RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 SLC16A12Q6ZSM3 486 aa4.48□□□□□ -1.69
COPS3-217ENST00000583160 STYXQ8WUJ0 223 aa4.48□□□□□ -1.69
COPS3-217ENST00000583160 HMGB4Q8WW32 186 aa4.48□□□□□ -1.69
COPS3-217ENST00000583160 NEUROG1Q92886 237 aa4.48□□□□□ -1.69
COPS3-217ENST00000583160 TMEM41AQ96HV5 264 aa4.48□□□□□ -1.69
COPS3-217ENST00000583160 URB1-AS1Q96HZ7 61 aa4.48□□□□□ -1.69
COPS3-217ENST00000583160 TMEM120AQ9BXJ8 343 aa4.48□□□□□ -1.69
COPS3-217ENST00000583160 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.48□□□□□ -1.69
COPS3-217ENST00000583160 MAGEH1Q9H213 219 aa4.48□□□□□ -1.69
COPS3-217ENST00000583160 SLCO5A1Q9H2Y9 848 aa4.48□□□□□ -1.69
COPS3-217ENST00000583160 ZNF304Q9HCX3 659 aa4.48□□□□□ -1.69
COPS3-217ENST00000583160 HIF1ANQ9NWT6 349 aa4.48□□□□□ -1.69
COPS3-217ENST00000583160 CNTN6Q9UQ52 1028 aa4.48□□□□□ -1.69
COPS3-217ENST00000583160 DTX4Q9Y2E6 619 aa4.48□□□□□ -1.69
COPS3-217ENST00000583160 FAM90A18PA6NE21 464 aa4.47□□□□□ -1.69
COPS3-217ENST00000583160 FAM90A16PA6NEW6 464 aa4.47□□□□□ -1.69
COPS3-217ENST00000583160 GOLGA6L3A6NEY3 463 aa4.47□□□□□ -1.69
COPS3-217ENST00000583160 FAM90A9PA6NNJ1 464 aa4.47□□□□□ -1.69
COPS3-217ENST00000583160 FAM90A5PA8MXJ8 464 aa4.47□□□□□ -1.69
COPS3-217ENST00000583160 PRC1O43663 620 aa4.47□□□□□ -1.69
COPS3-217ENST00000583160 FAM90A15PP0C7V4 464 aa4.47□□□□□ -1.69
COPS3-217ENST00000583160 FAM90A14PP0C7W9 464 aa4.47□□□□□ -1.69
COPS3-217ENST00000583160 PPM1AP35813 382 aa4.47□□□□□ -1.69
COPS3-217ENST00000583160 SLC16A2P36021 539 aa4.47□□□□□ -1.69
COPS3-217ENST00000583160 STAT1P42224 750 aa4.47□□□□□ -1.69
COPS3-217ENST00000583160 RASSF2P50749 326 aa4.47□□□□□ -1.69
COPS3-217ENST00000583160 SPARCL1Q14515 664 aa4.47□□□□□ -1.69
COPS3-217ENST00000583160 Q6ZTK2 550 aa4.47□□□□□ -1.69
COPS3-217ENST00000583160 TRILQ7L0X0 811 aa4.47□□□□□ -1.69
COPS3-217ENST00000583160 TMEM200AQ86VY9 491 aa4.47□□□□□ -1.69
COPS3-217ENST00000583160 KLBQ86Z14 1044 aa4.47□□□□□ -1.69
COPS3-217ENST00000583160 RBMXL3Q8N7X1 1067 aaKnown RBP4.47□□□□□ -1.69
COPS3-217ENST00000583160 PLAC1Q9HBJ0 212 aa4.47□□□□□ -1.69
COPS3-217ENST00000583160 ARFGAP3Q9NP61 516 aa4.47□□□□□ -1.69
COPS3-217ENST00000583160 PLK2Q9NYY3 685 aa4.47□□□□□ -1.69
COPS3-217ENST00000583160 CDC23Q9UJX2 597 aa4.47□□□□□ -1.69
COPS3-217ENST00000583160 MAGED2Q9UNF1 606 aaPredicted RBP4.47□□□□□ -1.69
COPS3-217ENST00000583160 BECN2A8MW95 431 aa4.46□□□□□ -1.7
COPS3-217ENST00000583160 PRSS44E7EML9 344 aa4.46□□□□□ -1.7
COPS3-217ENST00000583160 TNFRSF6BO95407 300 aa4.46□□□□□ -1.7
COPS3-217ENST00000583160 CYP1A2P05177 515 aa4.46□□□□□ -1.7
COPS3-217ENST00000583160 CPA1P15085 419 aa4.46□□□□□ -1.7
COPS3-217ENST00000583160 ROR2Q01974 943 aaKnown RBP4.46□□□□□ -1.7
COPS3-217ENST00000583160 LTBQ06643 244 aa4.46□□□□□ -1.7
COPS3-217ENST00000583160 PTK2BQ14289 1009 aa4.46□□□□□ -1.7
COPS3-217ENST00000583160 SLC4A8Q2Y0W8 1093 aa4.46□□□□□ -1.7
COPS3-217ENST00000583160 TRIM60Q495X7 471 aa4.46□□□□□ -1.7
COPS3-217ENST00000583160 GGT6Q6P531 493 aa4.46□□□□□ -1.7
COPS3-217ENST00000583160 AAGABQ6PD74 315 aa4.46□□□□□ -1.7
COPS3-217ENST00000583160 SLC25A41Q8N5S1 370 aa4.46□□□□□ -1.7
COPS3-217ENST00000583160 FAM110DQ8TAY7 271 aaPredicted RBP4.46□□□□□ -1.7
COPS3-217ENST00000583160 FAM71BQ8TC56 605 aa4.46□□□□□ -1.7
COPS3-217ENST00000583160 RSC1A1Q92681 617 aa4.46□□□□□ -1.7
COPS3-217ENST00000583160 MEIS3Q99687 375 aa4.46□□□□□ -1.7
COPS3-217ENST00000583160 OBP2BQ9NPH6 170 aa4.46□□□□□ -1.7
COPS3-217ENST00000583160 PNRC2Q9NPJ4 139 aaKnown RBP4.46□□□□□ -1.7
COPS3-217ENST00000583160 NLRC4Q9NPP4 1024 aa4.46□□□□□ -1.7
COPS3-217ENST00000583160 LIN7CQ9NUP9 197 aaKnown RBP4.46□□□□□ -1.7
COPS3-217ENST00000583160 ARL15Q9NXU5 204 aa4.46□□□□□ -1.7
COPS3-217ENST00000583160 SELENONQ9NZV5 590 aa4.46□□□□□ -1.7
COPS3-217ENST00000583160 MYO6Q9UM54 1294 aa4.46□□□□□ -1.7
COPS3-217ENST00000583160 PCDHA10Q9Y5I2 948 aa4.46□□□□□ -1.7
COPS3-217ENST00000583160 AGAP5A6NIR3 686 aa4.45□□□□□ -1.7
COPS3-217ENST00000583160 MBD3L5A6NJ08 208 aaPredicted RBP4.45□□□□□ -1.7
COPS3-217ENST00000583160 FFAR2O15552 330 aa4.45□□□□□ -1.7
COPS3-217ENST00000583160 ACAA1P09110 424 aaPredicted RBP4.45□□□□□ -1.7
COPS3-217ENST00000583160 HOXC6P09630 235 aa4.45□□□□□ -1.7
COPS3-217ENST00000583160 GYS1P13807 737 aa4.45□□□□□ -1.7
COPS3-217ENST00000583160 ARSBP15848 533 aa4.45□□□□□ -1.7
COPS3-217ENST00000583160 KLRC2P26717 231 aa4.45□□□□□ -1.7
COPS3-217ENST00000583160 RCAN1P53805 252 aa4.45□□□□□ -1.7
COPS3-217ENST00000583160 POLE2P56282 527 aa4.45□□□□□ -1.7
COPS3-217ENST00000583160 RHAGQ02094 409 aa4.45□□□□□ -1.7
COPS3-217ENST00000583160 ZBTB16Q05516 673 aa4.45□□□□□ -1.7
COPS3-217ENST00000583160 ASIC2Q16515 512 aa4.45□□□□□ -1.7
COPS3-217ENST00000583160 ATPAF1Q5TC12 328 aaPredicted RBP4.45□□□□□ -1.7
COPS3-217ENST00000583160 ZNF324BQ6AW86 544 aaPredicted RBP4.45□□□□□ -1.7
COPS3-217ENST00000583160 SLC30A9Q6PML9 568 aa4.45□□□□□ -1.7
COPS3-217ENST00000583160 ANKS1BQ7Z6G8 1248 aa4.45□□□□□ -1.7
COPS3-217ENST00000583160 IGFN1Q86VF2 1251 aa4.45□□□□□ -1.7
COPS3-217ENST00000583160 CCDC25Q86WR0 208 aa4.45□□□□□ -1.7
COPS3-217ENST00000583160 SPATA2LQ8IUW3 424 aaPredicted RBP4.45□□□□□ -1.7
COPS3-217ENST00000583160 FAM217AQ8IXS0 508 aa4.45□□□□□ -1.7
COPS3-217ENST00000583160 TMEM217Q8N7C4 229 aa4.45□□□□□ -1.7
COPS3-217ENST00000583160 KDM1BQ8NB78 822 aa4.45□□□□□ -1.7
COPS3-217ENST00000583160 ENGASEQ8NFI3 743 aa4.45□□□□□ -1.7
COPS3-217ENST00000583160 OR1N1Q8NGS0 311 aa4.45□□□□□ -1.7
COPS3-217ENST00000583160 GABPB2Q8TAK5 448 aaPredicted RBP4.45□□□□□ -1.7
COPS3-217ENST00000583160 NUDCD2Q8WVJ2 157 aa4.45□□□□□ -1.7
COPS3-217ENST00000583160 MED30Q96HR3 178 aa4.45□□□□□ -1.7
COPS3-217ENST00000583160 ELAC2Q9BQ52 826 aaKnown RBP4.45□□□□□ -1.7
COPS3-217ENST00000583160 WDR77Q9BQA1 342 aaPredicted RBP4.45□□□□□ -1.7
COPS3-217ENST00000583160 FRMD8Q9BZ67 464 aaPredicted RBP4.45□□□□□ -1.7
COPS3-217ENST00000583160 KRCC1Q9NPI7 259 aaPredicted RBP4.45□□□□□ -1.7
COPS3-217ENST00000583160 RNF146Q9NTX7 359 aa4.45□□□□□ -1.7
COPS3-217ENST00000583160 NCKIPSDQ9NZQ3 722 aa4.45□□□□□ -1.7
COPS3-217ENST00000583160 WNT16Q9UBV4 365 aa4.45□□□□□ -1.7
COPS3-217ENST00000583160 PTGDR2Q9Y5Y4 395 aa4.45□□□□□ -1.7
COPS3-217ENST00000583160 TRBV5-7A0A0A0MS05 114 aa4.44□□□□□ -1.7
COPS3-217ENST00000583160 A0A1B0GVT2 93 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms