RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.97□□□□□ -0.49
CDRT1-207ENST00000583965 CEP104O60308 925 aa11.97□□□□□ -0.49
CDRT1-207ENST00000583965 CST8O60676 142 aa11.97□□□□□ -0.49
CDRT1-207ENST00000583965 KRT10P13645 584 aa11.97□□□□□ -0.49
CDRT1-207ENST00000583965 TGM2P21980 687 aa11.97□□□□□ -0.49
CDRT1-207ENST00000583965 CXCR5P32302 372 aa11.97□□□□□ -0.49
CDRT1-207ENST00000583965 GJA4P35212 333 aa11.97□□□□□ -0.49
CDRT1-207ENST00000583965 NR2C2P49116 596 aa11.97□□□□□ -0.49
CDRT1-207ENST00000583965 GAB4Q2WGN9 574 aa11.97□□□□□ -0.49
CDRT1-207ENST00000583965 TJAP1Q5JTD0 557 aa11.97□□□□□ -0.49
CDRT1-207ENST00000583965 KAZNQ674X7 775 aa11.97□□□□□ -0.49
CDRT1-207ENST00000583965 NCBP2-AS2Q69YL0 99 aa11.97□□□□□ -0.49
CDRT1-207ENST00000583965 BZW1Q7L1Q6 419 aaKnown RBP11.97□□□□□ -0.49
CDRT1-207ENST00000583965 ANKS1BQ7Z6G8 1248 aa11.97□□□□□ -0.49
CDRT1-207ENST00000583965 RALGPS2Q86X27 583 aaPredicted RBP11.97□□□□□ -0.49
CDRT1-207ENST00000583965 LRRC49Q8IUZ0 686 aa11.97□□□□□ -0.49
CDRT1-207ENST00000583965 SUGP1Q8IWZ8 645 aaKnown RBP11.97□□□□□ -0.49
CDRT1-207ENST00000583965 RASGEF1CQ8N431 466 aa11.97□□□□□ -0.49
CDRT1-207ENST00000583965 P2RY11Q96G91 374 aa11.97□□□□□ -0.49
CDRT1-207ENST00000583965 MAGEH1Q9H213 219 aa11.97□□□□□ -0.49
CDRT1-207ENST00000583965 KIAA1522Q9P206 1035 aaPredicted RBP11.97□□□□□ -0.49
CDRT1-207ENST00000583965 RNF14Q9UBS8 474 aa11.97□□□□□ -0.49
CDRT1-207ENST00000583965 SLC27A6Q9Y2P4 619 aa11.97□□□□□ -0.49
CDRT1-207ENST00000583965 APOC4-APOC2K7ER74 178 aa11.96□□□□□ -0.49
CDRT1-207ENST00000583965 NCAM2O15394 837 aa11.96□□□□□ -0.49
CDRT1-207ENST00000583965 RAMP2O60895 175 aa11.96□□□□□ -0.49
CDRT1-207ENST00000583965 APOC2P02655 101 aa11.96□□□□□ -0.49
CDRT1-207ENST00000583965 RHOCP08134 193 aa11.96□□□□□ -0.49
CDRT1-207ENST00000583965 DGKGP49619 791 aa11.96□□□□□ -0.49
CDRT1-207ENST00000583965 PLK1P53350 603 aa11.96□□□□□ -0.49
CDRT1-207ENST00000583965 KLF1Q13351 362 aaPredicted RBP11.96□□□□□ -0.49
CDRT1-207ENST00000583965 DMC1Q14565 340 aa11.96□□□□□ -0.49
CDRT1-207ENST00000583965 POLD3Q15054 466 aaPredicted RBP11.96□□□□□ -0.49
CDRT1-207ENST00000583965 PARP15Q460N3 678 aa11.96□□□□□ -0.49
CDRT1-207ENST00000583965 AFMIDQ63HM1 303 aa11.96□□□□□ -0.49
CDRT1-207ENST00000583965 CXorf57Q6NSI4 855 aaKnown RBP11.96□□□□□ -0.49
CDRT1-207ENST00000583965 AADACL2Q6P093 401 aa11.96□□□□□ -0.49
CDRT1-207ENST00000583965 NUDT18Q6ZVK8 323 aa11.96□□□□□ -0.49
CDRT1-207ENST00000583965 KIAA0907Q7Z7F0 614 aaPredicted RBP11.96□□□□□ -0.49
CDRT1-207ENST00000583965 SLC13A5Q86YT5 568 aaPredicted RBP11.96□□□□□ -0.49
CDRT1-207ENST00000583965 RNF135Q8IUD6 432 aa11.96□□□□□ -0.49
CDRT1-207ENST00000583965 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.96□□□□□ -0.49
CDRT1-207ENST00000583965 UBALD2Q8IYN6 164 aa11.96□□□□□ -0.49
CDRT1-207ENST00000583965 GJD3Q8N144 294 aa11.96□□□□□ -0.49
CDRT1-207ENST00000583965 PLD5Q8N7P1 536 aa11.96□□□□□ -0.49
CDRT1-207ENST00000583965 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.96□□□□□ -0.49
CDRT1-207ENST00000583965 TTC13Q8NBP0 860 aa11.96□□□□□ -0.49
CDRT1-207ENST00000583965 ACTRT1Q8TDG2 376 aa11.96□□□□□ -0.49
CDRT1-207ENST00000583965 WFIKKN2Q8TEU8 576 aa11.96□□□□□ -0.49
CDRT1-207ENST00000583965 HEMGNQ9BXL5 484 aa11.96□□□□□ -0.49
CDRT1-207ENST00000583965 KLC2Q9H0B6 622 aa11.96□□□□□ -0.49
CDRT1-207ENST00000583965 LRRC19Q9H756 370 aa11.96□□□□□ -0.49
CDRT1-207ENST00000583965 NDFIP2Q9NV92 336 aa11.96□□□□□ -0.49
CDRT1-207ENST00000583965 ETNK2Q9NVF9 386 aa11.96□□□□□ -0.49
CDRT1-207ENST00000583965 DNAJC17Q9NVM6 304 aaKnown RBP11.96□□□□□ -0.49
CDRT1-207ENST00000583965 DEC1Q9P2X7 70 aa11.96□□□□□ -0.49
CDRT1-207ENST00000583965 MRFAP1Q9Y605 127 aa11.96□□□□□ -0.49
CDRT1-207ENST00000583965 BDP1A6H8Y1 2624 aa11.95□□□□□ -0.5
CDRT1-207ENST00000583965 CXorf51AA0A1B0GTR3 108 aa11.95□□□□□ -0.5
CDRT1-207ENST00000583965 ARHGAP42A6NI28 874 aa11.95□□□□□ -0.5
CDRT1-207ENST00000583965 SPECC1L-ADORA2AF8WAN1 911 aa11.95□□□□□ -0.5
CDRT1-207ENST00000583965 PGRMC1O00264 195 aaKnown RBP11.95□□□□□ -0.5
CDRT1-207ENST00000583965 RIOK3O14730 519 aaKnown RBP11.95□□□□□ -0.5
CDRT1-207ENST00000583965 NARSO43776 548 aaKnown RBP11.95□□□□□ -0.5
CDRT1-207ENST00000583965 MFSD11O43934 449 aa11.95□□□□□ -0.5
CDRT1-207ENST00000583965 TULP3O75386 442 aa11.95□□□□□ -0.5
CDRT1-207ENST00000583965 FGGP02679 453 aa11.95□□□□□ -0.5
CDRT1-207ENST00000583965 CISD3P0C7P0 127 aa11.95□□□□□ -0.5
CDRT1-207ENST00000583965 PABPC1P11940 636 aaKnown RBP11.95□□□□□ -0.5
CDRT1-207ENST00000583965 MX2P20592 715 aa11.95□□□□□ -0.5
CDRT1-207ENST00000583965 CTHP32929 405 aa11.95□□□□□ -0.5
CDRT1-207ENST00000583965 OPRD1P41143 372 aa11.95□□□□□ -0.5
CDRT1-207ENST00000583965 DYNLT1P63172 113 aa11.95□□□□□ -0.5
CDRT1-207ENST00000583965 GNA12Q03113 381 aa11.95□□□□□ -0.5
CDRT1-207ENST00000583965 LMAN2Q12907 356 aa11.95□□□□□ -0.5
CDRT1-207ENST00000583965 CCDC181Q5TID7 509 aa11.95□□□□□ -0.5
CDRT1-207ENST00000583965 RNF219Q5W0B1 726 aaPredicted RBP11.95□□□□□ -0.5
CDRT1-207ENST00000583965 GRAMD4Q6IC98 578 aa11.95□□□□□ -0.5
CDRT1-207ENST00000583965 ARHGAP12Q8IWW6 846 aa11.95□□□□□ -0.5
CDRT1-207ENST00000583965 AHI1Q8N157 1196 aa11.95□□□□□ -0.5
CDRT1-207ENST00000583965 NPWQ8N729 165 aa11.95□□□□□ -0.5
CDRT1-207ENST00000583965 NAT16Q8N8M0 369 aa11.95□□□□□ -0.5
CDRT1-207ENST00000583965 MYRIPQ8NFW9 859 aa11.95□□□□□ -0.5
CDRT1-207ENST00000583965 WFDC5Q8TCV5 224 aa11.95□□□□□ -0.5
CDRT1-207ENST00000583965 COG1Q8WTW3 980 aa11.95□□□□□ -0.5
CDRT1-207ENST00000583965 P3H4Q92791 437 aa11.95□□□□□ -0.5
CDRT1-207ENST00000583965 LMLNQ96KR4 655 aa11.95□□□□□ -0.5
CDRT1-207ENST00000583965 PNKPQ96T60 521 aa11.95□□□□□ -0.5
CDRT1-207ENST00000583965 FRMD8P1Q9BZ68 369 aaPredicted RBP11.95□□□□□ -0.5
CDRT1-207ENST00000583965 BRD8Q9H0E9 1235 aa11.95□□□□□ -0.5
CDRT1-207ENST00000583965 MUC3BQ9H195 1237 aa11.95□□□□□ -0.5
CDRT1-207ENST00000583965 NOL6Q9H6R4 1146 aaKnown RBP11.95□□□□□ -0.5
CDRT1-207ENST00000583965 ABCB8Q9NUT2 735 aa11.95□□□□□ -0.5
CDRT1-207ENST00000583965 CDC23Q9UJX2 597 aa11.95□□□□□ -0.5
CDRT1-207ENST00000583965 GGA2Q9UJY4 613 aa11.95□□□□□ -0.5
CDRT1-207ENST00000583965 CLEC4EQ9ULY5 219 aa11.95□□□□□ -0.5
CDRT1-207ENST00000583965 HPCAL4Q9UM19 191 aa11.95□□□□□ -0.5
CDRT1-207ENST00000583965 PIAS3Q9Y6X2 628 aa11.95□□□□□ -0.5
CDRT1-207ENST00000583965 MUC22E2RYF6 1773 aaPredicted RBP11.95□□□□□ -0.5
CDRT1-207ENST00000583965 CKAP5Q14008 2032 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms