RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 PIK3R6Q5UE93 754 aa13.01□□□□□ -0.33
VMP1-202ENST00000585847 FAM131BQ86XD5 332 aa13.01□□□□□ -0.33
VMP1-202ENST00000585847 RFX6Q8HWS3 928 aa13.01□□□□□ -0.33
VMP1-202ENST00000585847 DENND1CQ8IV53 801 aa13.01□□□□□ -0.33
VMP1-202ENST00000585847 ADGRG2Q8IZP9 1017 aa13.01□□□□□ -0.33
VMP1-202ENST00000585847 CCDC185Q8N715 623 aa13.01□□□□□ -0.33
VMP1-202ENST00000585847 ATP6V0D2Q8N8Y2 350 aa13.01□□□□□ -0.33
VMP1-202ENST00000585847 TTC16Q8NEE8 873 aa13.01□□□□□ -0.33
VMP1-202ENST00000585847 P3H4Q92791 437 aa13.01□□□□□ -0.33
VMP1-202ENST00000585847 PRMT1Q99873 361 aaKnown RBP13.01□□□□□ -0.33
VMP1-202ENST00000585847 DDX50Q9BQ39 737 aaKnown RBP13.01□□□□□ -0.33
VMP1-202ENST00000585847 TRMT61BQ9BVS5 477 aaKnown RBP13.01□□□□□ -0.33
VMP1-202ENST00000585847 DHX35Q9H5Z1 703 aaKnown RBP13.01□□□□□ -0.33
VMP1-202ENST00000585847 ANKZF1Q9H8Y5 726 aa13.01□□□□□ -0.33
VMP1-202ENST00000585847 DUSP12Q9UNI6 340 aa13.01□□□□□ -0.33
VMP1-202ENST00000585847 SNX10Q9Y5X0 201 aa13.01□□□□□ -0.33
VMP1-202ENST00000585847 ATP8B1O43520 1251 aa13□□□□□ -0.33
VMP1-202ENST00000585847 ACSL4O60488 711 aa13□□□□□ -0.33
VMP1-202ENST00000585847 GFRA3O60609 400 aa13□□□□□ -0.33
VMP1-202ENST00000585847 CST8O60676 142 aa13□□□□□ -0.33
VMP1-202ENST00000585847 H2AFXP16104 143 aaPredicted RBP13□□□□□ -0.33
VMP1-202ENST00000585847 HOXC13P31276 330 aa13□□□□□ -0.33
VMP1-202ENST00000585847 SGSHP51688 502 aa13□□□□□ -0.33
VMP1-202ENST00000585847 TCF15Q12870 199 aa13□□□□□ -0.33
VMP1-202ENST00000585847 TDGQ13569 410 aa13□□□□□ -0.33
VMP1-202ENST00000585847 PTK6Q13882 451 aa13□□□□□ -0.33
VMP1-202ENST00000585847 ANKRD20A8PQ5CZ79 823 aa13□□□□□ -0.33
VMP1-202ENST00000585847 TXNRD3NBQ6F5E7 133 aa13□□□□□ -0.33
VMP1-202ENST00000585847 RHBDF2Q6PJF5 856 aa13□□□□□ -0.33
VMP1-202ENST00000585847 C14orf80Q86SX3 495 aa13□□□□□ -0.33
VMP1-202ENST00000585847 JAMLQ86YT9 394 aa13□□□□□ -0.33
VMP1-202ENST00000585847 CDKL3Q8IVW4 592 aaPredicted RBP13□□□□□ -0.33
VMP1-202ENST00000585847 KLHL7Q8IXQ5 586 aa13□□□□□ -0.33
VMP1-202ENST00000585847 ZNF683Q8IZ20 524 aa13□□□□□ -0.33
VMP1-202ENST00000585847 SLC35B2Q8TB61 432 aa13□□□□□ -0.33
VMP1-202ENST00000585847 RNF34Q969K3 372 aa13□□□□□ -0.33
VMP1-202ENST00000585847 BTN2A3PQ96KV6 586 aa13□□□□□ -0.33
VMP1-202ENST00000585847 CSPG4P5Q96PW8 444 aa13□□□□□ -0.33
VMP1-202ENST00000585847 ERP44Q9BS26 406 aa13□□□□□ -0.33
VMP1-202ENST00000585847 LRRC1Q9BTT6 524 aa13□□□□□ -0.33
VMP1-202ENST00000585847 TKTL2Q9H0I9 626 aa13□□□□□ -0.33
VMP1-202ENST00000585847 DDX47Q9H0S4 455 aaKnown RBP13□□□□□ -0.33
VMP1-202ENST00000585847 EBF3Q9H4W6 596 aa13□□□□□ -0.33
VMP1-202ENST00000585847 CATSPERBQ9H7T0 1116 aa13□□□□□ -0.33
VMP1-202ENST00000585847 ARFGAP3Q9NP61 516 aa13□□□□□ -0.33
VMP1-202ENST00000585847 GDF3Q9NR23 364 aa13□□□□□ -0.33
VMP1-202ENST00000585847 SLC2A4RGQ9NR83 387 aa13□□□□□ -0.33
VMP1-202ENST00000585847 FAM86C1Q9NVL1 165 aa13□□□□□ -0.33
VMP1-202ENST00000585847 DUS2Q9NX74 493 aaKnown RBP13□□□□□ -0.33
VMP1-202ENST00000585847 BHMG1C9JSJ3 638 aaPredicted RBP12.99□□□□□ -0.33
VMP1-202ENST00000585847 TRDMT1O14717 391 aaKnown RBP12.99□□□□□ -0.33
VMP1-202ENST00000585847 PPP1R12AO14974 1030 aaPredicted RBP12.99□□□□□ -0.33
VMP1-202ENST00000585847 RAD51CO43502 376 aa12.99□□□□□ -0.33
VMP1-202ENST00000585847 PAGE1O75459 146 aa12.99□□□□□ -0.33
VMP1-202ENST00000585847 STK10O94804 968 aaKnown RBP12.99□□□□□ -0.33
VMP1-202ENST00000585847 MOCS2O96007 188 aaPredicted RBP12.99□□□□□ -0.33
VMP1-202ENST00000585847 CYP17A1P05093 508 aa12.99□□□□□ -0.33
VMP1-202ENST00000585847 RHOXF2BP0C7M4 288 aa12.99□□□□□ -0.33
VMP1-202ENST00000585847 SRFP11831 508 aa12.99□□□□□ -0.33
VMP1-202ENST00000585847 AVPR2P30518 371 aa12.99□□□□□ -0.33
VMP1-202ENST00000585847 GGCXP38435 758 aa12.99□□□□□ -0.33
VMP1-202ENST00000585847 HARS2P49590 506 aaKnown RBP12.99□□□□□ -0.33
VMP1-202ENST00000585847 TPI1P60174 286 aa12.99□□□□□ -0.33
VMP1-202ENST00000585847 CALCOCO2Q13137 446 aa12.99□□□□□ -0.33
VMP1-202ENST00000585847 PDK1Q15118 436 aa12.99□□□□□ -0.33
VMP1-202ENST00000585847 NOMO1Q15155 1222 aa12.99□□□□□ -0.33
VMP1-202ENST00000585847 DHCR24Q15392 516 aa12.99□□□□□ -0.33
VMP1-202ENST00000585847 PPP1R7Q15435 360 aa12.99□□□□□ -0.33
VMP1-202ENST00000585847 MS4A13Q5J8X5 152 aa12.99□□□□□ -0.33
VMP1-202ENST00000585847 TMCO3Q6UWJ1 677 aa12.99□□□□□ -0.33
VMP1-202ENST00000585847 RFX8Q6ZV50 586 aa12.99□□□□□ -0.33
VMP1-202ENST00000585847 TMEM25Q86YD3 366 aa12.99□□□□□ -0.33
VMP1-202ENST00000585847 CPXM2Q8N436 756 aa12.99□□□□□ -0.33
VMP1-202ENST00000585847 PRICKLE1Q96MT3 831 aaPredicted RBP12.99□□□□□ -0.33
VMP1-202ENST00000585847 PPP1R2P1Q96PQ5 205 aa12.99□□□□□ -0.33
VMP1-202ENST00000585847 RHOXF2Q9BQY4 288 aa12.99□□□□□ -0.33
VMP1-202ENST00000585847 PARD6BQ9BYG5 372 aa12.99□□□□□ -0.33
VMP1-202ENST00000585847 PHACTR1Q9C0D0 580 aa12.99□□□□□ -0.33
VMP1-202ENST00000585847 PCDH9Q9HC56 1237 aa12.99□□□□□ -0.33
VMP1-202ENST00000585847 TRPV5Q9NQA5 729 aa12.99□□□□□ -0.33
VMP1-202ENST00000585847 GTSE1Q9NYZ3 720 aa12.99□□□□□ -0.33
VMP1-202ENST00000585847 TBC1D14Q9P2M4 693 aa12.99□□□□□ -0.33
VMP1-202ENST00000585847 PPARGC1AQ9UBK2 798 aaKnown RBP12.99□□□□□ -0.33
VMP1-202ENST00000585847 AMACRQ9UHK6 382 aa12.99□□□□□ -0.33
VMP1-202ENST00000585847 LSM7Q9UK45 103 aaKnown RBP12.99□□□□□ -0.33
VMP1-202ENST00000585847 SORCS3Q9UPU3 1222 aa12.99□□□□□ -0.33
VMP1-202ENST00000585847 NEU3Q9UQ49 428 aa12.99□□□□□ -0.33
VMP1-202ENST00000585847 HS3ST4Q9Y661 456 aa12.99□□□□□ -0.33
VMP1-202ENST00000585847 KIAA1549LQ6ZVL6 1849 aa12.99□□□□□ -0.33
VMP1-202ENST00000585847 ZDBF2Q9HCK1 2354 aa12.98□□□□□ -0.33
VMP1-202ENST00000585847 FAM72CH0Y354 149 aa12.98□□□□□ -0.33
VMP1-202ENST00000585847 EEF2KO00418 725 aaKnown RBP12.98□□□□□ -0.33
VMP1-202ENST00000585847 DAPK3O43293 454 aa12.98□□□□□ -0.33
VMP1-202ENST00000585847 ACTN2P35609 894 aa12.98□□□□□ -0.33
VMP1-202ENST00000585847 IFNAR2P48551 515 aa12.98□□□□□ -0.33
VMP1-202ENST00000585847 SLC11A2P49281 568 aa12.98□□□□□ -0.33
VMP1-202ENST00000585847 IRAK1P51617 712 aa12.98□□□□□ -0.33
VMP1-202ENST00000585847 MLLT6P55198 1093 aaPredicted RBP12.98□□□□□ -0.33
VMP1-202ENST00000585847 RUNX3Q13761 415 aa12.98□□□□□ -0.33
VMP1-202ENST00000585847 DPYSQ14117 519 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms