ 0.53
TMEM259-205	ENST00000586704	FAM163B	P0C2L3	166 aa		18.39	■□□□□ 0.53
TMEM259-205	ENST00000586704	CD68	P34810	354 aa	Predicted RBP	18.39	■□□□□ 0.53
TMEM259-205	ENST00000586704	RINL	Q6ZS11	566 aa		18.39	■□□□□ 0.53
TMEM259-205	ENST00000586704	USP33	Q8TEY7	942 aa		18.39	■□□□□ 0.53
TMEM259-205	ENST00000586704	WDR60	Q8WVS4	1066 aa		18.39	■□□□□ 0.53
TMEM259-205	ENST00000586704	SKA1	Q96BD8	255 aa		18.39	■□□□□ 0.53
TMEM259-205	ENST00000586704	TRAPPC9	Q96Q05	1148 aa		18.39	■□□□□ 0.53
TMEM259-205	ENST00000586704	KCNK13	Q9HB14	408 aa		18.39	■□□□□ 0.53
TMEM259-205	ENST00000586704	CSNK1G1	Q9HCP0	422 aa		18.39	■□□□□ 0.53
TMEM259-205	ENST00000586704	STX18	Q9P2W9	335 aa	Known RBP	18.39	■□□□□ 0.53
TMEM259-205	ENST00000586704	ABT1	Q9ULW3	272 aa	Known RBP	18.39	■□□□□ 0.53
TMEM259-205	ENST00000586704	NOD1	Q9Y239	953 aa		18.39	■□□□□ 0.53
TMEM259-205	ENST00000586704	FAM237B	A0A1B0GVD1	139 aa		18.38	■□□□□ 0.53
TMEM259-205	ENST00000586704	CCDC78	A2IDD5	438 aa		18.38	■□□□□ 0.53
TMEM259-205	ENST00000586704	MSI1	O43347	362 aa	Known RBP	18.38	■□□□□ 0.53
TMEM259-205	ENST00000586704	CA12	O43570	354 aa		18.38	■□□□□ 0.53
TMEM259-205	ENST00000586704	PRKAR2A	P13861	404 aa	Known RBP	18.38	■□□□□ 0.53
TMEM259-205	ENST00000586704	ABCG1	P45844	678 aa		18.38	■□□□□ 0.53
TMEM259-205	ENST00000586704	SCAP	Q12770	1279 aa		18.38	■□□□□ 0.53

Retrieved 100 of 20,778 RNA–protein pairs in 38 ms