RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 KCNK9Q9NPC2 374 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 TMPRSS4Q9NRS4 437 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.54□□□□□ -0.88
SS18-220ENST00000582092 DZANK1Q9NVP4 752 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 ARHGEF38Q9NXL2 777 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 CALCOCO1Q9P1Z2 691 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 MTRRQ9UBK8 725 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 NUDT5Q9UKK9 219 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 TRHDEQ9UKU6 1024 aa9.54□□□□□ -0.88
SS18-220ENST00000582092 FARP1Q9Y4F1 1045 aaPredicted RBP9.54□□□□□ -0.88
SS18-220ENST00000582092 EYSQ5T1H1 3165 aa9.53□□□□□ -0.88
SS18-220ENST00000582092 HIDE1A8MVS5 230 aa9.53□□□□□ -0.88
SS18-220ENST00000582092 AP3B1O00203 1094 aa9.53□□□□□ -0.88
SS18-220ENST00000582092 RNF103O00237 685 aa9.53□□□□□ -0.88
SS18-220ENST00000582092 DCLK1O15075 740 aa9.53□□□□□ -0.88
SS18-220ENST00000582092 LINC01565O15544 149 aa9.53□□□□□ -0.88
SS18-220ENST00000582092 MSI1O43347 362 aaKnown RBP9.53□□□□□ -0.88
SS18-220ENST00000582092 CDH16O75309 829 aa9.53□□□□□ -0.88
SS18-220ENST00000582092 SOAT2O75908 522 aa9.53□□□□□ -0.88
SS18-220ENST00000582092 LRIG2O94898 1065 aa9.53□□□□□ -0.88
SS18-220ENST00000582092 HMBSP08397 361 aa9.53□□□□□ -0.88
SS18-220ENST00000582092 GSTA2P09210 222 aa9.53□□□□□ -0.88
SS18-220ENST00000582092 ALADP13716 330 aa9.53□□□□□ -0.88
SS18-220ENST00000582092 TPSB2P20231 275 aa9.53□□□□□ -0.88
SS18-220ENST00000582092 ATP5C1P36542 298 aaKnown RBP9.53□□□□□ -0.88
SS18-220ENST00000582092 MSH2P43246 934 aa9.53□□□□□ -0.88
SS18-220ENST00000582092 EPHB3P54753 998 aa9.53□□□□□ -0.88
SS18-220ENST00000582092 GNGT1P63211 74 aa9.53□□□□□ -0.88
SS18-220ENST00000582092 DLX2Q07687 328 aaPredicted RBP9.53□□□□□ -0.88
SS18-220ENST00000582092 SLC10A2Q12908 348 aaPredicted RBP9.53□□□□□ -0.88
SS18-220ENST00000582092 PLD1Q13393 1074 aa9.53□□□□□ -0.88
SS18-220ENST00000582092 TPSAB1Q15661 275 aa9.53□□□□□ -0.88
SS18-220ENST00000582092 SEPT7Q16181 437 aaKnown RBP9.53□□□□□ -0.88
SS18-220ENST00000582092 PARP6Q2NL67 630 aa9.53□□□□□ -0.88
SS18-220ENST00000582092 OTUD1Q5VV17 481 aaPredicted RBP9.53□□□□□ -0.88
SS18-220ENST00000582092 TIGD7Q6NT04 549 aaPredicted RBP9.53□□□□□ -0.88
SS18-220ENST00000582092 ANKRD54Q6NXT1 300 aa9.53□□□□□ -0.88
SS18-220ENST00000582092 MSANTD2Q6P1R3 559 aa9.53□□□□□ -0.88
SS18-220ENST00000582092 CASC4Q6P4E1 433 aa9.53□□□□□ -0.88
SS18-220ENST00000582092 BHLHA9Q7RTU4 235 aa9.53□□□□□ -0.88
SS18-220ENST00000582092 SCD5Q86SK9 330 aa9.53□□□□□ -0.88
SS18-220ENST00000582092 MIB1Q86YT6 1006 aa9.53□□□□□ -0.88
SS18-220ENST00000582092 LRRC49Q8IUZ0 686 aa9.53□□□□□ -0.88
SS18-220ENST00000582092 ADHFE1Q8IWW8 467 aa9.53□□□□□ -0.88
SS18-220ENST00000582092 GPR65Q8IYL9 337 aa9.53□□□□□ -0.88
SS18-220ENST00000582092 ATPAF2Q8N5M1 289 aa9.53□□□□□ -0.88
SS18-220ENST00000582092 CCDC33Q8N5R6 958 aa9.53□□□□□ -0.88
SS18-220ENST00000582092 SMRP1Q8NCR6 262 aa9.53□□□□□ -0.88
SS18-220ENST00000582092 MCUQ8NE86 351 aa9.53□□□□□ -0.88
SS18-220ENST00000582092 FBXO36Q8NEA4 188 aa9.53□□□□□ -0.88
SS18-220ENST00000582092 ZNF461Q8TAF7 563 aa9.53□□□□□ -0.88
SS18-220ENST00000582092 EPS8L3Q8TE67 593 aaKnown RBP9.53□□□□□ -0.88
SS18-220ENST00000582092 DYDC1Q8WWB3 177 aa9.53□□□□□ -0.88
SS18-220ENST00000582092 LRRC39Q96DD0 335 aa9.53□□□□□ -0.88
SS18-220ENST00000582092 CFAP36Q96G28 342 aa9.53□□□□□ -0.88
SS18-220ENST00000582092 P2RY11Q96G91 374 aa9.53□□□□□ -0.88
SS18-220ENST00000582092 MSLNLQ96KJ4 702 aa9.53□□□□□ -0.88
SS18-220ENST00000582092 BTN2A3PQ96KV6 586 aa9.53□□□□□ -0.88
SS18-220ENST00000582092 C1orf74Q96LT6 269 aa9.53□□□□□ -0.88
SS18-220ENST00000582092 NECTIN4Q96NY8 510 aa9.53□□□□□ -0.88
SS18-220ENST00000582092 NECAB3Q96P71 396 aaPredicted RBP9.53□□□□□ -0.88
SS18-220ENST00000582092 PPP1R2P1Q96PQ5 205 aa9.53□□□□□ -0.88
SS18-220ENST00000582092 LGMNQ99538 433 aa9.53□□□□□ -0.88
SS18-220ENST00000582092 HERC2P3Q9BVR0 1158 aa9.53□□□□□ -0.88
SS18-220ENST00000582092 NMUR1Q9HB89 426 aa9.53□□□□□ -0.88
SS18-220ENST00000582092 HAUS2Q9NVX0 235 aa9.53□□□□□ -0.88
SS18-220ENST00000582092 TRPM5Q9NZQ8 1165 aa9.53□□□□□ -0.88
SS18-220ENST00000582092 UXTQ9UBK9 157 aaPredicted RBP9.53□□□□□ -0.88
SS18-220ENST00000582092 AFF4Q9UHB7 1163 aaKnown RBP9.53□□□□□ -0.88
SS18-220ENST00000582092 RSPH14Q9UHP6 348 aa9.53□□□□□ -0.88
SS18-220ENST00000582092 DNMT3LQ9UJW3 386 aa9.53□□□□□ -0.88
SS18-220ENST00000582092 MAFFQ9ULX9 164 aa9.53□□□□□ -0.88
SS18-220ENST00000582092 MAD1L1Q9Y6D9 718 aa9.53□□□□□ -0.88
SS18-220ENST00000582092 TSC2P49815 1807 aa9.53□□□□□ -0.88
SS18-220ENST00000582092 UNC80Q8N2C7 3258 aa9.52□□□□□ -0.89
SS18-220ENST00000582092 ARHGAP42A6NI28 874 aa9.52□□□□□ -0.89
SS18-220ENST00000582092 KCNU1A8MYU2 1149 aa9.52□□□□□ -0.89
SS18-220ENST00000582092 FAM72CH0Y354 149 aa9.52□□□□□ -0.89
SS18-220ENST00000582092 TBC1D4O60343 1298 aa9.52□□□□□ -0.89
SS18-220ENST00000582092 TCEA3O75764 348 aa9.52□□□□□ -0.89
SS18-220ENST00000582092 RPL17P18621 184 aaKnown RBP9.52□□□□□ -0.89
SS18-220ENST00000582092 KRT15P19012 456 aa9.52□□□□□ -0.89
SS18-220ENST00000582092 STX2P32856 288 aa9.52□□□□□ -0.89
SS18-220ENST00000582092 MTHFRP42898 656 aa9.52□□□□□ -0.89
SS18-220ENST00000582092 PPP3CCP48454 512 aa9.52□□□□□ -0.89
SS18-220ENST00000582092 SLC11A2P49281 568 aa9.52□□□□□ -0.89
SS18-220ENST00000582092 HARS2P49590 506 aaKnown RBP9.52□□□□□ -0.89
SS18-220ENST00000582092 GEMIN4P57678 1058 aaKnown RBP9.52□□□□□ -0.89
SS18-220ENST00000582092 SKOR1P84550 965 aa9.52□□□□□ -0.89
SS18-220ENST00000582092 DSG1Q02413 1049 aa9.52□□□□□ -0.89
SS18-220ENST00000582092 KCNJ11Q14654 390 aa9.52□□□□□ -0.89
SS18-220ENST00000582092 PRKD1Q15139 912 aaPredicted RBP9.52□□□□□ -0.89
SS18-220ENST00000582092 TMED2Q15363 201 aa9.52□□□□□ -0.89
SS18-220ENST00000582092 ANO4Q32M45 955 aa9.52□□□□□ -0.89
SS18-220ENST00000582092 FNBP1LQ5T0N5 605 aa9.52□□□□□ -0.89
SS18-220ENST00000582092 HECTD3Q5T447 861 aa9.52□□□□□ -0.89
SS18-220ENST00000582092 SYCP2LQ5T4T6 812 aa9.52□□□□□ -0.89
SS18-220ENST00000582092 FAXCQ5TGI0 409 aa9.52□□□□□ -0.89
SS18-220ENST00000582092 FAM72AQ5TYM5 149 aa9.52□□□□□ -0.89
SS18-220ENST00000582092 ANKRD22Q5VYY1 191 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms