RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 RPL10LQ96L21 214 aaKnown RBP20.08■□□□□ 0.81
SREBF1-220ENST00000581707 NAP1L5Q96NT1 182 aaPredicted RBP20.08■□□□□ 0.81
SREBF1-220ENST00000581707 NUSAP1Q9BXS6 441 aaKnown RBP20.08■□□□□ 0.81
SREBF1-220ENST00000581707 TMPRSS4Q9NRS4 437 aa20.08■□□□□ 0.81
SREBF1-220ENST00000581707 SLCO3A1Q9UIG8 710 aa20.08■□□□□ 0.81
SREBF1-220ENST00000581707 MYO6Q9UM54 1294 aa20.08■□□□□ 0.81
SREBF1-220ENST00000581707 SNX10Q9Y5X0 201 aa20.08■□□□□ 0.81
SREBF1-220ENST00000581707 A0A1B0GTH6 734 aa20.07■□□□□ 0.8
SREBF1-220ENST00000581707 TTC34A8MYJ7 566 aa20.07■□□□□ 0.8
SREBF1-220ENST00000581707 SIN3BO75182 1162 aa20.07■□□□□ 0.8
SREBF1-220ENST00000581707 CNTN5O94779 1100 aa20.07■□□□□ 0.8
SREBF1-220ENST00000581707 SERPINC1P01008 464 aa20.07■□□□□ 0.8
SREBF1-220ENST00000581707 DNTTP04053 509 aa20.07■□□□□ 0.8
SREBF1-220ENST00000581707 CALB1P05937 261 aa20.07■□□□□ 0.8
SREBF1-220ENST00000581707 NNMTP40261 264 aa20.07■□□□□ 0.8
SREBF1-220ENST00000581707 NUMBP49757 651 aa20.07■□□□□ 0.8
SREBF1-220ENST00000581707 CDH4P55283 916 aa20.07■□□□□ 0.8
SREBF1-220ENST00000581707 C9orf64Q5T6V5 341 aa20.07■□□□□ 0.8
SREBF1-220ENST00000581707 ZNF776Q68DI1 518 aaPredicted RBP20.07■□□□□ 0.8
SREBF1-220ENST00000581707 SLC23A3Q6PIS1 610 aa20.07■□□□□ 0.8
SREBF1-220ENST00000581707 RABEPKQ7Z6M1 372 aa20.07■□□□□ 0.8
SREBF1-220ENST00000581707 FAM124AQ86V42 546 aa20.07■□□□□ 0.8
SREBF1-220ENST00000581707 FAM131BQ86XD5 332 aa20.07■□□□□ 0.8
SREBF1-220ENST00000581707 ZNF683Q8IZ20 524 aa20.07■□□□□ 0.8
SREBF1-220ENST00000581707 RGL4Q8IZJ4 473 aa20.07■□□□□ 0.8
SREBF1-220ENST00000581707 CADM4Q8NFZ8 388 aa20.07■□□□□ 0.8
SREBF1-220ENST00000581707 BAP1Q92560 729 aa20.07■□□□□ 0.8
SREBF1-220ENST00000581707 ALG14Q96F25 216 aa20.07■□□□□ 0.8
SREBF1-220ENST00000581707 HAPLN3Q96S86 360 aa20.07■□□□□ 0.8
SREBF1-220ENST00000581707 FEM1AQ9BSK4 669 aa20.07■□□□□ 0.8
SREBF1-220ENST00000581707 RSPH9Q9H1X1 276 aaPredicted RBP20.07■□□□□ 0.8
SREBF1-220ENST00000581707 CBX8Q9HC52 389 aa20.07■□□□□ 0.8
SREBF1-220ENST00000581707 TBC1D30Q9Y2I9 924 aa20.07■□□□□ 0.8
SREBF1-220ENST00000581707 NUMA1Q14980 2115 aa20.06■□□□□ 0.8
SREBF1-220ENST00000581707 ITIH6Q6UXX5 1313 aa20.06■□□□□ 0.8
SREBF1-220ENST00000581707 EDDM13A0A1B0GTR0 161 aa20.06■□□□□ 0.8
SREBF1-220ENST00000581707 A0A1W2PQC6 194 aa20.06■□□□□ 0.8
SREBF1-220ENST00000581707 TARSL2A2RTX5 802 aaKnown RBP20.06■□□□□ 0.8
SREBF1-220ENST00000581707 C2CD4BA6NLJ0 364 aa20.06■□□□□ 0.8
SREBF1-220ENST00000581707 DRGXA6NNA5 263 aa20.06■□□□□ 0.8
SREBF1-220ENST00000581707 C4orf47A7E2U8 309 aa20.06■□□□□ 0.8
SREBF1-220ENST00000581707 TM4SF5O14894 197 aa20.06■□□□□ 0.8
SREBF1-220ENST00000581707 RNASEH1O60930 286 aaKnown RBP20.06■□□□□ 0.8
SREBF1-220ENST00000581707 GJB6O95452 261 aa20.06■□□□□ 0.8
SREBF1-220ENST00000581707 CFIP05156 583 aa20.06■□□□□ 0.8
SREBF1-220ENST00000581707 KRT3P12035 628 aa20.06■□□□□ 0.8
SREBF1-220ENST00000581707 SDC4P31431 198 aa20.06■□□□□ 0.8
SREBF1-220ENST00000581707 STK19P49842 368 aaPredicted RBP20.06■□□□□ 0.8
SREBF1-220ENST00000581707 GSCP56915 257 aaPredicted RBP20.06■□□□□ 0.8
SREBF1-220ENST00000581707 CCDC14Q49A88 953 aa20.06■□□□□ 0.8
SREBF1-220ENST00000581707 WDR45BQ5MNZ6 344 aa20.06■□□□□ 0.8
SREBF1-220ENST00000581707 OR52K2Q8NGK3 314 aa20.06■□□□□ 0.8
SREBF1-220ENST00000581707 JOSD2Q8TAC2 188 aa20.06■□□□□ 0.8
SREBF1-220ENST00000581707 TMEM9BQ9NQ34 198 aa20.06■□□□□ 0.8
SREBF1-220ENST00000581707 SLC6A14Q9UN76 642 aa20.06■□□□□ 0.8
SREBF1-220ENST00000581707 OR51B4Q9Y5P0 310 aa20.06■□□□□ 0.8
SREBF1-220ENST00000581707 E9PAM4 449 aa20.05■□□□□ 0.8
SREBF1-220ENST00000581707 SERPINF2P08697 491 aa20.05■□□□□ 0.8
SREBF1-220ENST00000581707 TPM4P67936 248 aa20.05■□□□□ 0.8
SREBF1-220ENST00000581707 C1QBPQ07021 282 aaKnown RBP20.05■□□□□ 0.8
SREBF1-220ENST00000581707 NR1I3Q14994 352 aa20.05■□□□□ 0.8
SREBF1-220ENST00000581707 CDO1Q16878 200 aa20.05■□□□□ 0.8
SREBF1-220ENST00000581707 C15orf59Q2T9L4 293 aaPredicted RBP20.05■□□□□ 0.8
SREBF1-220ENST00000581707 TTC31Q49AM3 519 aaPredicted RBP20.05■□□□□ 0.8
SREBF1-220ENST00000581707 ALFQ53S48 1182 aa20.05■□□□□ 0.8
SREBF1-220ENST00000581707 MON1BQ7L1V2 547 aa20.05■□□□□ 0.8
SREBF1-220ENST00000581707 SELENOOQ9BVL4 669 aa20.05■□□□□ 0.8
SREBF1-220ENST00000581707 VPS28Q9UK41 221 aa20.05■□□□□ 0.8
SREBF1-220ENST00000581707 DOCK4Q8N1I0 1966 aa20.04■□□□□ 0.8
SREBF1-220ENST00000581707 IGLV3-10A0A075B6K4 115 aa20.04■□□□□ 0.8
SREBF1-220ENST00000581707 MED19A0JLT2 244 aaPredicted RBP20.04■□□□□ 0.8
SREBF1-220ENST00000581707 LRRC53A6NM62 1247 aa20.04■□□□□ 0.8
SREBF1-220ENST00000581707 METTL12A8MUP2 240 aa20.04■□□□□ 0.8
SREBF1-220ENST00000581707 MEI4A8MW99 385 aa20.04■□□□□ 0.8
SREBF1-220ENST00000581707 CDX4O14627 284 aaPredicted RBP20.04■□□□□ 0.8
SREBF1-220ENST00000581707 SRGAP2O75044 1071 aa20.04■□□□□ 0.8
SREBF1-220ENST00000581707 ENGP17813 658 aa20.04■□□□□ 0.8
SREBF1-220ENST00000581707 TNFAIP3P21580 790 aa20.04■□□□□ 0.8
SREBF1-220ENST00000581707 MAOBP27338 520 aa20.04■□□□□ 0.8
SREBF1-220ENST00000581707 ACSL1P33121 698 aa20.04■□□□□ 0.8
SREBF1-220ENST00000581707 RFC1P35251 1148 aaPredicted RBP20.04■□□□□ 0.8
SREBF1-220ENST00000581707 PTPN9P43378 593 aa20.04■□□□□ 0.8
SREBF1-220ENST00000581707 RAB6CQ53S08 254 aa20.04■□□□□ 0.8
SREBF1-220ENST00000581707 SH3PXD2AQ5TCZ1 1133 aa20.04■□□□□ 0.8
SREBF1-220ENST00000581707 ACAD10Q6JQN1 1059 aa20.04■□□□□ 0.8
SREBF1-220ENST00000581707 LUZP1Q86V48 1076 aa20.04■□□□□ 0.8
SREBF1-220ENST00000581707 C3orf20Q8ND61 904 aa20.04■□□□□ 0.8
SREBF1-220ENST00000581707 DNASE2BQ8WZ79 361 aa20.04■□□□□ 0.8
SREBF1-220ENST00000581707 PTPRN2Q92932 1015 aa20.04■□□□□ 0.8
SREBF1-220ENST00000581707 FAM129BQ96TA1 746 aa20.04■□□□□ 0.8
SREBF1-220ENST00000581707 RAB6CQ9H0N0 254 aa20.04■□□□□ 0.8
SREBF1-220ENST00000581707 MUC3BQ9H195 1237 aa20.04■□□□□ 0.8
SREBF1-220ENST00000581707 PCED1AQ9H1Q7 454 aa20.04■□□□□ 0.8
SREBF1-220ENST00000581707 MPP6Q9NZW5 540 aa20.04■□□□□ 0.8
SREBF1-220ENST00000581707 SUSD2Q9UGT4 822 aa20.04■□□□□ 0.8
SREBF1-220ENST00000581707 SCML1Q9UN30 329 aa20.04■□□□□ 0.8
SREBF1-220ENST00000581707 NCOR2Q9Y618 2525 aa20.04■□□□□ 0.8
SREBF1-220ENST00000581707 SIGLEC16A6NMB1 481 aa20.03■□□□□ 0.8
SREBF1-220ENST00000581707 RHOCP08134 193 aa20.03■□□□□ 0.8
SREBF1-220ENST00000581707 GNSP15586 552 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms