RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 STK40Q8N2I9 435 aa18.56■□□□□ 0.56
SRSF1-208ENST00000584773 MINDY1Q8N5J2 469 aa18.56■□□□□ 0.56
SRSF1-208ENST00000584773 CADM4Q8NFZ8 388 aa18.56■□□□□ 0.56
SRSF1-208ENST00000584773 DNASE2BQ8WZ79 361 aa18.56■□□□□ 0.56
SRSF1-208ENST00000584773 ALG14Q96F25 216 aa18.56■□□□□ 0.56
SRSF1-208ENST00000584773 C11orf70Q9BRQ4 267 aa18.56■□□□□ 0.56
SRSF1-208ENST00000584773 WDCPQ9H6R7 721 aa18.56■□□□□ 0.56
SRSF1-208ENST00000584773 ITIH6Q6UXX5 1313 aa18.56■□□□□ 0.56
SRSF1-208ENST00000584773 ARHGAP33O14559 1287 aa18.55■□□□□ 0.56
SRSF1-208ENST00000584773 SRPRAP08240 638 aaKnown RBP18.55■□□□□ 0.56
SRSF1-208ENST00000584773 C7P10643 843 aa18.55■□□□□ 0.56
SRSF1-208ENST00000584773 CDK11BP21127 795 aaKnown RBP18.55■□□□□ 0.56
SRSF1-208ENST00000584773 SCNN1AP37088 669 aa18.55■□□□□ 0.56
SRSF1-208ENST00000584773 STAT1P42224 750 aa18.55■□□□□ 0.56
SRSF1-208ENST00000584773 ATXN3P54252 364 aaPredicted RBP18.55■□□□□ 0.56
SRSF1-208ENST00000584773 SLC25A52Q3SY17 297 aa18.55■□□□□ 0.56
SRSF1-208ENST00000584773 ARTNQ5T4W7 220 aa18.55■□□□□ 0.56
SRSF1-208ENST00000584773 TTC39BQ5VTQ0 682 aaPredicted RBP18.55■□□□□ 0.56
SRSF1-208ENST00000584773 RNF219Q5W0B1 726 aaPredicted RBP18.55■□□□□ 0.56
SRSF1-208ENST00000584773 NEK11Q8NG66 645 aa18.55■□□□□ 0.56
SRSF1-208ENST00000584773 JOSD2Q8TAC2 188 aa18.55■□□□□ 0.56
SRSF1-208ENST00000584773 PTPRN2Q92932 1015 aa18.55■□□□□ 0.56
SRSF1-208ENST00000584773 PGAP3Q96FM1 320 aaPredicted RBP18.55■□□□□ 0.56
SRSF1-208ENST00000584773 CNTNAP3BQ96NU0 1288 aa18.55■□□□□ 0.56
SRSF1-208ENST00000584773 FAM129BQ96TA1 746 aa18.55■□□□□ 0.56
SRSF1-208ENST00000584773 CNTNAP3Q9BZ76 1288 aa18.55■□□□□ 0.56
SRSF1-208ENST00000584773 PABPC3Q9H361 631 aaKnown RBP18.55■□□□□ 0.56
SRSF1-208ENST00000584773 FBRSQ9HAH7 460 aa18.55■□□□□ 0.56
SRSF1-208ENST00000584773 RRN3Q9NYV6 651 aa18.55■□□□□ 0.56
SRSF1-208ENST00000584773 A0A1W2PP55 124 aa18.54■□□□□ 0.56
SRSF1-208ENST00000584773 TEX33O43247 280 aa18.54■□□□□ 0.56
SRSF1-208ENST00000584773 SEMA4FO95754 770 aa18.54■□□□□ 0.56
SRSF1-208ENST00000584773 PSMD8P48556 350 aa18.54■□□□□ 0.56
SRSF1-208ENST00000584773 METAP1P53582 386 aa18.54■□□□□ 0.56
SRSF1-208ENST00000584773 ATP11AP98196 1134 aa18.54■□□□□ 0.56
SRSF1-208ENST00000584773 BNC1Q01954 994 aa18.54■□□□□ 0.56
SRSF1-208ENST00000584773 GRIK2Q13002 908 aa18.54■□□□□ 0.56
SRSF1-208ENST00000584773 C15orf59Q2T9L4 293 aaPredicted RBP18.54■□□□□ 0.56
SRSF1-208ENST00000584773 BRMS1LQ5PSV4 323 aa18.54■□□□□ 0.56
SRSF1-208ENST00000584773 CAVIN1Q6NZI2 390 aaKnown RBP18.54■□□□□ 0.56
SRSF1-208ENST00000584773 LAYNQ6UX15 382 aa18.54■□□□□ 0.56
SRSF1-208ENST00000584773 FAM131BQ86XD5 332 aa18.54■□□□□ 0.56
SRSF1-208ENST00000584773 ZNF677Q86XU0 584 aa18.54■□□□□ 0.56
SRSF1-208ENST00000584773 ANKRD20A12PQ8NF67 263 aa18.54■□□□□ 0.56
SRSF1-208ENST00000584773 GANCQ8TET4 914 aa18.54■□□□□ 0.56
SRSF1-208ENST00000584773 BTBD1Q9H0C5 482 aa18.54■□□□□ 0.56
SRSF1-208ENST00000584773 FBXL12Q9NXK8 326 aa18.54■□□□□ 0.56
SRSF1-208ENST00000584773 MPP6Q9NZW5 540 aa18.54■□□□□ 0.56
SRSF1-208ENST00000584773 OR51B4Q9Y5P0 310 aa18.54■□□□□ 0.56
SRSF1-208ENST00000584773 TPRP12270 2363 aaKnown RBP18.54■□□□□ 0.56
SRSF1-208ENST00000584773 PLXNA2O75051 1894 aa18.54■□□□□ 0.56
SRSF1-208ENST00000584773 DOCK4Q8N1I0 1966 aa18.54■□□□□ 0.56
SRSF1-208ENST00000584773 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.53■□□□□ 0.56
SRSF1-208ENST00000584773 EDDM13A0A1B0GTR0 161 aa18.53■□□□□ 0.56
SRSF1-208ENST00000584773 A0A1B0GTW7 788 aa18.53■□□□□ 0.56
SRSF1-208ENST00000584773 FAM47DPA6NHR8 397 aa18.53■□□□□ 0.56
SRSF1-208ENST00000584773 FSBPO95073 299 aa18.53■□□□□ 0.56
SRSF1-208ENST00000584773 GNSP15586 552 aa18.53■□□□□ 0.56
SRSF1-208ENST00000584773 MMP8P22894 467 aa18.53■□□□□ 0.56
SRSF1-208ENST00000584773 PLK1P53350 603 aa18.53■□□□□ 0.56
SRSF1-208ENST00000584773 ZBTB16Q05516 673 aa18.53■□□□□ 0.56
SRSF1-208ENST00000584773 ZNF252P-AS1Q0IIN9 211 aa18.53■□□□□ 0.56
SRSF1-208ENST00000584773 PTP4A2Q12974 167 aa18.53■□□□□ 0.56
SRSF1-208ENST00000584773 ZNF177Q13360 481 aaPredicted RBP18.53■□□□□ 0.56
SRSF1-208ENST00000584773 ARID5BQ14865 1188 aa18.53■□□□□ 0.56
SRSF1-208ENST00000584773 CST6Q15828 149 aa18.53■□□□□ 0.56
SRSF1-208ENST00000584773 CDO1Q16878 200 aa18.53■□□□□ 0.56
SRSF1-208ENST00000584773 TTC31Q49AM3 519 aaPredicted RBP18.53■□□□□ 0.56
SRSF1-208ENST00000584773 C5orf22Q49AR2 442 aa18.53■□□□□ 0.56
SRSF1-208ENST00000584773 SND1Q7KZF4 910 aaKnown RBP eCLIP18.53■□□□□ 0.56
SRSF1-208ENST00000584773 BNIPLQ7Z465 357 aa18.53■□□□□ 0.56
SRSF1-208ENST00000584773 RABEPKQ7Z6M1 372 aa18.53■□□□□ 0.56
SRSF1-208ENST00000584773 TFAP2DQ7Z6R9 452 aa18.53■□□□□ 0.56
SRSF1-208ENST00000584773 KDM1BQ8NB78 822 aa18.53■□□□□ 0.56
SRSF1-208ENST00000584773 MSANTD4Q8NCY6 345 aa18.53■□□□□ 0.56
SRSF1-208ENST00000584773 C1orf216Q8TAB5 229 aa18.53■□□□□ 0.56
SRSF1-208ENST00000584773 FRS2Q8WU20 508 aa18.53■□□□□ 0.56
SRSF1-208ENST00000584773 ERGIC2Q96RQ1 377 aa18.53■□□□□ 0.56
SRSF1-208ENST00000584773 FEM1AQ9BSK4 669 aa18.53■□□□□ 0.56
SRSF1-208ENST00000584773 IL21RQ9HBE5 538 aa18.53■□□□□ 0.56
SRSF1-208ENST00000584773 SUSD2Q9UGT4 822 aa18.53■□□□□ 0.56
SRSF1-208ENST00000584773 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.53■□□□□ 0.56
SRSF1-208ENST00000584773 PCNX2A6NKB5 2137 aa18.53■□□□□ 0.56
SRSF1-208ENST00000584773 KNL1Q8NG31 2342 aa18.53■□□□□ 0.56
SRSF1-208ENST00000584773 TMEM131Q92545 1883 aa18.52■□□□□ 0.56
SRSF1-208ENST00000584773 LRRC10BA6NIK2 292 aa18.52■□□□□ 0.56
SRSF1-208ENST00000584773 PLK4O00444 970 aa18.52■□□□□ 0.56
SRSF1-208ENST00000584773 SNAP91O60641 907 aa18.52■□□□□ 0.56
SRSF1-208ENST00000584773 UNGP13051 313 aaPredicted RBP18.52■□□□□ 0.56
SRSF1-208ENST00000584773 PMLP29590 882 aa18.52■□□□□ 0.56
SRSF1-208ENST00000584773 RDXP35241 583 aaKnown RBP18.52■□□□□ 0.56
SRSF1-208ENST00000584773 CDH4P55283 916 aa18.52■□□□□ 0.56
SRSF1-208ENST00000584773 SEMA3BQ13214 749 aa18.52■□□□□ 0.56
SRSF1-208ENST00000584773 SLC12A1Q13621 1099 aa18.52■□□□□ 0.56
SRSF1-208ENST00000584773 AADATQ8N5Z0 425 aa18.52■□□□□ 0.56
SRSF1-208ENST00000584773 RXFP2Q8WXD0 754 aa18.52■□□□□ 0.56
SRSF1-208ENST00000584773 BIRC7Q96CA5 298 aa18.52■□□□□ 0.56
SRSF1-208ENST00000584773 PSMB7Q99436 277 aa18.52■□□□□ 0.56
SRSF1-208ENST00000584773 MAGEB5Q9BZ81 275 aa18.52■□□□□ 0.56
SRSF1-208ENST00000584773 NEUROG2Q9H2A3 272 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms