RNA–Protein interactions for RNA: ENST00000583548.1

NUP85-221, Transcript of nucleoporin 85, humanhuman

TSL 5

Gene NUP85, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-221ENST00000583548 PP2D1A8MPX8 630 aa6.59□□□□□ -1.35
NUP85-221ENST00000583548 MKRN2OSH3BPM6 223 aa6.59□□□□□ -1.35
NUP85-221ENST00000583548 NEBLO76041 1014 aa6.59□□□□□ -1.35
NUP85-221ENST00000583548 REC8O95072 547 aa6.59□□□□□ -1.35
NUP85-221ENST00000583548 CTDNEP1O95476 244 aa6.59□□□□□ -1.35
NUP85-221ENST00000583548 LATS1O95835 1130 aa6.59□□□□□ -1.35
NUP85-221ENST00000583548 CSF2P04141 144 aa6.59□□□□□ -1.35
NUP85-221ENST00000583548 SRPRAP08240 638 aaKnown RBP6.59□□□□□ -1.35
NUP85-221ENST00000583548 HMBSP08397 361 aa6.59□□□□□ -1.35
NUP85-221ENST00000583548 NME1P15531 152 aaKnown RBP6.59□□□□□ -1.35
NUP85-221ENST00000583548 HNRNPA2B1P22626 353 aaKnown RBP6.59□□□□□ -1.35
NUP85-221ENST00000583548 VARSP26640 1264 aaKnown RBP6.59□□□□□ -1.35
NUP85-221ENST00000583548 MZF1P28698 734 aaPredicted RBP6.59□□□□□ -1.35
NUP85-221ENST00000583548 NNMTP40261 264 aa6.59□□□□□ -1.35
NUP85-221ENST00000583548 RECQLP46063 649 aaPredicted RBP6.59□□□□□ -1.35
NUP85-221ENST00000583548 PGFP49763 221 aa6.59□□□□□ -1.35
NUP85-221ENST00000583548 WNT7BP56706 349 aa6.59□□□□□ -1.35
NUP85-221ENST00000583548 MAP3K7CLP57077 242 aa6.59□□□□□ -1.35
NUP85-221ENST00000583548 MC1RQ01726 317 aa6.59□□□□□ -1.35
NUP85-221ENST00000583548 POM121L1PQ3SYA9 428 aa6.59□□□□□ -1.35
NUP85-221ENST00000583548 PERM1Q5SV97 790 aa6.59□□□□□ -1.35
NUP85-221ENST00000583548 C9orf64Q5T6V5 341 aa6.59□□□□□ -1.35
NUP85-221ENST00000583548 RNF219Q5W0B1 726 aaPredicted RBP6.59□□□□□ -1.35
NUP85-221ENST00000583548 TCTN3Q6NUS6 607 aa6.59□□□□□ -1.35
NUP85-221ENST00000583548 PAQR9Q6ZVX9 377 aa6.59□□□□□ -1.35
NUP85-221ENST00000583548 CCDC186Q7Z3E2 898 aa6.59□□□□□ -1.35
NUP85-221ENST00000583548 PARGQ86W56 976 aa6.59□□□□□ -1.35
NUP85-221ENST00000583548 WDR49Q8IV35 697 aa6.59□□□□□ -1.35
NUP85-221ENST00000583548 CCDC117Q8IWD4 279 aaPredicted RBP6.59□□□□□ -1.35
NUP85-221ENST00000583548 ARHGAP18Q8N392 663 aa6.59□□□□□ -1.35
NUP85-221ENST00000583548 OR13H1Q8NG92 308 aa6.59□□□□□ -1.35
NUP85-221ENST00000583548 OR6C4Q8NGE1 309 aa6.59□□□□□ -1.35
NUP85-221ENST00000583548 CPT1CQ8TCG5 803 aa6.59□□□□□ -1.35
NUP85-221ENST00000583548 TTC17Q96AE7 1141 aa6.59□□□□□ -1.35
NUP85-221ENST00000583548 SAAL1Q96ER3 474 aa6.59□□□□□ -1.35
NUP85-221ENST00000583548 FIZ1Q96SL8 496 aa6.59□□□□□ -1.35
NUP85-221ENST00000583548 SMOQ99835 787 aa6.59□□□□□ -1.35
NUP85-221ENST00000583548 MMTAG2Q9BU76 263 aaKnown RBP6.59□□□□□ -1.35
NUP85-221ENST00000583548 BOCQ9BWV1 1114 aa6.59□□□□□ -1.35
NUP85-221ENST00000583548 SLC29A3Q9BZD2 475 aa6.59□□□□□ -1.35
NUP85-221ENST00000583548 MTG2Q9H4K7 406 aa6.59□□□□□ -1.35
NUP85-221ENST00000583548 CASS4Q9NQ75 786 aa6.59□□□□□ -1.35
NUP85-221ENST00000583548 PDRG1Q9NUG6 133 aa6.59□□□□□ -1.35
NUP85-221ENST00000583548 MARCH2Q9P0N8 246 aa6.59□□□□□ -1.35
NUP85-221ENST00000583548 NUDT5Q9UKK9 219 aa6.59□□□□□ -1.35
NUP85-221ENST00000583548 PADI4Q9UM07 663 aa6.59□□□□□ -1.35
NUP85-221ENST00000583548 LRBAP50851 2863 aa6.58□□□□□ -1.36
NUP85-221ENST00000583548 FBN3Q75N90 2809 aa6.58□□□□□ -1.36
NUP85-221ENST00000583548 HEATR9A2RTY3 570 aa6.58□□□□□ -1.36
NUP85-221ENST00000583548 TYW5A2RUC4 315 aaKnown RBP6.58□□□□□ -1.36
NUP85-221ENST00000583548 C1QTNF3-AMACRE9PGA6 284 aa6.58□□□□□ -1.36
NUP85-221ENST00000583548 EPB41L2O43491 1005 aaKnown RBP6.58□□□□□ -1.36
NUP85-221ENST00000583548 MOCS3O95396 460 aa6.58□□□□□ -1.36
NUP85-221ENST00000583548 STAU1O95793 577 aaKnown RBP6.58□□□□□ -1.36
NUP85-221ENST00000583548 FAM200BP0CF97 657 aa6.58□□□□□ -1.36
NUP85-221ENST00000583548 RNF224P0DH78 156 aa6.58□□□□□ -1.36
NUP85-221ENST00000583548 HGFP14210 728 aa6.58□□□□□ -1.36
NUP85-221ENST00000583548 ITGB7P26010 798 aa6.58□□□□□ -1.36
NUP85-221ENST00000583548 ATICP31939 592 aa6.58□□□□□ -1.36
NUP85-221ENST00000583548 DRD3P35462 400 aa6.58□□□□□ -1.36
NUP85-221ENST00000583548 COPB1P53618 953 aaKnown RBP6.58□□□□□ -1.36
NUP85-221ENST00000583548 EFEMP1Q12805 493 aa6.58□□□□□ -1.36
NUP85-221ENST00000583548 ANKRD1Q15327 319 aa6.58□□□□□ -1.36
NUP85-221ENST00000583548 ZXDCQ2QGD7 858 aaPredicted RBP6.58□□□□□ -1.36
NUP85-221ENST00000583548 DEFB133Q30KQ1 61 aa6.58□□□□□ -1.36
NUP85-221ENST00000583548 ADGRF1Q5T601 910 aa6.58□□□□□ -1.36
NUP85-221ENST00000583548 NUGGCQ68CJ6 796 aa6.58□□□□□ -1.36
NUP85-221ENST00000583548 ZNF720Q7Z2F6 126 aa6.58□□□□□ -1.36
NUP85-221ENST00000583548 TRAPPC11Q7Z392 1133 aa6.58□□□□□ -1.36
NUP85-221ENST00000583548 ABI3BPQ7Z7G0 1075 aa6.58□□□□□ -1.36
NUP85-221ENST00000583548 B3GNT8Q7Z7M8 397 aa6.58□□□□□ -1.36
NUP85-221ENST00000583548 SYCP3Q8IZU3 236 aa6.58□□□□□ -1.36
NUP85-221ENST00000583548 FUKQ8N0W3 1084 aa6.58□□□□□ -1.36
NUP85-221ENST00000583548 GPD1LQ8N335 351 aa6.58□□□□□ -1.36
NUP85-221ENST00000583548 TTC13Q8NBP0 860 aa6.58□□□□□ -1.36
NUP85-221ENST00000583548 ZMIZ2Q8NF64 920 aa6.58□□□□□ -1.36
NUP85-221ENST00000583548 NOC3LQ8WTT2 800 aaKnown RBP6.58□□□□□ -1.36
NUP85-221ENST00000583548 PTPRN2Q92932 1015 aa6.58□□□□□ -1.36
NUP85-221ENST00000583548 USP7Q93009 1102 aa6.58□□□□□ -1.36
NUP85-221ENST00000583548 NKD1Q969G9 470 aa6.58□□□□□ -1.36
NUP85-221ENST00000583548 SYAP1Q96A49 352 aaPredicted RBP6.58□□□□□ -1.36
NUP85-221ENST00000583548 MARVELD3Q96A59 401 aa6.58□□□□□ -1.36
NUP85-221ENST00000583548 KIAA1143Q96AT1 154 aaPredicted RBP6.58□□□□□ -1.36
NUP85-221ENST00000583548 MYO19Q96H55 970 aa6.58□□□□□ -1.36
NUP85-221ENST00000583548 SLC45A3Q96JT2 553 aa6.58□□□□□ -1.36
NUP85-221ENST00000583548 TBATAQ96M53 351 aa6.58□□□□□ -1.36
NUP85-221ENST00000583548 ACCSQ96QU6 501 aa6.58□□□□□ -1.36
NUP85-221ENST00000583548 SPAG5Q96R06 1193 aa6.58□□□□□ -1.36
NUP85-221ENST00000583548 FAM129BQ96TA1 746 aa6.58□□□□□ -1.36
NUP85-221ENST00000583548 INTS2Q9H0H0 1204 aaKnown RBP6.58□□□□□ -1.36
NUP85-221ENST00000583548 NMUR1Q9HB89 426 aa6.58□□□□□ -1.36
NUP85-221ENST00000583548 SPASTQ9UBP0 616 aa6.58□□□□□ -1.36
NUP85-221ENST00000583548 IPO11Q9UI26 975 aaKnown RBP6.58□□□□□ -1.36
NUP85-221ENST00000583548 STOML2Q9UJZ1 356 aa6.58□□□□□ -1.36
NUP85-221ENST00000583548 TP53TG5Q9Y2B4 290 aa6.58□□□□□ -1.36
NUP85-221ENST00000583548 NME7Q9Y5B8 376 aa6.58□□□□□ -1.36
NUP85-221ENST00000583548 ZFC3H1O60293 1989 aaKnown RBP6.58□□□□□ -1.36
NUP85-221ENST00000583548 SPTY2D1-AS1A0A0U1RR47 76 aa6.57□□□□□ -1.36
NUP85-221ENST00000583548 VWA3AA6NCI4 1184 aa6.57□□□□□ -1.36
NUP85-221ENST00000583548 ZNF233A6NK53 670 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms