RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 CAPN11Q9UMQ6 739 aa21.21■□□□□ 0.99
SRSF1-206ENST00000583741 LUC7L2Q9Y383 392 aaKnown RBP21.21■□□□□ 0.99
SRSF1-206ENST00000583741 A0A087WV48 116 aa21.2■□□□□ 0.98
SRSF1-206ENST00000583741 O00370 1275 aa21.2■□□□□ 0.98
SRSF1-206ENST00000583741 PAPSS1O43252 624 aaPredicted RBP21.2■□□□□ 0.98
SRSF1-206ENST00000583741 MFAP3LO75121 409 aa21.2■□□□□ 0.98
SRSF1-206ENST00000583741 LCP1P13796 627 aa21.2■□□□□ 0.98
SRSF1-206ENST00000583741 ADKP55263 362 aaKnown RBP21.2■□□□□ 0.98
SRSF1-206ENST00000583741 POLR2FP61218 127 aaKnown RBP21.2■□□□□ 0.98
SRSF1-206ENST00000583741 PKDCCQ504Y2 493 aa21.2■□□□□ 0.98
SRSF1-206ENST00000583741 PRAMEF14Q5SWL7 426 aa21.2■□□□□ 0.98
SRSF1-206ENST00000583741 MPP7Q5T2T1 576 aa21.2■□□□□ 0.98
SRSF1-206ENST00000583741 KIAA0895LQ68EN5 471 aa21.2■□□□□ 0.98
SRSF1-206ENST00000583741 MSANTD2Q6P1R3 559 aa21.2■□□□□ 0.98
SRSF1-206ENST00000583741 PDCD7Q8N8D1 485 aaKnown RBP21.2■□□□□ 0.98
SRSF1-206ENST00000583741 KCTD13Q8WZ19 329 aa21.2■□□□□ 0.98
SRSF1-206ENST00000583741 PRICKLE1Q96MT3 831 aaPredicted RBP21.2■□□□□ 0.98
SRSF1-206ENST00000583741 SLC6A18Q96N87 628 aa21.2■□□□□ 0.98
SRSF1-206ENST00000583741 PABPC3Q9H361 631 aaKnown RBP21.2■□□□□ 0.98
SRSF1-206ENST00000583741 EBF2Q9HAK2 575 aa21.2■□□□□ 0.98
SRSF1-206ENST00000583741 CNGB3Q9NQW8 809 aa21.2■□□□□ 0.98
SRSF1-206ENST00000583741 APEX2Q9UBZ4 518 aa21.2■□□□□ 0.98
SRSF1-206ENST00000583741 FTSJ1Q9UET6 329 aa21.2■□□□□ 0.98
SRSF1-206ENST00000583741 SUN2Q9UH99 717 aa21.2■□□□□ 0.98
SRSF1-206ENST00000583741 A0A1B0GTQ1 180 aa21.2■□□□□ 0.98
SRSF1-206ENST00000583741 FAM47DPA6NHR8 397 aa21.2■□□□□ 0.98
SRSF1-206ENST00000583741 VILLO15195 856 aa21.2■□□□□ 0.98
SRSF1-206ENST00000583741 UCHL3P15374 230 aa21.2■□□□□ 0.98
SRSF1-206ENST00000583741 RACK1P63244 317 aaKnown RBP21.2■□□□□ 0.98
SRSF1-206ENST00000583741 ARID5BQ14865 1188 aa21.2■□□□□ 0.98
SRSF1-206ENST00000583741 USP30Q70CQ3 517 aa21.2■□□□□ 0.98
SRSF1-206ENST00000583741 GATAD2AQ86YP4 633 aa21.2■□□□□ 0.98
SRSF1-206ENST00000583741 SCML4Q8N228 414 aa21.2■□□□□ 0.98
SRSF1-206ENST00000583741 UBR7Q8N806 425 aa21.2■□□□□ 0.98
SRSF1-206ENST00000583741 TC2NQ8N9U0 490 aa21.2■□□□□ 0.98
SRSF1-206ENST00000583741 ZNF397Q8NF99 534 aaPredicted RBP21.2■□□□□ 0.98
SRSF1-206ENST00000583741 MYEOVQ96EZ4 313 aa21.2■□□□□ 0.98
SRSF1-206ENST00000583741 ACE2Q9BYF1 805 aaPredicted RBP21.2■□□□□ 0.98
SRSF1-206ENST00000583741 INTS6Q9UL03 887 aaKnown RBP21.2■□□□□ 0.98
SRSF1-206ENST00000583741 DAAM1Q9Y4D1 1078 aa21.2■□□□□ 0.98
SRSF1-206ENST00000583741 A0A1W2PPC4 97 aa21.19■□□□□ 0.98
SRSF1-206ENST00000583741 RNF225M0QZC1 329 aaPredicted RBP21.19■□□□□ 0.98
SRSF1-206ENST00000583741 CBX4O00257 560 aa21.19■□□□□ 0.98
SRSF1-206ENST00000583741 PIK3R2O00459 728 aa21.19■□□□□ 0.98
SRSF1-206ENST00000583741 SIN3BO75182 1162 aa21.19■□□□□ 0.98
SRSF1-206ENST00000583741 WNT1P04628 370 aa21.19■□□□□ 0.98
SRSF1-206ENST00000583741 SETSIPP0DME0 302 aa21.19■□□□□ 0.98
SRSF1-206ENST00000583741 KRT9P35527 623 aa21.19■□□□□ 0.98
SRSF1-206ENST00000583741 RGS7P49802 495 aa21.19■□□□□ 0.98
SRSF1-206ENST00000583741 CLDN6P56747 220 aa21.19■□□□□ 0.98
SRSF1-206ENST00000583741 ZBED6P86452 979 aa21.19■□□□□ 0.98
SRSF1-206ENST00000583741 NADSYN1Q6IA69 706 aa21.19■□□□□ 0.98
SRSF1-206ENST00000583741 NCEH1Q6PIU2 408 aa21.19■□□□□ 0.98
SRSF1-206ENST00000583741 SCUBE3Q8IX30 993 aa21.19■□□□□ 0.98
SRSF1-206ENST00000583741 GANCQ8TET4 914 aa21.19■□□□□ 0.98
SRSF1-206ENST00000583741 TTC17Q96AE7 1141 aa21.19■□□□□ 0.98
SRSF1-206ENST00000583741 TRIM44Q96DX7 344 aaPredicted RBP21.19■□□□□ 0.98
SRSF1-206ENST00000583741 MRGPRX3Q96LB0 322 aa21.19■□□□□ 0.98
SRSF1-206ENST00000583741 NLRC4Q9NPP4 1024 aa21.19■□□□□ 0.98
SRSF1-206ENST00000583741 FBXL12Q9NXK8 326 aa21.19■□□□□ 0.98
SRSF1-206ENST00000583741 STIM2Q9P246 746 aa21.19■□□□□ 0.98
SRSF1-206ENST00000583741 FHOD1Q9Y613 1164 aa21.19■□□□□ 0.98
SRSF1-206ENST00000583741 VDRP11473 427 aa21.18■□□□□ 0.98
SRSF1-206ENST00000583741 CSKP41240 450 aa21.18■□□□□ 0.98
SRSF1-206ENST00000583741 GALCP54803 685 aa21.18■□□□□ 0.98
SRSF1-206ENST00000583741 C21orf59P57076 290 aa21.18■□□□□ 0.98
SRSF1-206ENST00000583741 LRMPQ12912 555 aa21.18■□□□□ 0.98
SRSF1-206ENST00000583741 HNRNPA1L2Q32P51 320 aaKnown RBP21.18■□□□□ 0.98
SRSF1-206ENST00000583741 INAVAQ3KP66 663 aa21.18■□□□□ 0.98
SRSF1-206ENST00000583741 NUGGCQ68CJ6 796 aa21.18■□□□□ 0.98
SRSF1-206ENST00000583741 MFN1Q8IWA4 741 aa21.18■□□□□ 0.98
SRSF1-206ENST00000583741 CLEC4CQ8WTT0 213 aa21.18■□□□□ 0.98
SRSF1-206ENST00000583741 TFAP2BQ92481 460 aa21.18■□□□□ 0.98
SRSF1-206ENST00000583741 NT5C1BQ96P26 610 aa21.18■□□□□ 0.98
SRSF1-206ENST00000583741 NCKAP1Q9Y2A7 1128 aa21.18■□□□□ 0.98
SRSF1-206ENST00000583741 MYLKQ15746 1914 aa21.17■□□□□ 0.98
SRSF1-206ENST00000583741 A0A1W2PP55 124 aa21.17■□□□□ 0.98
SRSF1-206ENST00000583741 PLK4O00444 970 aa21.17■□□□□ 0.98
SRSF1-206ENST00000583741 MID1O15344 667 aa21.17■□□□□ 0.98
SRSF1-206ENST00000583741 IRAK2O43187 625 aa21.17■□□□□ 0.98
SRSF1-206ENST00000583741 ACSL4O60488 711 aa21.17■□□□□ 0.98
SRSF1-206ENST00000583741 SLC11A2P49281 568 aa21.17■□□□□ 0.98
SRSF1-206ENST00000583741 RPS24P62847 133 aaKnown RBP21.17■□□□□ 0.98
SRSF1-206ENST00000583741 SHBQ15464 509 aa21.17■□□□□ 0.98
SRSF1-206ENST00000583741 PMF1Q6P1K2 205 aa21.17■□□□□ 0.98
SRSF1-206ENST00000583741 GJB7Q6PEY0 223 aa21.17■□□□□ 0.98
SRSF1-206ENST00000583741 LRRC8AQ8IWT6 810 aa21.17■□□□□ 0.98
SRSF1-206ENST00000583741 FIBINQ8TAL6 211 aa21.17■□□□□ 0.98
SRSF1-206ENST00000583741 DCBLD2Q96PD2 775 aa21.17■□□□□ 0.98
SRSF1-206ENST00000583741 ELF4Q99607 663 aaPredicted RBP21.17■□□□□ 0.98
SRSF1-206ENST00000583741 ZSWIM1Q9BR11 485 aa21.17■□□□□ 0.98
SRSF1-206ENST00000583741 IRX2Q9BZI1 471 aaPredicted RBP21.17■□□□□ 0.98
SRSF1-206ENST00000583741 ABHD10Q9NUJ1 306 aa21.17■□□□□ 0.98
SRSF1-206ENST00000583741 SCML1Q9UN30 329 aa21.17■□□□□ 0.98
SRSF1-206ENST00000583741 C10orf142B7Z368 130 aa21.16■□□□□ 0.98
SRSF1-206ENST00000583741 WNT9AO14904 365 aa21.16■□□□□ 0.98
SRSF1-206ENST00000583741 DFNA5O60443 496 aa21.16■□□□□ 0.98
SRSF1-206ENST00000583741 DNAJC3Q13217 504 aa21.16■□□□□ 0.98
SRSF1-206ENST00000583741 RAPGEF1Q13905 1077 aa21.16■□□□□ 0.98
SRSF1-206ENST00000583741 CST6Q15828 149 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms