RNA–Protein interactions for RNA: ENST00000584754.1

PPP4R1-229, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 5

Gene PPP4R1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-229	ENST00000584754	SEC62	Q99442	399 aa	Known RBP	4.07	□□□□□ -1.76
PPP4R1-229	ENST00000584754	THAP7	Q9BT49	309 aa	Predicted RBP	4.07	□□□□□ -1.76
PPP4R1-229	ENST00000584754	VPS16	Q9H269	839 aa		4.07	□□□□□ -1.76
PPP4R1-229	ENST00000584754	PDGFC	Q9NRA1	345 aa		4.07	□□□□□ -1.76
PPP4R1-229	ENST00000584754	CHD2	O14647	1828 aa	Known RBP	4.07	□□□□□ -1.76
PPP4R1-229	ENST00000584754	RGS12	O14924	1447 aa		4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	FGD6	Q6ZV73	1430 aa		4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	TMEM2	Q9UHN6	1383 aa		4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	KAT6A	Q92794	2004 aa		4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	ZNF804B	A4D1E1	1349 aa		4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	TBC1D3D	A0A087WVF3	549 aa		4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	TBC1D3I	A0A087WXS9	549 aa		4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	TBC1D3E	A0A087X179	549 aa		4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	TBC1D3K	A0A087X1G2	549 aa		4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	TBC1D3B	A6NDS4	549 aa		4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	FAM90A18P	A6NE21	464 aa		4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	TBC1D3F	A6NER0	549 aa	Predicted RBP	4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	FAM90A16P	A6NEW6	464 aa		4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	FAM90A9P	A6NNJ1	464 aa		4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	FAM90A5P	A8MXJ8	464 aa		4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	TBC1D3L	B9A6J9	549 aa		4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754		E7EVH7	732 aa		4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	PPP6C	O00743	305 aa		4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	NKX2-8	O15522	239 aa		4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	PPP6R2	O75170	966 aa		4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	RPP40	O75818	363 aa	Known RBP	4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	ALDOA	P04075	364 aa	Known RBP	4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	IFIT1	P09914	478 aa	Known RBP	4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	FAM90A15P	P0C7V4	464 aa		4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	FAM90A14P	P0C7W9	464 aa		4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	TBC1D3H	P0C7X1	549 aa		4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	EPHB2	P29323	1055 aa		4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	KRT9	P35527	623 aa		4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	IGHMBP2	P38935	993 aa	Known RBP	4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	ARL1	P40616	181 aa	Predicted RBP	4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	ARHGAP25	P42331	645 aa		4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	RBM5	P52756	815 aa	Known RBP eCLIP	4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	COPB1	P53618	953 aa	Known RBP	4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	TBL3	Q12788	808 aa	Known RBP	4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	MTAP	Q13126	283 aa		4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	BFSP2	Q13515	415 aa		4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	DNASE1L3	Q13609	305 aa		4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	GPR162	Q16538	588 aa		4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	FAM110C	Q1W6H9	321 aa		4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	MAP3K21	Q5TCX8	1036 aa		4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	MEX3C	Q5U5Q3	659 aa	Known RBP	4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	TBC1D3G	Q6DHY5	549 aa		4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	TBC1D3C	Q6IPX1	549 aa		4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	MSANTD2	Q6P1R3	559 aa		4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	PIK3AP1	Q6ZUJ8	805 aa		4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	RASGRP2	Q7LDG7	609 aa		4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	HERC6	Q8IVU3	1022 aa		4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	C16orf71	Q8IYS4	520 aa	Predicted RBP	4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	TBC1D3	Q8IZP1	549 aa	Predicted RBP	4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	METTL25	Q8N6Q8	603 aa		4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	ANKRD44	Q8N8A2	993 aa		4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	PPHLN1	Q8NEY8	458 aa	Known RBP	4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	SLC2A12	Q8TD20	617 aa		4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	ADAMTS18	Q8TE60	1221 aa		4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	HERVK_113	Q902F9	699 aa		4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	SNX18	Q96RF0	628 aa		4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	MMS19	Q96T76	1030 aa		4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	GAR1	Q9NY12	217 aa	Known RBP	4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	ASIC5	Q9NY37	505 aa		4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	FEM1B	Q9UK73	627 aa		4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	SCAF8	Q9UPN6	1271 aa	Known RBP	4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	KDM5A	P29375	1690 aa	Known RBP	4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	AHDC1	Q5TGY3	1603 aa	Predicted RBP	4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	EIF2AK4	Q9P2K8	1649 aa	Known RBP	4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	ARHGEF5	Q12774	1597 aa		4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	DIP2A	Q14689	1571 aa		4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	SETBP1	Q9Y6X0	1596 aa		4.06	□□□□□ -1.76
PPP4R1-229	ENST00000584754	NKTR	P30414	1462 aa	Known RBP	4.05	□□□□□ -1.76
PPP4R1-229	ENST00000584754	MSH6	P52701	1360 aa		4.05	□□□□□ -1.76
PPP4R1-229	ENST00000584754	MTUS2	Q5JR59	1369 aa		4.05	□□□□□ -1.76
PPP4R1-229	ENST00000584754	MYO5B	Q9ULV0	1848 aa		4.05	□□□□□ -1.76
PPP4R1-229	ENST00000584754	SPATA31A1	Q5TZJ5	1347 aa		4.05	□□□□□ -1.76
PPP4R1-229	ENST00000584754	ITIH6	Q6UXX5	1313 aa		4.05	□□□□□ -1.76
PPP4R1-229	ENST00000584754	TCRBV5S1A1T	A0A578	114 aa		4.05	□□□□□ -1.76
PPP4R1-229	ENST00000584754	BTBD19	C9JJ37	291 aa		4.05	□□□□□ -1.76
PPP4R1-229	ENST00000584754	CCNT1	O60563	726 aa	Known RBP	4.05	□□□□□ -1.76
PPP4R1-229	ENST00000584754	CER1	O95813	267 aa		4.05	□□□□□ -1.76
PPP4R1-229	ENST00000584754	CYP3A4	P08684	503 aa		4.05	□□□□□ -1.76
PPP4R1-229	ENST00000584754	CNP	P09543	421 aa	Known RBP	4.05	□□□□□ -1.76
PPP4R1-229	ENST00000584754	TMIGD3	P0DMS9	266 aa	Predicted RBP	4.05	□□□□□ -1.76
PPP4R1-229	ENST00000584754	SFPQ	P23246	707 aa	Known RBP eCLIP	4.05	□□□□□ -1.76
PPP4R1-229	ENST00000584754	KLRK1	P26718	216 aa		4.05	□□□□□ -1.76
PPP4R1-229	ENST00000584754	ELF1	P32519	619 aa		4.05	□□□□□ -1.76
PPP4R1-229	ENST00000584754	PBX1	P40424	430 aa		4.05	□□□□□ -1.76
PPP4R1-229	ENST00000584754	PNLIPRP1	P54315	467 aa		4.05	□□□□□ -1.76
PPP4R1-229	ENST00000584754	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	4.05	□□□□□ -1.76
PPP4R1-229	ENST00000584754	MAPK7	Q13164	816 aa		4.05	□□□□□ -1.76
PPP4R1-229	ENST00000584754	KLF9	Q13886	244 aa	Predicted RBP	4.05	□□□□□ -1.76
PPP4R1-229	ENST00000584754	AAK1	Q2M2I8	961 aa		4.05	□□□□□ -1.76
PPP4R1-229	ENST00000584754	BTBD16	Q32M84	506 aa		4.05	□□□□□ -1.76
PPP4R1-229	ENST00000584754	EPHA10	Q5JZY3	1008 aa		4.05	□□□□□ -1.76
PPP4R1-229	ENST00000584754	SLC18B1	Q6NT16	456 aa		4.05	□□□□□ -1.76
PPP4R1-229	ENST00000584754	ACSM6	Q6P461	480 aa		4.05	□□□□□ -1.76
PPP4R1-229	ENST00000584754	VSTM1	Q6UX27	236 aa		4.05	□□□□□ -1.76
PPP4R1-229	ENST00000584754	BCDIN3D	Q7Z5W3	292 aa	Known RBP	4.05	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms