RNA–Protein interactions for RNA: ENST00000582892.1

NF1-222, Transcript of neurofibromin 1, human

TSL 4

Gene NF1, Length 462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NF1-222	ENST00000582892	UBL4B	Q8N7F7	174 aa		7.72	□□□□□ -1.17
NF1-222	ENST00000582892	ATAD1	Q8NBU5	361 aa		7.72	□□□□□ -1.17
NF1-222	ENST00000582892	BEST2	Q8NFU1	509 aa		7.72	□□□□□ -1.17
NF1-222	ENST00000582892	SLC35G2	Q8TBE7	412 aa		7.72	□□□□□ -1.17
NF1-222	ENST00000582892	USP33	Q8TEY7	942 aa		7.72	□□□□□ -1.17
NF1-222	ENST00000582892	KIFAP3	Q92845	792 aa		7.72	□□□□□ -1.17
NF1-222	ENST00000582892	USP13	Q92995	863 aa	Predicted RBP	7.72	□□□□□ -1.17
NF1-222	ENST00000582892	ERLEC1	Q96DZ1	483 aa		7.72	□□□□□ -1.17
NF1-222	ENST00000582892	ATP6V1G3	Q96LB4	118 aa		7.72	□□□□□ -1.17
NF1-222	ENST00000582892	CCDC43	Q96MW1	224 aa	Known RBP	7.72	□□□□□ -1.17
NF1-222	ENST00000582892	NTPCR	Q9BSD7	190 aa	Known RBP	7.72	□□□□□ -1.17
NF1-222	ENST00000582892	KIFC3	Q9BVG8	833 aa		7.72	□□□□□ -1.17
NF1-222	ENST00000582892	NFKBIZ	Q9BYH8	718 aa		7.72	□□□□□ -1.17
NF1-222	ENST00000582892	SEMA4C	Q9C0C4	833 aa		7.72	□□□□□ -1.17
NF1-222	ENST00000582892	FZD8	Q9H461	694 aa		7.72	□□□□□ -1.17
NF1-222	ENST00000582892	CLMP	Q9H6B4	373 aa		7.72	□□□□□ -1.17
NF1-222	ENST00000582892	POLD4	Q9HCU8	107 aa		7.72	□□□□□ -1.17
NF1-222	ENST00000582892	OBP2A	Q9NY56	170 aa		7.72	□□□□□ -1.17
NF1-222	ENST00000582892	TBX20	Q9UMR3	447 aa		7.72	□□□□□ -1.17
NF1-222	ENST00000582892	SLC6A14	Q9UN76	642 aa		7.72	□□□□□ -1.17
NF1-222	ENST00000582892	DOPEY1	Q5JWR5	2465 aa		7.72	□□□□□ -1.17
NF1-222	ENST00000582892	USP9Y	O00507	2555 aa	Predicted RBP	7.71	□□□□□ -1.17
NF1-222	ENST00000582892	TLN1	Q9Y490	2541 aa	Known RBP	7.71	□□□□□ -1.18
NF1-222	ENST00000582892	ZNF233	A6NK53	670 aa		7.71	□□□□□ -1.18
NF1-222	ENST00000582892	TMCO5B	A8MYB1	307 aa		7.71	□□□□□ -1.18
NF1-222	ENST00000582892		H7C4K7	107 aa		7.71	□□□□□ -1.18
NF1-222	ENST00000582892		K7EQS6	105 aa		7.71	□□□□□ -1.18
NF1-222	ENST00000582892	FOXN3	O00409	490 aa	Predicted RBP	7.71	□□□□□ -1.18
NF1-222	ENST00000582892	SYN3	O14994	580 aa		7.71	□□□□□ -1.18
NF1-222	ENST00000582892	TRAPPC3	O43617	180 aa		7.71	□□□□□ -1.18
NF1-222	ENST00000582892	TLX3	O43711	291 aa	Predicted RBP	7.71	□□□□□ -1.18
NF1-222	ENST00000582892	BUB1B	O60566	1050 aa	Predicted RBP	7.71	□□□□□ -1.18
NF1-222	ENST00000582892	CBFA2T3	O75081	653 aa		7.71	□□□□□ -1.18
NF1-222	ENST00000582892	ATXN1L	P0C7T5	689 aa	Known RBP	7.71	□□□□□ -1.18
NF1-222	ENST00000582892	CTNNA2	P26232	953 aa		7.71	□□□□□ -1.18
NF1-222	ENST00000582892	ECHS1	P30084	290 aa		7.71	□□□□□ -1.18
NF1-222	ENST00000582892	EIF2S3	P41091	472 aa	Known RBP	7.71	□□□□□ -1.18
NF1-222	ENST00000582892	MXI1	P50539	228 aa		7.71	□□□□□ -1.18
NF1-222	ENST00000582892	ARSD	P51689	593 aa		7.71	□□□□□ -1.18
NF1-222	ENST00000582892	MFAP3	P55082	362 aa		7.71	□□□□□ -1.18
NF1-222	ENST00000582892	CFHR1	Q03591	330 aa		7.71	□□□□□ -1.18
NF1-222	ENST00000582892	POU5F1B	Q06416	359 aa		7.71	□□□□□ -1.18
NF1-222	ENST00000582892	PLD1	Q13393	1074 aa		7.71	□□□□□ -1.18
NF1-222	ENST00000582892	ENOX2	Q16206	610 aa	Known RBP	7.71	□□□□□ -1.18
NF1-222	ENST00000582892	ZNF468	Q5VIY5	522 aa	Predicted RBP	7.71	□□□□□ -1.18
NF1-222	ENST00000582892	PEAR1	Q5VY43	1037 aa	Predicted RBP	7.71	□□□□□ -1.18
NF1-222	ENST00000582892	CDCA2	Q69YH5	1023 aa	Predicted RBP	7.71	□□□□□ -1.18
NF1-222	ENST00000582892	PPP1R2P3	Q6NXS1	205 aa		7.71	□□□□□ -1.18
NF1-222	ENST00000582892	GJB7	Q6PEY0	223 aa		7.71	□□□□□ -1.18
NF1-222	ENST00000582892	B4GALNT4	Q76KP1	1039 aa		7.71	□□□□□ -1.18
NF1-222	ENST00000582892	LPCAT2	Q7L5N7	544 aa		7.71	□□□□□ -1.18
NF1-222	ENST00000582892	OTUD6A	Q7L8S5	288 aa		7.71	□□□□□ -1.18
NF1-222	ENST00000582892	TMEM150A	Q86TG1	271 aa		7.71	□□□□□ -1.18
NF1-222	ENST00000582892	HMGB4	Q8WW32	186 aa		7.71	□□□□□ -1.18
NF1-222	ENST00000582892	IFT81	Q8WYA0	676 aa		7.71	□□□□□ -1.18
NF1-222	ENST00000582892	SHC3	Q92529	594 aa		7.71	□□□□□ -1.18
NF1-222	ENST00000582892	SCARF2	Q96GP6	870 aa	Predicted RBP	7.71	□□□□□ -1.18
NF1-222	ENST00000582892	GDAP1L1	Q96MZ0	367 aa		7.71	□□□□□ -1.18
NF1-222	ENST00000582892	FCRL3	Q96P31	734 aa	Predicted RBP	7.71	□□□□□ -1.18
NF1-222	ENST00000582892	CCDC113	Q9H0I3	377 aa		7.71	□□□□□ -1.18
NF1-222	ENST00000582892	TASP1	Q9H6P5	420 aa		7.71	□□□□□ -1.18
NF1-222	ENST00000582892	TMBIM4	Q9HC24	238 aa		7.71	□□□□□ -1.18
NF1-222	ENST00000582892	KIAA1586	Q9HCI6	787 aa		7.71	□□□□□ -1.18
NF1-222	ENST00000582892	HSPBP1	Q9NZL4	362 aa		7.71	□□□□□ -1.18
NF1-222	ENST00000582892	UVRAG	Q9P2Y5	699 aa		7.71	□□□□□ -1.18
NF1-222	ENST00000582892	DKK4	Q9UBT3	224 aa		7.71	□□□□□ -1.18
NF1-222	ENST00000582892	RASAL2	Q9UJF2	1139 aa		7.71	□□□□□ -1.18
NF1-222	ENST00000582892	NOCT	Q9UK39	431 aa	Known RBP	7.71	□□□□□ -1.18
NF1-222	ENST00000582892	GTF3C4	Q9UKN8	822 aa		7.71	□□□□□ -1.18
NF1-222	ENST00000582892	UTP11	Q9Y3A2	253 aa	Known RBP	7.71	□□□□□ -1.18
NF1-222	ENST00000582892	RRP15	Q9Y3B9	282 aa	Known RBP	7.71	□□□□□ -1.18
NF1-222	ENST00000582892	WNT6	Q9Y6F9	365 aa		7.71	□□□□□ -1.18
NF1-222	ENST00000582892	TP53BP1	Q12888	1972 aa	Predicted RBP	7.71	□□□□□ -1.18
NF1-222	ENST00000582892	CENPE	Q02224	2701 aa		7.7	□□□□□ -1.18
NF1-222	ENST00000582892	MTMR11	A4FU01	709 aa		7.7	□□□□□ -1.18
NF1-222	ENST00000582892	SGK1	O00141	431 aa		7.7	□□□□□ -1.18
NF1-222	ENST00000582892	MYO1C	O00159	1063 aa		7.7	□□□□□ -1.18
NF1-222	ENST00000582892	PIK3R2	O00459	728 aa		7.7	□□□□□ -1.18
NF1-222	ENST00000582892	PPFIA2	O75334	1257 aa		7.7	□□□□□ -1.18
NF1-222	ENST00000582892	CYP1A2	P05177	515 aa		7.7	□□□□□ -1.18
NF1-222	ENST00000582892	SERPINF2	P08697	491 aa		7.7	□□□□□ -1.18
NF1-222	ENST00000582892	FAM153B	P0C7A2	387 aa		7.7	□□□□□ -1.18
NF1-222	ENST00000582892	MYZAP	P0CAP1	466 aa		7.7	□□□□□ -1.18
NF1-222	ENST00000582892	TRIM49	P0CI25	452 aa		7.7	□□□□□ -1.18
NF1-222	ENST00000582892	TRIM49C	P0CI26	452 aa		7.7	□□□□□ -1.18
NF1-222	ENST00000582892	ATF6	P18850	670 aa		7.7	□□□□□ -1.18
NF1-222	ENST00000582892	GART	P22102	1010 aa		7.7	□□□□□ -1.18
NF1-222	ENST00000582892	CHRNA3	P32297	505 aa		7.7	□□□□□ -1.18
NF1-222	ENST00000582892	EPHB3	P54753	998 aa		7.7	□□□□□ -1.18
NF1-222	ENST00000582892	CORO7	P57737	925 aa		7.7	□□□□□ -1.18
NF1-222	ENST00000582892	GCNT1	Q02742	428 aa		7.7	□□□□□ -1.18
NF1-222	ENST00000582892	PPP3CA	Q08209	521 aa		7.7	□□□□□ -1.18
NF1-222	ENST00000582892	DMP1	Q13316	513 aa	Predicted RBP	7.7	□□□□□ -1.18
NF1-222	ENST00000582892	PRPF4B	Q13523	1007 aa	Known RBP	7.7	□□□□□ -1.18
NF1-222	ENST00000582892	HLTF	Q14527	1009 aa	Known RBP eCLIP	7.7	□□□□□ -1.18
NF1-222	ENST00000582892	CRY1	Q16526	586 aa		7.7	□□□□□ -1.18
NF1-222	ENST00000582892	CYP1B1	Q16678	543 aa		7.7	□□□□□ -1.18
NF1-222	ENST00000582892	FAM153C	Q494X1	144 aa		7.7	□□□□□ -1.18
NF1-222	ENST00000582892	ARHGAP15	Q53QZ3	475 aa		7.7	□□□□□ -1.18
NF1-222	ENST00000582892	C1orf220	Q5T0J3	134 aa		7.7	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms